Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:V45:V8
Extra
PDB:
ATOM 1 O3' U A 44 -85.027 124.566 104.423 1.00106.42 O
ATOM 2 P G A 45 -84.495 126.029 104.810 1.00 63.91 P
ATOM 3 OP1 G A 45 -85.211 126.439 106.043 1.00 63.91 O
ATOM 4 OP2 G A 45 -84.618 126.881 103.600 1.00 63.91 O
ATOM 5 O5' G A 45 -82.957 125.772 105.137 1.00 63.91 O
ATOM 6 C5' G A 45 -82.528 124.566 105.758 1.00 63.91 C
ATOM 7 C4' G A 45 -81.606 124.841 106.920 1.00 63.91 C
ATOM 8 O4' G A 45 -80.612 125.816 106.509 1.00 63.91 O
ATOM 9 C3' G A 45 -82.284 125.423 108.152 1.00 63.91 C
ATOM 10 O3' G A 45 -81.622 124.958 109.329 1.00 63.91 O
ATOM 11 C2' G A 45 -82.072 126.924 107.977 1.00 63.91 C
ATOM 12 O2' G A 45 -82.102 127.674 109.170 1.00 63.91 O
ATOM 13 C1' G A 45 -80.704 126.972 107.314 1.00 63.91 C
ATOM 14 N9 G A 45 -80.518 128.123 106.448 1.00 63.19 N
ATOM 15 C8 G A 45 -81.481 128.807 105.758 1.00 63.19 C
ATOM 16 N7 G A 45 -80.990 129.790 105.065 1.00 63.19 N
ATOM 17 C5 G A 45 -79.627 129.735 105.315 1.00 63.19 C
ATOM 18 C6 G A 45 -78.571 130.546 104.837 1.00 63.19 C
ATOM 19 O6 G A 45 -78.634 131.516 104.062 1.00 63.19 O
ATOM 20 N1 G A 45 -77.347 130.114 105.359 1.00 63.19 N
ATOM 21 C2 G A 45 -77.155 129.053 106.219 1.00 63.19 C
ATOM 22 N2 G A 45 -75.896 128.799 106.611 1.00 63.19 N
ATOM 23 N3 G A 45 -78.136 128.298 106.661 1.00 63.19 N
ATOM 24 C4 G A 45 -79.322 128.702 106.170 1.00 63.19 C
ATOM 25 P U A 46 -82.255 123.751 110.181 1.00 70.94 P
ATOM 26 OP1 U A 46 -81.321 123.453 111.275 1.00 70.94 O
ATOM 27 OP2 U A 46 -82.594 122.670 109.228 1.00 70.94 O
ATOM 28 O5' U A 46 -83.583 124.399 110.770 1.00 70.94 O
TER
ATOM 1 O3' U B 7 -75.567 126.640 110.903 1.00 28.77 O
ATOM 2 P A B 8 -74.898 125.852 109.659 1.00 42.98 P
ATOM 3 OP1 A B 8 -74.888 124.409 110.018 1.00 42.98 O
ATOM 4 OP2 A B 8 -73.607 126.516 109.355 1.00 42.98 O
ATOM 5 O5' A B 8 -75.921 126.112 108.467 1.00 42.98 O
ATOM 6 C5' A B 8 -77.091 125.311 108.321 1.00 42.98 C
ATOM 7 C4' A B 8 -77.177 124.674 106.953 1.00 42.98 C
ATOM 8 O4' A B 8 -77.012 125.704 105.928 1.00 42.98 O
ATOM 9 C3' A B 8 -76.111 123.606 106.657 1.00 42.98 C
ATOM 10 O3' A B 8 -76.677 122.543 105.891 1.00 42.98 O
ATOM 11 C2' A B 8 -75.120 124.362 105.784 1.00 42.98 C
ATOM 12 O2' A B 8 -74.339 123.550 104.933 1.00 42.98 O
ATOM 13 C1' A B 8 -76.065 125.246 104.992 1.00 42.98 C
ATOM 14 N9 A B 8 -75.412 126.374 104.329 1.00 43.56 N
ATOM 15 C8 A B 8 -74.056 126.602 104.320 1.00 43.56 C
ATOM 16 N7 A B 8 -73.675 127.630 103.606 1.00 43.56 N
ATOM 17 C5 A B 8 -74.867 128.086 103.079 1.00 43.56 C
ATOM 18 C6 A B 8 -75.124 129.157 102.222 1.00 43.56 C
ATOM 19 N6 A B 8 -74.143 129.937 101.767 1.00 43.56 N
ATOM 20 N1 A B 8 -76.412 129.378 101.856 1.00 43.56 N
ATOM 21 C2 A B 8 -77.358 128.551 102.338 1.00 43.56 C
ATOM 22 N3 A B 8 -77.239 127.496 103.157 1.00 43.56 N
ATOM 23 C4 A B 8 -75.948 127.316 103.491 1.00 43.56 C
ATOM 24 P G B 9 -77.364 121.286 106.610 1.00 40.73 P
