Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1EXD:B30:B31
Extra
PDB:
ATOM 1 O3' U A 29 10.303 -9.521 18.898 1.00 8.00 O
ATOM 2 P U A 30 11.354 -10.733 18.894 1.00 15.00 P
ATOM 3 OP1 U A 30 10.937 -11.733 17.880 1.00 8.00 O
ATOM 4 OP2 U A 30 11.565 -11.153 20.307 1.00 8.00 O
ATOM 5 O5' U A 30 12.694 -10.052 18.378 1.00 8.00 O
ATOM 6 C5' U A 30 12.843 -9.668 17.002 1.00 6.00 C
ATOM 7 C4' U A 30 14.288 -9.354 16.718 1.00 6.00 C
ATOM 8 O4' U A 30 14.653 -8.109 17.368 1.00 8.00 O
ATOM 9 C3' U A 30 15.268 -10.367 17.283 1.00 6.00 C
ATOM 10 O3' U A 30 15.397 -11.497 16.426 1.00 8.00 O
ATOM 11 C2' U A 30 16.542 -9.540 17.389 1.00 6.00 C
ATOM 12 O2' U A 30 17.188 -9.364 16.144 1.00 8.00 O
ATOM 13 C1' U A 30 15.977 -8.202 17.866 1.00 6.00 C
ATOM 14 N1 U A 30 15.916 -8.109 19.329 1.00 7.00 N
ATOM 15 C2 U A 30 17.036 -7.654 19.991 1.00 6.00 C
ATOM 16 O2 U A 30 18.061 -7.336 19.417 1.00 8.00 O
ATOM 17 N3 U A 30 16.914 -7.587 21.356 1.00 7.00 N
ATOM 18 C4 U A 30 15.809 -7.926 22.109 1.00 6.00 C
ATOM 19 O4 U A 30 15.864 -7.849 23.340 1.00 8.00 O
ATOM 20 C5 U A 30 14.693 -8.388 21.347 1.00 6.00 C
ATOM 21 C6 U A 30 14.784 -8.463 20.017 1.00 6.00 C
ATOM 22 P C A 31 15.005 -12.960 16.972 1.00 15.00 P
ATOM 23 OP1 C A 31 14.182 -13.603 15.924 1.00 8.00 O
ATOM 24 OP2 C A 31 14.460 -12.829 18.354 1.00 8.00 O
ATOM 25 O5' C A 31 16.402 -13.722 17.043 1.00 8.00 O
TER
ATOM 1 O3' U B 30 15.397 -11.497 16.426 1.00 8.00 O
ATOM 2 P C B 31 15.005 -12.960 16.972 1.00 15.00 P
ATOM 3 OP1 C B 31 14.182 -13.603 15.924 1.00 8.00 O
ATOM 4 OP2 C B 31 14.460 -12.829 18.354 1.00 8.00 O
ATOM 5 O5' C B 31 16.402 -13.722 17.043 1.00 8.00 O
ATOM 6 C5' C B 31 17.266 -13.597 18.193 1.00 6.00 C
ATOM 7 C4' C B 31 18.702 -13.840 17.788 1.00 6.00 C
ATOM 8 O4' C B 31 18.811 -15.109 17.119 1.00 8.00 O
ATOM 9 C3' C B 31 19.304 -12.823 16.816 1.00 6.00 C
ATOM 10 O3' C B 31 20.179 -11.963 17.575 1.00 8.00 O
ATOM 11 C2' C B 31 20.216 -13.648 15.889 1.00 6.00 C
ATOM 12 O2' C B 31 21.571 -13.327 16.052 1.00 8.00 O
ATOM 13 C1' C B 31 19.996 -15.079 16.382 1.00 6.00 C
ATOM 14 N1 C B 31 20.094 -16.238 15.480 1.00 7.00 N
ATOM 15 C2 C B 31 21.386 -16.668 15.086 1.00 6.00 C
ATOM 16 O2 C B 31 22.382 -16.009 15.434 1.00 95.25 O
ATOM 17 N3 C B 31 21.511 -17.785 14.340 1.00 7.00 N
ATOM 18 C4 C B 31 20.425 -18.467 13.975 1.00 6.00 C
ATOM 19 N4 C B 31 20.612 -19.590 13.269 1.00 7.00 N
ATOM 20 C5 C B 31 19.100 -18.033 14.320 1.00 6.00 C
ATOM 21 C6 C B 31 18.984 -16.920 15.062 1.00 6.00 C
