Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11187:11215
Extra
PDB:
ATOM 1 O3' G A1186 -31.017 -0.303 -18.706 1.00232.89 O
ATOM 2 P G A1187 -30.589 -1.259 -19.933 1.00301.24 P
ATOM 3 OP1 G A1187 -31.825 -1.581 -20.690 1.00302.25 O
ATOM 4 OP2 G A1187 -29.798 -2.372 -19.363 1.00300.73 O
ATOM 5 O5' G A1187 -29.648 -0.311 -20.808 1.00300.39 O
ATOM 6 C5' G A1187 -28.341 -0.724 -21.187 1.00299.38 C
ATOM 7 C4' G A1187 -27.297 0.294 -20.786 1.00298.46 C
ATOM 8 O4' G A1187 -27.569 0.767 -19.435 1.00298.66 O
ATOM 9 C3' G A1187 -25.858 -0.214 -20.717 1.00297.37 C
ATOM 10 O3' G A1187 -25.205 -0.268 -21.984 1.00296.84 O
ATOM 11 C2' G A1187 -25.223 0.755 -19.726 1.00296.79 C
ATOM 12 O2' G A1187 -24.995 2.021 -20.330 1.00296.48 O
ATOM 13 C1' G A1187 -26.359 0.906 -18.718 1.00297.69 C
ATOM 14 N9 G A1187 -26.309 -0.152 -17.688 1.00297.77 N
ATOM 15 C8 G A1187 -27.183 -1.206 -17.546 1.00298.57 C
ATOM 16 N7 G A1187 -26.884 -2.004 -16.557 1.00298.42 N
ATOM 17 C5 G A1187 -25.736 -1.446 -16.013 1.00297.46 C
ATOM 18 C6 G A1187 -24.949 -1.872 -14.912 1.00296.89 C
ATOM 19 O6 G A1187 -25.119 -2.856 -14.179 1.00297.13 O
ATOM 20 N1 G A1187 -23.871 -1.014 -14.703 1.00295.96 N
ATOM 21 C2 G A1187 -23.583 0.108 -15.448 1.00295.61 C
ATOM 22 N2 G A1187 -22.493 0.804 -15.083 1.00294.69 N
ATOM 23 N3 G A1187 -24.310 0.514 -16.478 1.00296.14 N
ATOM 24 C4 G A1187 -25.363 -0.305 -16.700 1.00297.05 C
ATOM 25 P A A1188 -24.505 -1.639 -22.492 1.00323.87 P
ATOM 26 OP1 A A1188 -24.369 -1.540 -23.968 1.00323.74 O
ATOM 27 OP2 A A1188 -25.286 -2.768 -21.927 1.00324.61 O
ATOM 28 O5' A A1188 -23.060 -1.586 -21.812 1.00322.73 O
TER
ATOM 1 O3' A B1214 -22.588 6.223 -15.366 1.00251.30 O
ATOM 2 P A B1215 -22.044 4.851 -16.013 1.00262.35 P
ATOM 3 OP1 A B1215 -22.951 3.765 -15.563 1.00263.18 O
ATOM 4 OP2 A B1215 -20.600 4.756 -15.682 1.00261.22 O
ATOM 5 O5' A B1215 -22.223 5.096 -17.580 1.00262.45 O
ATOM 6 C5' A B1215 -21.485 4.335 -18.529 1.00261.92 C
ATOM 7 C4' A B1215 -22.313 4.018 -19.750 1.00262.59 C
ATOM 8 O4' A B1215 -23.162 5.148 -20.071 1.00263.15 O
ATOM 9 C3' A B1215 -21.542 3.753 -21.039 1.00261.98 C
ATOM 10 O3' A B1215 -21.034 2.422 -21.122 1.00261.70 O
ATOM 11 C2' A B1215 -22.568 4.088 -22.121 1.00262.75 C
ATOM 12 O2' A B1215 -23.445 2.992 -22.338 1.00263.54 O
ATOM 13 C1' A B1215 -23.367 5.221 -21.466 1.00263.29 C
ATOM 14 N9 A B1215 -22.956 6.562 -21.943 1.00262.84 N
ATOM 15 C8 A B1215 -21.916 7.343 -21.499 1.00261.95 C
ATOM 16 N7 A B1215 -21.816 8.500 -22.116 1.00261.77 N
ATOM 17 C5 A B1215 -22.865 8.492 -23.030 1.00262.59 C
ATOM 18 C6 A B1215 -23.312 9.428 -23.989 1.00262.85 C
ATOM 19 N6 A B1215 -22.738 10.614 -24.209 1.00262.29 N
ATOM 20 N1 A B1215 -24.391 9.108 -24.735 1.00263.72 N
ATOM 21 C2 A B1215 -24.976 7.925 -24.532 1.00264.28 C
ATOM 22 N3 A B1215 -24.657 6.966 -23.664 1.00264.13 N
ATOM 23 C4 A B1215 -23.577 7.307 -22.932 1.00263.25 C
