Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RD2:B30:B31
Extra
PDB:
ATOM 1 O3' U A 29 9.888 -9.492 18.634 1.00 78.13 O
ATOM 2 P U A 30 10.436 -10.980 18.854 1.00 90.43 P
ATOM 3 OP1 U A 30 9.713 -11.876 17.917 1.00 72.61 O
ATOM 4 OP2 U A 30 10.411 -11.258 20.314 1.00 63.17 O
ATOM 5 O5' U A 30 11.959 -10.880 18.405 1.00 91.08 O
ATOM 6 C5' U A 30 12.304 -10.349 17.132 1.00 86.77 C
ATOM 7 C4' U A 30 13.762 -9.960 17.103 1.00 84.69 C
ATOM 8 O4' U A 30 13.992 -8.781 17.915 1.00 83.29 O
ATOM 9 C3' U A 30 14.730 -10.974 17.683 1.00 82.24 C
ATOM 10 O3' U A 30 15.001 -12.010 16.751 1.00 80.06 O
ATOM 11 C2' U A 30 15.963 -10.113 17.930 1.00 82.86 C
ATOM 12 O2' U A 30 16.722 -9.897 16.760 1.00 82.19 O
ATOM 13 C1' U A 30 15.330 -8.796 18.386 1.00 82.72 C
ATOM 14 N1 U A 30 15.326 -8.682 19.849 1.00 61.18 N
ATOM 15 C2 U A 30 16.421 -8.081 20.436 1.00 61.66 C
ATOM 16 O2 U A 30 17.347 -7.623 19.791 1.00 60.96 O
ATOM 17 N3 U A 30 16.391 -8.036 21.807 1.00 65.76 N
ATOM 18 C4 U A 30 15.397 -8.513 22.631 1.00 64.47 C
ATOM 19 O4 U A 30 15.515 -8.394 23.852 1.00 64.18 O
ATOM 20 C5 U A 30 14.289 -9.106 21.945 1.00 64.01 C
ATOM 21 C6 U A 30 14.291 -9.166 20.610 1.00 63.86 C
ATOM 22 P C A 31 14.851 -13.544 17.198 1.00 78.25 P
ATOM 23 OP1 C A 31 13.991 -14.195 16.185 1.00 67.22 O
ATOM 24 OP2 C A 31 14.465 -13.594 18.631 1.00 62.27 O
ATOM 25 O5' C A 31 16.329 -14.122 17.064 1.00 77.93 O
TER
ATOM 1 O3' U B 30 15.001 -12.010 16.751 1.00 80.06 O
ATOM 2 P C B 31 14.851 -13.544 17.198 1.00 78.25 P
ATOM 3 OP1 C B 31 13.991 -14.195 16.185 1.00 67.22 O
ATOM 4 OP2 C B 31 14.465 -13.594 18.631 1.00 62.27 O
ATOM 5 O5' C B 31 16.329 -14.122 17.064 1.00 77.93 O
ATOM 6 C5' C B 31 17.302 -13.902 18.085 1.00 76.43 C
ATOM 7 C4' C B 31 18.686 -14.196 17.555 1.00 79.96 C
ATOM 8 O4' C B 31 18.692 -15.528 17.012 1.00 80.86 O
ATOM 9 C3' C B 31 19.177 -13.311 16.408 1.00 81.41 C
ATOM 10 O3' C B 31 20.068 -12.302 16.912 1.00 77.77 O
ATOM 11 C2' C B 31 20.080 -14.239 15.572 1.00 84.76 C
ATOM 12 O2' C B 31 21.464 -14.011 15.746 1.00 92.98 O
ATOM 13 C1' C B 31 19.777 -15.626 16.136 1.00 81.98 C
ATOM 14 N1 C B 31 19.596 -16.740 15.200 1.00 72.46 N
ATOM 15 C2 C B 31 20.733 -17.457 14.823 1.00 74.20 C
ATOM 16 O2 C B 31 21.838 -17.091 15.254 1.00 75.98 O
ATOM 17 N3 C B 31 20.606 -18.521 14.003 1.00 75.03 N
ATOM 18 C4 C B 31 19.404 -18.867 13.548 1.00 77.21 C
ATOM 19 N4 C B 31 19.328 -19.927 12.742 1.00 77.73 N
ATOM 20 C5 C B 31 18.224 -18.139 13.899 1.00 75.27 C
ATOM 21 C6 C B 31 18.367 -17.090 14.720 1.00 74.31 C
