Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX6:A55:A89
Extra
PDB:
ATOM 1 O3' G A 54 -10.988 10.416 36.028 1.00 70.19 O
ATOM 2 P G A 55 -10.183 9.745 34.826 1.00 67.63 P
ATOM 3 OP1 G A 55 -9.076 10.654 34.458 1.00 73.04 O
ATOM 4 OP2 G A 55 -11.165 9.316 33.804 1.00 64.92 O
ATOM 5 O5' G A 55 -9.545 8.456 35.521 1.00 63.50 O
ATOM 6 C5' G A 55 -8.711 8.615 36.659 1.00 61.67 C
ATOM 7 C4' G A 55 -8.203 7.266 37.130 1.00 67.25 C
ATOM 8 O4' G A 55 -9.207 6.598 37.939 1.00 65.46 O
ATOM 9 C3' G A 55 -7.905 6.273 36.017 1.00 64.07 C
ATOM 10 O3' G A 55 -6.634 6.550 35.431 1.00 69.05 O
ATOM 11 C2' G A 55 -7.932 4.969 36.806 1.00 54.58 C
ATOM 12 O2' G A 55 -6.774 4.797 37.594 1.00 50.62 O
ATOM 13 C1' G A 55 -9.145 5.203 37.701 1.00 56.18 C
ATOM 14 N9 G A 55 -10.398 4.795 37.077 1.00 51.80 N
ATOM 15 C8 G A 55 -11.324 5.614 36.477 1.00 55.96 C
ATOM 16 N7 G A 55 -12.351 4.971 35.997 1.00 54.84 N
ATOM 17 C5 G A 55 -12.090 3.641 36.295 1.00 49.73 C
ATOM 18 C6 G A 55 -12.853 2.482 36.020 1.00 46.39 C
ATOM 19 O6 G A 55 -13.943 2.406 35.440 1.00 44.50 O
ATOM 20 N1 G A 55 -12.230 1.329 36.493 1.00 42.42 N
ATOM 21 C2 G A 55 -11.021 1.306 37.149 1.00 45.79 C
ATOM 22 N2 G A 55 -10.578 0.100 37.532 1.00 46.64 N
ATOM 23 N3 G A 55 -10.294 2.385 37.414 1.00 46.88 N
ATOM 24 C4 G A 55 -10.890 3.515 36.960 1.00 50.66 C
ATOM 25 P U A 56 -6.271 5.967 33.983 1.00 82.09 P
ATOM 26 OP1 U A 56 -4.868 5.484 34.024 1.00 60.95 O
ATOM 27 OP2 U A 56 -6.690 6.961 32.966 1.00 56.60 O
ATOM 28 O5' U A 56 -7.240 4.697 33.886 1.00 71.45 O
TER
ATOM 1 O3' G B 88 -9.230 -2.567 37.501 1.00 44.86 O
ATOM 2 P A B 89 -8.086 -2.176 38.546 1.00 42.18 P
ATOM 3 OP1 A B 89 -8.269 -0.755 38.919 1.00 29.76 O
ATOM 4 OP2 A B 89 -6.797 -2.632 37.978 1.00 47.33 O
ATOM 5 O5' A B 89 -8.446 -3.070 39.822 1.00 42.35 O
ATOM 6 C5' A B 89 -9.574 -2.741 40.612 1.00 40.24 C
ATOM 7 C4' A B 89 -9.838 -3.839 41.618 1.00 40.83 C
ATOM 8 O4' A B 89 -10.177 -5.059 40.916 1.00 38.92 O
ATOM 9 C3' A B 89 -8.641 -4.241 42.462 1.00 51.08 C
ATOM 10 O3' A B 89 -8.444 -3.336 43.541 1.00 55.64 O
ATOM 11 C2' A B 89 -9.121 -5.606 42.935 1.00 49.35 C