ATOM 24 P C B1216 -19.703 2.096 -21.982 1.00244.17 P
ATOM 25 OP1 C B1216 -19.702 0.633 -22.256 1.00244.30 O
ATOM 26 OP2 C B1216 -18.554 2.683 -21.252 1.00243.22 O
ATOM 27 O5' C B1216 -19.951 2.897 -23.337 1.00244.28 O
TER
ATOM 2 P G A1187 -30.589 -1.259 -19.933 1.00301.24 P
ATOM 3 OP1 G A1187 -31.825 -1.581 -20.690 1.00302.25 O
ATOM 4 OP2 G A1187 -29.798 -2.372 -19.363 1.00300.73 O
ATOM 5 O5' G A1187 -29.648 -0.311 -20.808 1.00300.39 O
ATOM 6 C5' G A1187 -28.341 -0.724 -21.187 1.00299.38 C
ATOM 7 C4' G A1187 -27.297 0.294 -20.786 1.00298.46 C
ATOM 8 O4' G A1187 -27.569 0.767 -19.435 1.00298.66 O
ATOM 9 C3' G A1187 -25.858 -0.214 -20.717 1.00297.37 C
ATOM 10 O3' G A1187 -25.205 -0.268 -21.984 1.00296.84 O
ATOM 11 C2' G A1187 -25.223 0.755 -19.726 1.00296.79 C
ATOM 12 O2' G A1187 -24.995 2.021 -20.330 1.00296.48 O
ATOM 13 C1' G A1187 -26.359 0.906 -18.718 1.00297.69 C
ATOM 14 N9 G A1187 -26.309 -0.152 -17.688 1.00297.77 N
ATOM 15 C8 G A1187 -27.183 -1.206 -17.546 1.00298.57 C
ATOM 16 N7 G A1187 -26.884 -2.004 -16.557 1.00298.42 N
ATOM 17 C5 G A1187 -25.736 -1.446 -16.013 1.00297.46 C
ATOM 18 C6 G A1187 -24.949 -1.872 -14.912 1.00296.89 C
ATOM 19 O6 G A1187 -25.119 -2.856 -14.179 1.00297.13 O
ATOM 20 N1 G A1187 -23.871 -1.014 -14.703 1.00295.96 N
ATOM 21 C2 G A1187 -23.583 0.108 -15.448 1.00295.61 C
ATOM 22 N2 G A1187 -22.493 0.804 -15.083 1.00294.69 N
ATOM 23 N3 G A1187 -24.310 0.514 -16.478 1.00296.14 N
ATOM 24 C4 G A1187 -25.363 -0.305 -16.700 1.00297.05 C
ATOM 25 P A A1188 -24.505 -1.639 -22.492 1.00323.87 P
ATOM 26 OP1 A A1188 -24.369 -1.540 -23.968 1.00323.74 O
ATOM 27 OP2 A A1188 -25.286 -2.768 -21.927 1.00324.61 O
ATOM 28 O5' A A1188 -23.060 -1.586 -21.812 1.00322.73 O
TER
ATOM 1 O3' A B1214 -22.588 6.223 -15.366 1.00251.30 O
ATOM 2 P A B1215 -22.044 4.851 -16.013 1.00262.35 P
ATOM 3 OP1 A B1215 -22.951 3.765 -15.563 1.00263.18 O
ATOM 4 OP2 A B1215 -20.600 4.756 -15.682 1.00261.22 O
ATOM 5 O5' A B1215 -22.223 5.096 -17.580 1.00262.45 O
ATOM 6 C5' A B1215 -21.485 4.335 -18.529 1.00261.92 C
ATOM 7 C4' A B1215 -22.313 4.018 -19.750 1.00262.59 C
ATOM 8 O4' A B1215 -23.162 5.148 -20.071 1.00263.15 O
ATOM 9 C3' A B1215 -21.542 3.753 -21.039 1.00261.98 C
ATOM 10 O3' A B1215 -21.034 2.422 -21.122 1.00261.70 O
ATOM 11 C2' A B1215 -22.568 4.088 -22.121 1.00262.75 C
ATOM 12 O2' A B1215 -23.445 2.992 -22.338 1.00263.54 O
ATOM 13 C1' A B1215 -23.367 5.221 -21.466 1.00263.29 C
ATOM 14 N9 A B1215 -22.956 6.562 -21.943 1.00262.84 N
ATOM 15 C8 A B1215 -21.916 7.343 -21.499 1.00261.95 C
ATOM 16 N7 A B1215 -21.816 8.500 -22.116 1.00261.77 N
ATOM 17 C5 A B1215 -22.865 8.492 -23.030 1.00262.59 C
ATOM 18 C6 A B1215 -23.312 9.428 -23.989 1.00262.85 C
ATOM 19 N6 A B1215 -22.738 10.614 -24.209 1.00262.29 N
ATOM 20 N1 A B1215 -24.391 9.108 -24.735 1.00263.72 N
ATOM 21 C2 A B1215 -24.976 7.925 -24.532 1.00264.28 C
ATOM 22 N3 A B1215 -24.657 6.966 -23.664 1.00264.13 N