ATOM 22 P U B 32 19.521 -11.029 17.731 1.00 60.80 P
ATOM 23 OP1 U B 32 18.493 -11.427 18.720 1.00 53.25 O
ATOM 24 OP2 U B 32 19.219 -9.968 16.738 1.00 55.49 O
ATOM 25 O5' U B 32 20.796 -10.570 18.568 1.00 61.67 O
TER
ATOM 2 P U A 30 10.436 -10.980 18.854 1.00 90.43 P
ATOM 3 OP1 U A 30 9.713 -11.876 17.917 1.00 72.61 O
ATOM 4 OP2 U A 30 10.411 -11.258 20.314 1.00 63.17 O
ATOM 5 O5' U A 30 11.959 -10.880 18.405 1.00 91.08 O
ATOM 6 C5' U A 30 12.304 -10.349 17.132 1.00 86.77 C
ATOM 7 C4' U A 30 13.762 -9.960 17.103 1.00 84.69 C
ATOM 8 O4' U A 30 13.992 -8.781 17.915 1.00 83.29 O
ATOM 9 C3' U A 30 14.730 -10.974 17.683 1.00 82.24 C
ATOM 10 O3' U A 30 15.001 -12.010 16.751 1.00 80.06 O
ATOM 11 C2' U A 30 15.963 -10.113 17.930 1.00 82.86 C
ATOM 12 O2' U A 30 16.722 -9.897 16.760 1.00 82.19 O
ATOM 13 C1' U A 30 15.330 -8.796 18.386 1.00 82.72 C
ATOM 14 N1 U A 30 15.326 -8.682 19.849 1.00 61.18 N
ATOM 15 C2 U A 30 16.421 -8.081 20.436 1.00 61.66 C
ATOM 16 O2 U A 30 17.347 -7.623 19.791 1.00 60.96 O
ATOM 17 N3 U A 30 16.391 -8.036 21.807 1.00 65.76 N
ATOM 18 C4 U A 30 15.397 -8.513 22.631 1.00 64.47 C
ATOM 19 O4 U A 30 15.515 -8.394 23.852 1.00 64.18 O
ATOM 20 C5 U A 30 14.289 -9.106 21.945 1.00 64.01 C
ATOM 21 C6 U A 30 14.291 -9.166 20.610 1.00 63.86 C
ATOM 22 P C A 31 14.851 -13.544 17.198 1.00 78.25 P
ATOM 23 OP1 C A 31 13.991 -14.195 16.185 1.00 67.22 O
ATOM 24 OP2 C A 31 14.465 -13.594 18.631 1.00 62.27 O
ATOM 25 O5' C A 31 16.329 -14.122 17.064 1.00 77.93 O
TER
ATOM 1 O3' U B 30 15.001 -12.010 16.751 1.00 80.06 O
ATOM 2 P C B 31 14.851 -13.544 17.198 1.00 78.25 P
ATOM 3 OP1 C B 31 13.991 -14.195 16.185 1.00 67.22 O
ATOM 4 OP2 C B 31 14.465 -13.594 18.631 1.00 62.27 O
ATOM 5 O5' C B 31 16.329 -14.122 17.064 1.00 77.93 O
ATOM 6 C5' C B 31 17.302 -13.902 18.085 1.00 76.43 C
ATOM 7 C4' C B 31 18.686 -14.196 17.555 1.00 79.96 C
ATOM 8 O4' C B 31 18.692 -15.528 17.012 1.00 80.86 O
ATOM 9 C3' C B 31 19.177 -13.311 16.408 1.00 81.41 C
ATOM 10 O3' C B 31 20.068 -12.302 16.912 1.00 77.77 O
ATOM 11 C2' C B 31 20.080 -14.239 15.572 1.00 84.76 C
ATOM 12 O2' C B 31 21.464 -14.011 15.746 1.00 92.98 O
ATOM 13 C1' C B 31 19.777 -15.626 16.136 1.00 81.98 C
ATOM 14 N1 C B 31 19.596 -16.740 15.200 1.00 72.46 N
ATOM 15 C2 C B 31 20.733 -17.457 14.823 1.00 74.20 C
ATOM 16 O2 C B 31 21.838 -17.091 15.254 1.00 75.98 O
ATOM 17 N3 C B 31 20.606 -18.521 14.003 1.00 75.03 N
ATOM 18 C4 C B 31 19.404 -18.867 13.548 1.00 77.21 C
ATOM 19 N4 C B 31 19.328 -19.927 12.742 1.00 77.73 N
ATOM 20 C5 C B 31 18.224 -18.139 13.899 1.00 75.27 C