ATOM 12 O2' A B 89 -10.171 -5.506 43.876 1.00 49.62 O
ATOM 13 C1' A B 89 -9.640 -6.163 41.617 1.00 41.25 C
ATOM 14 N9 A B 89 -8.571 -6.737 40.813 1.00 42.52 N
ATOM 15 C8 A B 89 -7.790 -6.089 39.898 1.00 42.59 C
ATOM 16 N7 A B 89 -6.895 -6.860 39.327 1.00 41.39 N
ATOM 17 C5 A B 89 -7.104 -8.097 39.912 1.00 40.28 C
ATOM 18 C6 A B 89 -6.478 -9.344 39.738 1.00 42.00 C
ATOM 19 N6 A B 89 -5.472 -9.541 38.880 1.00 37.85 N
ATOM 20 N1 A B 89 -6.930 -10.377 40.480 1.00 42.65 N
ATOM 21 C2 A B 89 -7.938 -10.169 41.334 1.00 36.92 C
ATOM 22 N3 A B 89 -8.603 -9.043 41.583 1.00 40.45 N
ATOM 23 C4 A B 89 -8.132 -8.038 40.832 1.00 40.51 C
ATOM 24 P G B 90 -6.968 -3.109 44.117 1.00 59.96 P
ATOM 25 OP1 G B 90 -7.048 -2.022 45.117 1.00 60.05 O
ATOM 26 OP2 G B 90 -6.029 -2.998 42.979 1.00 51.41 O
ATOM 27 O5' G B 90 -6.680 -4.475 44.900 1.00 53.84 O
TER
ATOM 2 P G A 55 -10.183 9.745 34.826 1.00 67.63 P
ATOM 3 OP1 G A 55 -9.076 10.654 34.458 1.00 73.04 O
ATOM 4 OP2 G A 55 -11.165 9.316 33.804 1.00 64.92 O
ATOM 5 O5' G A 55 -9.545 8.456 35.521 1.00 63.50 O
ATOM 6 C5' G A 55 -8.711 8.615 36.659 1.00 61.67 C
ATOM 7 C4' G A 55 -8.203 7.266 37.130 1.00 67.25 C
ATOM 8 O4' G A 55 -9.207 6.598 37.939 1.00 65.46 O
ATOM 9 C3' G A 55 -7.905 6.273 36.017 1.00 64.07 C
ATOM 10 O3' G A 55 -6.634 6.550 35.431 1.00 69.05 O
ATOM 11 C2' G A 55 -7.932 4.969 36.806 1.00 54.58 C
ATOM 12 O2' G A 55 -6.774 4.797 37.594 1.00 50.62 O
ATOM 13 C1' G A 55 -9.145 5.203 37.701 1.00 56.18 C
ATOM 14 N9 G A 55 -10.398 4.795 37.077 1.00 51.80 N
ATOM 15 C8 G A 55 -11.324 5.614 36.477 1.00 55.96 C
ATOM 16 N7 G A 55 -12.351 4.971 35.997 1.00 54.84 N
ATOM 17 C5 G A 55 -12.090 3.641 36.295 1.00 49.73 C
ATOM 18 C6 G A 55 -12.853 2.482 36.020 1.00 46.39 C
ATOM 19 O6 G A 55 -13.943 2.406 35.440 1.00 44.50 O
ATOM 20 N1 G A 55 -12.230 1.329 36.493 1.00 42.42 N
ATOM 21 C2 G A 55 -11.021 1.306 37.149 1.00 45.79 C
ATOM 22 N2 G A 55 -10.578 0.100 37.532 1.00 46.64 N
ATOM 23 N3 G A 55 -10.294 2.385 37.414 1.00 46.88 N
ATOM 24 C4 G A 55 -10.890 3.515 36.960 1.00 50.66 C
ATOM 25 P U A 56 -6.271 5.967 33.983 1.00 82.09 P
ATOM 26 OP1 U A 56 -4.868 5.484 34.024 1.00 60.95 O