ATOM 25 OP1 G B 9 -78.062 120.505 105.551 1.00 40.73 O
ATOM 26 OP2 G B 9 -78.151 121.826 107.749 1.00 40.73 O
ATOM 27 O5' G B 9 -76.130 120.451 107.153 1.00 40.73 O
TER
ATOM 2 P G A 45 -84.495 126.029 104.810 1.00 63.91 P
ATOM 3 OP1 G A 45 -85.211 126.439 106.043 1.00 63.91 O
ATOM 4 OP2 G A 45 -84.618 126.881 103.600 1.00 63.91 O
ATOM 5 O5' G A 45 -82.957 125.772 105.137 1.00 63.91 O
ATOM 6 C5' G A 45 -82.528 124.566 105.758 1.00 63.91 C
ATOM 7 C4' G A 45 -81.606 124.841 106.920 1.00 63.91 C
ATOM 8 O4' G A 45 -80.612 125.816 106.509 1.00 63.91 O
ATOM 9 C3' G A 45 -82.284 125.423 108.152 1.00 63.91 C
ATOM 10 O3' G A 45 -81.622 124.958 109.329 1.00 63.91 O
ATOM 11 C2' G A 45 -82.072 126.924 107.977 1.00 63.91 C
ATOM 12 O2' G A 45 -82.102 127.674 109.170 1.00 63.91 O
ATOM 13 C1' G A 45 -80.704 126.972 107.314 1.00 63.91 C
ATOM 14 N9 G A 45 -80.518 128.123 106.448 1.00 63.19 N
ATOM 15 C8 G A 45 -81.481 128.807 105.758 1.00 63.19 C
ATOM 16 N7 G A 45 -80.990 129.790 105.065 1.00 63.19 N
ATOM 17 C5 G A 45 -79.627 129.735 105.315 1.00 63.19 C
ATOM 18 C6 G A 45 -78.571 130.546 104.837 1.00 63.19 C
ATOM 19 O6 G A 45 -78.634 131.516 104.062 1.00 63.19 O
ATOM 20 N1 G A 45 -77.347 130.114 105.359 1.00 63.19 N
ATOM 21 C2 G A 45 -77.155 129.053 106.219 1.00 63.19 C
ATOM 22 N2 G A 45 -75.896 128.799 106.611 1.00 63.19 N
ATOM 23 N3 G A 45 -78.136 128.298 106.661 1.00 63.19 N
ATOM 24 C4 G A 45 -79.322 128.702 106.170 1.00 63.19 C
ATOM 25 P U A 46 -82.255 123.751 110.181 1.00 70.94 P
ATOM 26 OP1 U A 46 -81.321 123.453 111.275 1.00 70.94 O
ATOM 27 OP2 U A 46 -82.594 122.670 109.228 1.00 70.94 O
ATOM 28 O5' U A 46 -83.583 124.399 110.770 1.00 70.94 O
TER
ATOM 1 O3' U B 7 -75.567 126.640 110.903 1.00 28.77 O
ATOM 2 P A B 8 -74.898 125.852 109.659 1.00 42.98 P
ATOM 3 OP1 A B 8 -74.888 124.409 110.018 1.00 42.98 O
ATOM 4 OP2 A B 8 -73.607 126.516 109.355 1.00 42.98 O
ATOM 5 O5' A B 8 -75.921 126.112 108.467 1.00 42.98 O
ATOM 6 C5' A B 8 -77.091 125.311 108.321 1.00 42.98 C
ATOM 7 C4' A B 8 -77.177 124.674 106.953 1.00 42.98 C
ATOM 8 O4' A B 8 -77.012 125.704 105.928 1.00 42.98 O
ATOM 9 C3' A B 8 -76.111 123.606 106.657 1.00 42.98 C
ATOM 10 O3' A B 8 -76.677 122.543 105.891 1.00 42.98 O
ATOM 11 C2' A B 8 -75.120 124.362 105.784 1.00 42.98 C
ATOM 12 O2' A B 8 -74.339 123.550 104.933 1.00 42.98 O
ATOM 13 C1' A B 8 -76.065 125.246 104.992 1.00 42.98 C
ATOM 14 N9 A B 8 -75.412 126.374 104.329 1.00 43.56 N
ATOM 15 C8 A B 8 -74.056 126.602 104.320 1.00 43.56 C
ATOM 16 N7 A B 8 -73.675 127.630 103.606 1.00 43.56 N
ATOM 17 C5 A B 8 -74.867 128.086 103.079 1.00 43.56 C
ATOM 18 C6 A B 8 -75.124 129.157 102.222 1.00 43.56 C
ATOM 19 N6 A B 8 -74.143 129.937 101.767 1.00 43.56 N
ATOM 20 N1 A B 8 -76.412 129.378 101.856 1.00 43.56 N
ATOM 21 C2 A B 8 -77.358 128.551 102.338 1.00 43.56 C
ATOM 22 N3 A B 8 -77.239 127.496 103.157 1.00 43.56 N
ATOM 23 C4 A B 8 -75.948 127.316 103.491 1.00 43.56 C