ATOM 23 C4 A B1215 -23.577 7.307 -22.932 1.00263.25 C
ATOM 24 P C B1216 -19.703 2.096 -21.982 1.00244.17 P
ATOM 25 OP1 C B1216 -19.702 0.633 -22.256 1.00244.30 O
ATOM 26 OP2 C B1216 -18.554 2.683 -21.252 1.00243.22 O
ATOM 27 O5' C B1216 -19.951 2.897 -23.337 1.00244.28 O
TER
Atoms:
OP1: (-31.825,-1.581,-20.690)
OP2: (-29.798,-2.372,-19.363)
C3': (-25.858,-0.214,-20.717)
C1': (-26.359,0.906,-18.718)
C5': (-28.341,-0.724,-21.187)
O6: (-25.119,-2.856,-14.179)
O4': (-27.569,0.767,-19.435)
C8: (-27.183,-1.206,-17.546)
C2: (-23.583,0.108,-15.448)
C6: (-24.949,-1.872,-14.912)
C5: (-25.736,-1.446,-16.013)
C4: (-25.363,-0.305,-16.700)
P: (-30.589,-1.259,-19.933)
C4': (-27.297,0.294,-20.786)
C2': (-25.223,0.755,-19.726)
O2': (-24.995,2.021,-20.330)
N1: (-23.871,-1.014,-14.703)
N2: (-22.493,0.804,-15.083)
N3: (-24.310,0.514,-16.478)
N7: (-26.884,-2.004,-16.557)
N9: (-26.309,-0.152,-17.688)
O5': (-29.648,-0.311,-20.808)
O3': (-25.205,-0.268,-21.984)
OP2: (-29.798,-2.372,-19.363)
C3': (-25.858,-0.214,-20.717)
C1': (-26.359,0.906,-18.718)
C5': (-28.341,-0.724,-21.187)
O6: (-25.119,-2.856,-14.179)
O4': (-27.569,0.767,-19.435)
C8: (-27.183,-1.206,-17.546)
C2: (-23.583,0.108,-15.448)
C6: (-24.949,-1.872,-14.912)
C5: (-25.736,-1.446,-16.013)
C4: (-25.363,-0.305,-16.700)
P: (-30.589,-1.259,-19.933)
C4': (-27.297,0.294,-20.786)
C2': (-25.223,0.755,-19.726)
O2': (-24.995,2.021,-20.330)
N1: (-23.871,-1.014,-14.703)
N2: (-22.493,0.804,-15.083)
N3: (-24.310,0.514,-16.478)
N7: (-26.884,-2.004,-16.557)
N9: (-26.309,-0.152,-17.688)
O5': (-29.648,-0.311,-20.808)
O3': (-25.205,-0.268,-21.984)
OP1: (-22.951,3.765,-15.563)
OP2: (-20.600,4.756,-15.682)
C3': (-21.542,3.753,-21.039)
C1': (-23.367,5.221,-21.466)
C5': (-21.485,4.335,-18.529)
O4': (-23.162,5.148,-20.071)
C8: (-21.916,7.343,-21.499)
O2': (-23.445,2.992,-22.338)
C6: (-23.312,9.428,-23.989)
C5: (-22.865,8.492,-23.030)
C4: (-23.577,7.307,-22.932)
P: (-22.044,4.851,-16.013)
C4': (-22.313,4.018,-19.750)
C2': (-22.568,4.088,-22.121)
C2: (-24.976,7.925,-24.532)
N1: (-24.391,9.108,-24.735)
N3: (-24.657,6.966,-23.664)
N6: (-22.738,10.614,-24.209)
N7: (-21.816,8.500,-22.116)
N9: (-22.956,6.562,-21.943)
O5': (-22.223,5.096,-17.580)
O3': (-21.034,2.422,-21.122)
OP2: (-20.600,4.756,-15.682)
C3': (-21.542,3.753,-21.039)
C1': (-23.367,5.221,-21.466)
C5': (-21.485,4.335,-18.529)
O4': (-23.162,5.148,-20.071)
C8: (-21.916,7.343,-21.499)
O2': (-23.445,2.992,-22.338)
C6: (-23.312,9.428,-23.989)
C5: (-22.865,8.492,-23.030)
C4: (-23.577,7.307,-22.932)
P: (-22.044,4.851,-16.013)
C4': (-22.313,4.018,-19.750)
C2': (-22.568,4.088,-22.121)
C2: (-24.976,7.925,-24.532)
N1: (-24.391,9.108,-24.735)
N3: (-24.657,6.966,-23.664)
N6: (-22.738,10.614,-24.209)
N7: (-21.816,8.500,-22.116)
N9: (-22.956,6.562,-21.943)
O5': (-22.223,5.096,-17.580)
O3': (-21.034,2.422,-21.122)
Image (generated by PyMOL):