ATOM 22 P U B 32 19.733 -10.477 17.988 1.00 96.74 P
ATOM 23 OP1 U B 32 18.611 -10.545 18.967 1.00 96.17 O
ATOM 24 OP2 U B 32 19.562 -9.708 16.724 1.00 97.10 O
ATOM 25 O5' U B 32 21.019 -9.910 18.749 1.00 92.68 O
TER
ATOM 2 P U A 30 11.354 -10.733 18.894 1.00 15.00 P
ATOM 3 OP1 U A 30 10.937 -11.733 17.880 1.00 8.00 O
ATOM 4 OP2 U A 30 11.565 -11.153 20.307 1.00 8.00 O
ATOM 5 O5' U A 30 12.694 -10.052 18.378 1.00 8.00 O
ATOM 6 C5' U A 30 12.843 -9.668 17.002 1.00 6.00 C
ATOM 7 C4' U A 30 14.288 -9.354 16.718 1.00 6.00 C
ATOM 8 O4' U A 30 14.653 -8.109 17.368 1.00 8.00 O
ATOM 9 C3' U A 30 15.268 -10.367 17.283 1.00 6.00 C
ATOM 10 O3' U A 30 15.397 -11.497 16.426 1.00 8.00 O
ATOM 11 C2' U A 30 16.542 -9.540 17.389 1.00 6.00 C
ATOM 12 O2' U A 30 17.188 -9.364 16.144 1.00 8.00 O
ATOM 13 C1' U A 30 15.977 -8.202 17.866 1.00 6.00 C
ATOM 14 N1 U A 30 15.916 -8.109 19.329 1.00 7.00 N
ATOM 15 C2 U A 30 17.036 -7.654 19.991 1.00 6.00 C
ATOM 16 O2 U A 30 18.061 -7.336 19.417 1.00 8.00 O
ATOM 17 N3 U A 30 16.914 -7.587 21.356 1.00 7.00 N
ATOM 18 C4 U A 30 15.809 -7.926 22.109 1.00 6.00 C
ATOM 19 O4 U A 30 15.864 -7.849 23.340 1.00 8.00 O
ATOM 20 C5 U A 30 14.693 -8.388 21.347 1.00 6.00 C
ATOM 21 C6 U A 30 14.784 -8.463 20.017 1.00 6.00 C
ATOM 22 P C A 31 15.005 -12.960 16.972 1.00 15.00 P
ATOM 23 OP1 C A 31 14.182 -13.603 15.924 1.00 8.00 O
ATOM 24 OP2 C A 31 14.460 -12.829 18.354 1.00 8.00 O
ATOM 25 O5' C A 31 16.402 -13.722 17.043 1.00 8.00 O
TER
ATOM 1 O3' U B 30 15.397 -11.497 16.426 1.00 8.00 O
ATOM 2 P C B 31 15.005 -12.960 16.972 1.00 15.00 P
ATOM 3 OP1 C B 31 14.182 -13.603 15.924 1.00 8.00 O
ATOM 4 OP2 C B 31 14.460 -12.829 18.354 1.00 8.00 O
ATOM 5 O5' C B 31 16.402 -13.722 17.043 1.00 8.00 O
ATOM 6 C5' C B 31 17.266 -13.597 18.193 1.00 6.00 C
ATOM 7 C4' C B 31 18.702 -13.840 17.788 1.00 6.00 C
ATOM 8 O4' C B 31 18.811 -15.109 17.119 1.00 8.00 O
ATOM 9 C3' C B 31 19.304 -12.823 16.816 1.00 6.00 C
ATOM 10 O3' C B 31 20.179 -11.963 17.575 1.00 8.00 O
ATOM 11 C2' C B 31 20.216 -13.648 15.889 1.00 6.00 C
ATOM 12 O2' C B 31 21.571 -13.327 16.052 1.00 8.00 O
ATOM 13 C1' C B 31 19.996 -15.079 16.382 1.00 6.00 C
ATOM 14 N1 C B 31 20.094 -16.238 15.480 1.00 7.00 N
ATOM 15 C2 C B 31 21.386 -16.668 15.086 1.00 6.00 C
ATOM 16 O2 C B 31 22.382 -16.009 15.434 1.00 95.25 O
ATOM 17 N3 C B 31 21.511 -17.785 14.340 1.00 7.00 N
ATOM 18 C4 C B 31 20.425 -18.467 13.975 1.00 6.00 C
ATOM 19 N4 C B 31 20.612 -19.590 13.269 1.00 7.00 N
ATOM 20 C5 C B 31 19.100 -18.033 14.320 1.00 6.00 C
