Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A924:X10
Extra
PDB:
ATOM 1 O3' G A 923 -99.917 33.440 0.223 1.00 13.01 O
ATOM 2 P G A 924 -100.506 34.199 1.516 1.00 7.43 P
ATOM 3 OP1 G A 924 -101.994 34.065 1.476 1.00 7.43 O
ATOM 4 OP2 G A 924 -99.906 35.553 1.520 1.00 7.43 O
ATOM 5 O5' G A 924 -99.922 33.366 2.742 1.00 7.43 O
ATOM 6 C5' G A 924 -98.698 33.743 3.361 1.00 7.43 C
ATOM 7 C4' G A 924 -98.082 32.576 4.070 1.00 7.43 C
ATOM 8 O4' G A 924 -99.028 31.472 4.081 1.00 7.43 O
ATOM 9 C3' G A 924 -96.833 31.971 3.436 1.00 7.43 C
ATOM 10 O3' G A 924 -95.646 32.675 3.740 1.00 7.43 O
ATOM 11 C2' G A 924 -96.833 30.581 4.025 1.00 7.43 C
ATOM 12 O2' G A 924 -96.346 30.616 5.363 1.00 7.43 O
ATOM 13 C1' G A 924 -98.323 30.253 4.050 1.00 7.43 C
ATOM 14 N9 G A 924 -98.722 29.486 2.864 1.00 7.44 N
ATOM 15 C8 G A 924 -99.230 29.902 1.657 1.00 7.44 C
ATOM 16 N7 G A 924 -99.454 28.910 0.811 1.00 7.44 N
ATOM 17 C5 G A 924 -99.055 27.780 1.505 1.00 7.44 C
ATOM 18 C6 G A 924 -99.044 26.413 1.122 1.00 7.44 C
ATOM 19 O6 G A 924 -99.395 25.878 0.065 1.00 7.44 O
ATOM 20 N1 G A 924 -98.554 25.611 2.131 1.00 7.44 N
ATOM 21 C2 G A 924 -98.123 26.060 3.349 1.00 7.44 C
ATOM 22 N2 G A 924 -97.679 25.095 4.181 1.00 7.44 N
ATOM 23 N3 G A 924 -98.118 27.339 3.725 1.00 7.44 N
ATOM 24 C4 G A 924 -98.595 28.131 2.760 1.00 7.44 C
ATOM 25 P G A 925 -95.134 33.847 2.786 1.00 13.17 P
ATOM 26 OP1 G A 925 -95.352 33.427 1.401 1.00 13.17 O
ATOM 27 OP2 G A 925 -93.760 34.188 3.207 1.00 13.17 O
ATOM 28 O5' G A 925 -96.129 35.028 3.146 1.00 13.17 O
TER
ATOM 1 O3' A B 9 -95.311 22.148 7.836 1.00 83.42 O
ATOM 2 P A B 10 -95.993 22.836 6.555 1.00 43.26 P
ATOM 3 OP1 A B 10 -95.124 22.506 5.380 1.00 43.26 O
ATOM 4 OP2 A B 10 -96.230 24.271 6.904 1.00 43.25 O
ATOM 5 O5' A B 10 -97.398 22.073 6.437 1.00 43.26 O
ATOM 6 C5' A B 10 -97.494 20.778 5.851 1.00 43.26 C
ATOM 7 C4' A B 10 -98.931 20.338 5.723 1.00 43.26 C
ATOM 8 O4' A B 10 -99.544 20.324 7.028 1.00 43.26 O
ATOM 9 C3' A B 10 -99.818 21.235 4.873 1.00 43.26 C
ATOM 10 O3' A B 10 -99.805 20.854 3.522 1.00 43.26 O
ATOM 11 C2' A B 10 -101.191 21.115 5.510 1.00 43.26 C
ATOM 12 O2' A B 10 -101.896 20.009 4.986 1.00 43.26 O
ATOM 13 C1' A B 10 -100.854 20.832 6.967 1.00 43.26 C
ATOM 14 N9 A B 10 -100.912 22.039 7.800 1.00 44.05 N
ATOM 15 C8 A B 10 -99.984 23.053 7.857 1.00 44.05 C
ATOM 16 N7 A B 10 -100.295 23.984 8.724 1.00 44.05 N
ATOM 17 C5 A B 10 -101.496 23.538 9.269 1.00 44.05 C
ATOM 18 C6 A B 10 -102.340 24.078 10.240 1.00 44.05 C
ATOM 19 N6 A B 10 -102.050 25.228 10.839 1.00 44.05 N
ATOM 20 N1 A B 10 -103.469 23.408 10.574 1.00 44.05 N
ATOM 21 C2 A B 10 -103.723 22.251 9.958 1.00 44.05 C
ATOM 22 N3 A B 10 -103.002 21.630 9.023 1.00 44.05 N
ATOM 23 C4 A B 10 -101.890 22.335 8.722 1.00 44.05 C