ATOM 21 C6 C B 31 18.367 -17.090 14.720 1.00 74.31 C
ATOM 22 P U B 32 19.521 -11.029 17.731 1.00 60.80 P
ATOM 23 OP1 U B 32 18.493 -11.427 18.720 1.00 53.25 O
ATOM 24 OP2 U B 32 19.219 -9.968 16.738 1.00 55.49 O
ATOM 25 O5' U B 32 20.796 -10.570 18.568 1.00 61.67 O
TER
Atoms:
C4: (15.397,-8.513,22.631)
N3: (16.391,-8.036,21.807)
OP1: (9.713,-11.876,17.917)
OP2: (10.411,-11.258,20.314)
C2: (16.421,-8.081,20.436)
C1': (15.330,-8.796,18.386)
C3': (14.730,-10.974,17.683)
O5': (11.959,-10.880,18.405)
O4': (13.992,-8.781,17.915)
C5': (12.304,-10.349,17.132)
P: (10.436,-10.980,18.854)
C4': (13.762,-9.960,17.103)
C2': (15.963,-10.113,17.930)
O2': (16.722,-9.897,16.760)
N1: (15.326,-8.682,19.849)
O4: (15.515,-8.394,23.852)
O2: (17.347,-7.623,19.791)
C6: (14.291,-9.166,20.610)
C5: (14.289,-9.106,21.945)
O3': (15.001,-12.010,16.751)
N3: (16.391,-8.036,21.807)
OP1: (9.713,-11.876,17.917)
OP2: (10.411,-11.258,20.314)
C2: (16.421,-8.081,20.436)
C1': (15.330,-8.796,18.386)
C3': (14.730,-10.974,17.683)
O5': (11.959,-10.880,18.405)
O4': (13.992,-8.781,17.915)
C5': (12.304,-10.349,17.132)
P: (10.436,-10.980,18.854)
C4': (13.762,-9.960,17.103)
C2': (15.963,-10.113,17.930)
O2': (16.722,-9.897,16.760)
N1: (15.326,-8.682,19.849)
O4: (15.515,-8.394,23.852)
O2: (17.347,-7.623,19.791)
C6: (14.291,-9.166,20.610)
C5: (14.289,-9.106,21.945)
O3': (15.001,-12.010,16.751)
C2: (20.733,-17.457,14.823)
OP1: (13.991,-14.195,16.185)
OP2: (14.465,-13.594,18.631)
C4: (19.404,-18.867,13.548)
O5': (16.329,-14.122,17.064)
C3': (19.177,-13.311,16.408)
C1': (19.777,-15.626,16.136)
O4': (18.692,-15.528,17.012)
C5': (17.302,-13.902,18.085)
P: (14.851,-13.544,17.198)
O2: (21.838,-17.091,15.254)
C4': (18.686,-14.196,17.555)
C2': (20.080,-14.239,15.572)
O2': (21.464,-14.011,15.746)
N1: (19.596,-16.740,15.200)
N3: (20.606,-18.521,14.003)
N4: (19.328,-19.927,12.742)
C6: (18.367,-17.090,14.720)
C5: (18.224,-18.139,13.899)
O3': (20.068,-12.302,16.912)
OP1: (13.991,-14.195,16.185)
OP2: (14.465,-13.594,18.631)
C4: (19.404,-18.867,13.548)
O5': (16.329,-14.122,17.064)
C3': (19.177,-13.311,16.408)
C1': (19.777,-15.626,16.136)
O4': (18.692,-15.528,17.012)
C5': (17.302,-13.902,18.085)
P: (14.851,-13.544,17.198)
O2: (21.838,-17.091,15.254)
C4': (18.686,-14.196,17.555)
C2': (20.080,-14.239,15.572)
O2': (21.464,-14.011,15.746)
N1: (19.596,-16.740,15.200)
N3: (20.606,-18.521,14.003)
N4: (19.328,-19.927,12.742)
C6: (18.367,-17.090,14.720)
C5: (18.224,-18.139,13.899)
O3': (20.068,-12.302,16.912)
Image (generated by PyMOL):