ATOM 21 C6 C B 31 18.984 -16.920 15.062 1.00 6.00 C
ATOM 22 P U B 32 19.733 -10.477 17.988 1.00 96.74 P
ATOM 23 OP1 U B 32 18.611 -10.545 18.967 1.00 96.17 O
ATOM 24 OP2 U B 32 19.562 -9.708 16.724 1.00 97.10 O
ATOM 25 O5' U B 32 21.019 -9.910 18.749 1.00 92.68 O
TER
Atoms:
C4: (15.809,-7.926,22.109)
N3: (16.914,-7.587,21.356)
OP1: (10.937,-11.733,17.880)
OP2: (11.565,-11.153,20.307)
C2: (17.036,-7.654,19.991)
C1': (15.977,-8.202,17.866)
C3': (15.268,-10.367,17.283)
O5': (12.694,-10.052,18.378)
O4': (14.653,-8.109,17.368)
C5': (12.843,-9.668,17.002)
P: (11.354,-10.733,18.894)
C4': (14.288,-9.354,16.718)
C2': (16.542,-9.540,17.389)
O2': (17.188,-9.364,16.144)
N1: (15.916,-8.109,19.329)
O4: (15.864,-7.849,23.340)
O2: (18.061,-7.336,19.417)
C6: (14.784,-8.463,20.017)
C5: (14.693,-8.388,21.347)
O3': (15.397,-11.497,16.426)
N3: (16.914,-7.587,21.356)
OP1: (10.937,-11.733,17.880)
OP2: (11.565,-11.153,20.307)
C2: (17.036,-7.654,19.991)
C1': (15.977,-8.202,17.866)
C3': (15.268,-10.367,17.283)
O5': (12.694,-10.052,18.378)
O4': (14.653,-8.109,17.368)
C5': (12.843,-9.668,17.002)
P: (11.354,-10.733,18.894)
C4': (14.288,-9.354,16.718)
C2': (16.542,-9.540,17.389)
O2': (17.188,-9.364,16.144)
N1: (15.916,-8.109,19.329)
O4: (15.864,-7.849,23.340)
O2: (18.061,-7.336,19.417)
C6: (14.784,-8.463,20.017)
C5: (14.693,-8.388,21.347)
O3': (15.397,-11.497,16.426)
C2: (21.386,-16.668,15.086)
OP1: (14.182,-13.603,15.924)
OP2: (14.460,-12.829,18.354)
C4: (20.425,-18.467,13.975)
O5': (16.402,-13.722,17.043)
C3': (19.304,-12.823,16.816)
C1': (19.996,-15.079,16.382)
O4': (18.811,-15.109,17.119)
C5': (17.266,-13.597,18.193)
P: (15.005,-12.960,16.972)
O2: (22.382,-16.009,15.434)
C4': (18.702,-13.840,17.788)
C2': (20.216,-13.648,15.889)
O2': (21.571,-13.327,16.052)
N1: (20.094,-16.238,15.480)
N3: (21.511,-17.785,14.340)
N4: (20.612,-19.590,13.269)
C6: (18.984,-16.920,15.062)
C5: (19.100,-18.033,14.320)
O3': (20.179,-11.963,17.575)
OP1: (14.182,-13.603,15.924)
OP2: (14.460,-12.829,18.354)
C4: (20.425,-18.467,13.975)
O5': (16.402,-13.722,17.043)
C3': (19.304,-12.823,16.816)
C1': (19.996,-15.079,16.382)
O4': (18.811,-15.109,17.119)
C5': (17.266,-13.597,18.193)
P: (15.005,-12.960,16.972)
O2: (22.382,-16.009,15.434)
C4': (18.702,-13.840,17.788)
C2': (20.216,-13.648,15.889)
O2': (21.571,-13.327,16.052)
N1: (20.094,-16.238,15.480)
N3: (21.511,-17.785,14.340)
N4: (20.612,-19.590,13.269)
C6: (18.984,-16.920,15.062)
C5: (19.100,-18.033,14.320)
O3': (20.179,-11.963,17.575)
Image (generated by PyMOL):