ATOM 24 P U B 11 -99.065 21.768 2.447 1.00 6.16 P
ATOM 25 OP1 U B 11 -97.687 22.015 2.959 1.00 6.16 O
ATOM 26 OP2 U B 11 -99.971 22.940 2.185 1.00 6.16 O
ATOM 27 O5' U B 11 -98.999 20.839 1.157 1.00 6.16 O
TER
ATOM 2 P G A 924 -100.506 34.199 1.516 1.00 7.43 P
ATOM 3 OP1 G A 924 -101.994 34.065 1.476 1.00 7.43 O
ATOM 4 OP2 G A 924 -99.906 35.553 1.520 1.00 7.43 O
ATOM 5 O5' G A 924 -99.922 33.366 2.742 1.00 7.43 O
ATOM 6 C5' G A 924 -98.698 33.743 3.361 1.00 7.43 C
ATOM 7 C4' G A 924 -98.082 32.576 4.070 1.00 7.43 C
ATOM 8 O4' G A 924 -99.028 31.472 4.081 1.00 7.43 O
ATOM 9 C3' G A 924 -96.833 31.971 3.436 1.00 7.43 C
ATOM 10 O3' G A 924 -95.646 32.675 3.740 1.00 7.43 O
ATOM 11 C2' G A 924 -96.833 30.581 4.025 1.00 7.43 C
ATOM 12 O2' G A 924 -96.346 30.616 5.363 1.00 7.43 O
ATOM 13 C1' G A 924 -98.323 30.253 4.050 1.00 7.43 C
ATOM 14 N9 G A 924 -98.722 29.486 2.864 1.00 7.44 N
ATOM 15 C8 G A 924 -99.230 29.902 1.657 1.00 7.44 C
ATOM 16 N7 G A 924 -99.454 28.910 0.811 1.00 7.44 N
ATOM 17 C5 G A 924 -99.055 27.780 1.505 1.00 7.44 C
ATOM 18 C6 G A 924 -99.044 26.413 1.122 1.00 7.44 C
ATOM 19 O6 G A 924 -99.395 25.878 0.065 1.00 7.44 O
ATOM 20 N1 G A 924 -98.554 25.611 2.131 1.00 7.44 N
ATOM 21 C2 G A 924 -98.123 26.060 3.349 1.00 7.44 C
ATOM 22 N2 G A 924 -97.679 25.095 4.181 1.00 7.44 N
ATOM 23 N3 G A 924 -98.118 27.339 3.725 1.00 7.44 N
ATOM 24 C4 G A 924 -98.595 28.131 2.760 1.00 7.44 C
ATOM 25 P G A 925 -95.134 33.847 2.786 1.00 13.17 P
ATOM 26 OP1 G A 925 -95.352 33.427 1.401 1.00 13.17 O
ATOM 27 OP2 G A 925 -93.760 34.188 3.207 1.00 13.17 O
ATOM 28 O5' G A 925 -96.129 35.028 3.146 1.00 13.17 O
TER
ATOM 1 O3' A B 9 -95.311 22.148 7.836 1.00 83.42 O
ATOM 2 P A B 10 -95.993 22.836 6.555 1.00 43.26 P
ATOM 3 OP1 A B 10 -95.124 22.506 5.380 1.00 43.26 O
ATOM 4 OP2 A B 10 -96.230 24.271 6.904 1.00 43.25 O
ATOM 5 O5' A B 10 -97.398 22.073 6.437 1.00 43.26 O
ATOM 6 C5' A B 10 -97.494 20.778 5.851 1.00 43.26 C
ATOM 7 C4' A B 10 -98.931 20.338 5.723 1.00 43.26 C
ATOM 8 O4' A B 10 -99.544 20.324 7.028 1.00 43.26 O
ATOM 9 C3' A B 10 -99.818 21.235 4.873 1.00 43.26 C
ATOM 10 O3' A B 10 -99.805 20.854 3.522 1.00 43.26 O
ATOM 11 C2' A B 10 -101.191 21.115 5.510 1.00 43.26 C
ATOM 12 O2' A B 10 -101.896 20.009 4.986 1.00 43.26 O
ATOM 13 C1' A B 10 -100.854 20.832 6.967 1.00 43.26 C
ATOM 14 N9 A B 10 -100.912 22.039 7.800 1.00 44.05 N
ATOM 15 C8 A B 10 -99.984 23.053 7.857 1.00 44.05 C
ATOM 16 N7 A B 10 -100.295 23.984 8.724 1.00 44.05 N
ATOM 17 C5 A B 10 -101.496 23.538 9.269 1.00 44.05 C
ATOM 18 C6 A B 10 -102.340 24.078 10.240 1.00 44.05 C
ATOM 19 N6 A B 10 -102.050 25.228 10.839 1.00 44.05 N
ATOM 20 N1 A B 10 -103.469 23.408 10.574 1.00 44.05 N
ATOM 21 C2 A B 10 -103.723 22.251 9.958 1.00 44.05 C
ATOM 22 N3 A B 10 -103.002 21.630 9.023 1.00 44.05 N