ATOM 24 P G B 9 -77.364 121.286 106.610 1.00 40.73 P
ATOM 25 OP1 G B 9 -78.062 120.505 105.551 1.00 40.73 O
ATOM 26 OP2 G B 9 -78.151 121.826 107.749 1.00 40.73 O
ATOM 27 O5' G B 9 -76.130 120.451 107.153 1.00 40.73 O
TER
Atoms:
OP1: (-85.211,126.439,106.043)
OP2: (-84.618,126.881,103.600)
C3': (-82.284,125.423,108.152)
C1': (-80.704,126.972,107.314)
C5': (-82.528,124.566,105.758)
O6: (-78.634,131.516,104.062)
O4': (-80.612,125.816,106.509)
C8: (-81.481,128.807,105.758)
C2: (-77.155,129.053,106.219)
C6: (-78.571,130.546,104.837)
C5: (-79.627,129.735,105.315)
C4: (-79.322,128.702,106.170)
P: (-84.495,126.029,104.810)
C4': (-81.606,124.841,106.920)
C2': (-82.072,126.924,107.977)
O2': (-82.102,127.674,109.170)
N1: (-77.347,130.114,105.359)
N2: (-75.896,128.799,106.611)
N3: (-78.136,128.298,106.661)
N7: (-80.990,129.790,105.065)
N9: (-80.518,128.123,106.448)
O5': (-82.957,125.772,105.137)
O3': (-81.622,124.958,109.329)
OP2: (-84.618,126.881,103.600)
C3': (-82.284,125.423,108.152)
C1': (-80.704,126.972,107.314)
C5': (-82.528,124.566,105.758)
O6: (-78.634,131.516,104.062)
O4': (-80.612,125.816,106.509)
C8: (-81.481,128.807,105.758)
C2: (-77.155,129.053,106.219)
C6: (-78.571,130.546,104.837)
C5: (-79.627,129.735,105.315)
C4: (-79.322,128.702,106.170)
P: (-84.495,126.029,104.810)
C4': (-81.606,124.841,106.920)
C2': (-82.072,126.924,107.977)
O2': (-82.102,127.674,109.170)
N1: (-77.347,130.114,105.359)
N2: (-75.896,128.799,106.611)
N3: (-78.136,128.298,106.661)
N7: (-80.990,129.790,105.065)
N9: (-80.518,128.123,106.448)
O5': (-82.957,125.772,105.137)
O3': (-81.622,124.958,109.329)
OP1: (-74.888,124.409,110.018)
OP2: (-73.607,126.516,109.355)
C3': (-76.111,123.606,106.657)
C1': (-76.065,125.246,104.992)
C5': (-77.091,125.311,108.321)
O4': (-77.012,125.704,105.928)
C8: (-74.056,126.602,104.320)
O2': (-74.339,123.550,104.933)
C6: (-75.124,129.157,102.222)
C5: (-74.867,128.086,103.079)
C4: (-75.948,127.316,103.491)
P: (-74.898,125.852,109.659)
C4': (-77.177,124.674,106.953)
C2': (-75.120,124.362,105.784)
C2: (-77.358,128.551,102.338)
N1: (-76.412,129.378,101.856)
N3: (-77.239,127.496,103.157)
N6: (-74.143,129.937,101.767)
N7: (-73.675,127.630,103.606)
N9: (-75.412,126.374,104.329)
O5': (-75.921,126.112,108.467)
O3': (-76.677,122.543,105.891)
OP2: (-73.607,126.516,109.355)
C3': (-76.111,123.606,106.657)
C1': (-76.065,125.246,104.992)
C5': (-77.091,125.311,108.321)
O4': (-77.012,125.704,105.928)
C8: (-74.056,126.602,104.320)
O2': (-74.339,123.550,104.933)
C6: (-75.124,129.157,102.222)
C5: (-74.867,128.086,103.079)
C4: (-75.948,127.316,103.491)
P: (-74.898,125.852,109.659)
C4': (-77.177,124.674,106.953)
C2': (-75.120,124.362,105.784)
C2: (-77.358,128.551,102.338)
N1: (-76.412,129.378,101.856)
N3: (-77.239,127.496,103.157)
N6: (-74.143,129.937,101.767)
N7: (-73.675,127.630,103.606)
N9: (-75.412,126.374,104.329)
O5': (-75.921,126.112,108.467)
O3': (-76.677,122.543,105.891)
Image (generated by PyMOL):