ATOM 23 C4 A B 10 -101.890 22.335 8.722 1.00 44.05 C
ATOM 24 P U B 11 -99.065 21.768 2.447 1.00 6.16 P
ATOM 25 OP1 U B 11 -97.687 22.015 2.959 1.00 6.16 O
ATOM 26 OP2 U B 11 -99.971 22.940 2.185 1.00 6.16 O
ATOM 27 O5' U B 11 -98.999 20.839 1.157 1.00 6.16 O
TER
Atoms:
OP1: (-101.994,34.065,1.476)
OP2: (-99.906,35.553,1.520)
C3': (-96.833,31.971,3.436)
C1': (-98.323,30.253,4.050)
C5': (-98.698,33.743,3.361)
O6: (-99.395,25.878,0.065)
O4': (-99.028,31.472,4.081)
C8: (-99.230,29.902,1.657)
C2: (-98.123,26.060,3.349)
C6: (-99.044,26.413,1.122)
C5: (-99.055,27.780,1.505)
C4: (-98.595,28.131,2.760)
P: (-100.506,34.199,1.516)
C4': (-98.082,32.576,4.070)
C2': (-96.833,30.581,4.025)
O2': (-96.346,30.616,5.363)
N1: (-98.554,25.611,2.131)
N2: (-97.679,25.095,4.181)
N3: (-98.118,27.339,3.725)
N7: (-99.454,28.910,0.811)
N9: (-98.722,29.486,2.864)
O5': (-99.922,33.366,2.742)
O3': (-95.646,32.675,3.740)
OP2: (-99.906,35.553,1.520)
C3': (-96.833,31.971,3.436)
C1': (-98.323,30.253,4.050)
C5': (-98.698,33.743,3.361)
O6: (-99.395,25.878,0.065)
O4': (-99.028,31.472,4.081)
C8: (-99.230,29.902,1.657)
C2: (-98.123,26.060,3.349)
C6: (-99.044,26.413,1.122)
C5: (-99.055,27.780,1.505)
C4: (-98.595,28.131,2.760)
P: (-100.506,34.199,1.516)
C4': (-98.082,32.576,4.070)
C2': (-96.833,30.581,4.025)
O2': (-96.346,30.616,5.363)
N1: (-98.554,25.611,2.131)
N2: (-97.679,25.095,4.181)
N3: (-98.118,27.339,3.725)
N7: (-99.454,28.910,0.811)
N9: (-98.722,29.486,2.864)
O5': (-99.922,33.366,2.742)
O3': (-95.646,32.675,3.740)
OP1: (-95.124,22.506,5.380)
OP2: (-96.230,24.271,6.904)
C3': (-99.818,21.235,4.873)
C1': (-100.854,20.832,6.967)
C5': (-97.494,20.778,5.851)
O4': (-99.544,20.324,7.028)
C8: (-99.984,23.053,7.857)
O2': (-101.896,20.009,4.986)
C6: (-102.340,24.078,10.240)
C5: (-101.496,23.538,9.269)
C4: (-101.890,22.335,8.722)
P: (-95.993,22.836,6.555)
C4': (-98.931,20.338,5.723)
C2': (-101.191,21.115,5.510)
C2: (-103.723,22.251,9.958)
N1: (-103.469,23.408,10.574)
N3: (-103.002,21.630,9.023)
N6: (-102.050,25.228,10.839)
N7: (-100.295,23.984,8.724)
N9: (-100.912,22.039,7.800)
O5': (-97.398,22.073,6.437)
O3': (-99.805,20.854,3.522)
OP2: (-96.230,24.271,6.904)
C3': (-99.818,21.235,4.873)
C1': (-100.854,20.832,6.967)
C5': (-97.494,20.778,5.851)
O4': (-99.544,20.324,7.028)
C8: (-99.984,23.053,7.857)
O2': (-101.896,20.009,4.986)
C6: (-102.340,24.078,10.240)
C5: (-101.496,23.538,9.269)
C4: (-101.890,22.335,8.722)
P: (-95.993,22.836,6.555)
C4': (-98.931,20.338,5.723)
C2': (-101.191,21.115,5.510)
C2: (-103.723,22.251,9.958)
N1: (-103.469,23.408,10.574)
N3: (-103.002,21.630,9.023)
N6: (-102.050,25.228,10.839)
N7: (-100.295,23.984,8.724)
N9: (-100.912,22.039,7.800)
O5': (-97.398,22.073,6.437)
O3': (-99.805,20.854,3.522)
Image (generated by PyMOL):