ATOM 27 OP2 U A 56 -6.690 6.961 32.966 1.00 56.60 O
ATOM 28 O5' U A 56 -7.240 4.697 33.886 1.00 71.45 O
TER
ATOM 1 O3' G B 88 -9.230 -2.567 37.501 1.00 44.86 O
ATOM 2 P A B 89 -8.086 -2.176 38.546 1.00 42.18 P
ATOM 3 OP1 A B 89 -8.269 -0.755 38.919 1.00 29.76 O
ATOM 4 OP2 A B 89 -6.797 -2.632 37.978 1.00 47.33 O
ATOM 5 O5' A B 89 -8.446 -3.070 39.822 1.00 42.35 O
ATOM 6 C5' A B 89 -9.574 -2.741 40.612 1.00 40.24 C
ATOM 7 C4' A B 89 -9.838 -3.839 41.618 1.00 40.83 C
ATOM 8 O4' A B 89 -10.177 -5.059 40.916 1.00 38.92 O
ATOM 9 C3' A B 89 -8.641 -4.241 42.462 1.00 51.08 C
ATOM 10 O3' A B 89 -8.444 -3.336 43.541 1.00 55.64 O
ATOM 11 C2' A B 89 -9.121 -5.606 42.935 1.00 49.35 C
ATOM 12 O2' A B 89 -10.171 -5.506 43.876 1.00 49.62 O
ATOM 13 C1' A B 89 -9.640 -6.163 41.617 1.00 41.25 C
ATOM 14 N9 A B 89 -8.571 -6.737 40.813 1.00 42.52 N
ATOM 15 C8 A B 89 -7.790 -6.089 39.898 1.00 42.59 C
ATOM 16 N7 A B 89 -6.895 -6.860 39.327 1.00 41.39 N
ATOM 17 C5 A B 89 -7.104 -8.097 39.912 1.00 40.28 C
ATOM 18 C6 A B 89 -6.478 -9.344 39.738 1.00 42.00 C
ATOM 19 N6 A B 89 -5.472 -9.541 38.880 1.00 37.85 N
ATOM 20 N1 A B 89 -6.930 -10.377 40.480 1.00 42.65 N
ATOM 21 C2 A B 89 -7.938 -10.169 41.334 1.00 36.92 C
ATOM 22 N3 A B 89 -8.603 -9.043 41.583 1.00 40.45 N
ATOM 23 C4 A B 89 -8.132 -8.038 40.832 1.00 40.51 C
ATOM 24 P G B 90 -6.968 -3.109 44.117 1.00 59.96 P
ATOM 25 OP1 G B 90 -7.048 -2.022 45.117 1.00 60.05 O
ATOM 26 OP2 G B 90 -6.029 -2.998 42.979 1.00 51.41 O
ATOM 27 O5' G B 90 -6.680 -4.475 44.900 1.00 53.84 O
TER
Atoms:
OP1: (-9.076,10.654,34.458)
OP2: (-11.165,9.316,33.804)
C3': (-7.905,6.273,36.017)
C1': (-9.145,5.203,37.701)
C5': (-8.711,8.615,36.659)
O6: (-13.943,2.406,35.440)
O4': (-9.207,6.598,37.939)
C8: (-11.324,5.614,36.477)
C2: (-11.021,1.306,37.149)
C6: (-12.853,2.482,36.020)
C5: (-12.090,3.641,36.295)
C4: (-10.890,3.515,36.960)
P: (-10.183,9.745,34.826)
C4': (-8.203,7.266,37.130)
C2': (-7.932,4.969,36.806)
O2': (-6.774,4.797,37.594)
N1: (-12.230,1.329,36.493)
N2: (-10.578,0.100,37.532)
N3: (-10.294,2.385,37.414)
N7: (-12.351,4.971,35.997)
N9: (-10.398,4.795,37.077)
O5': (-9.545,8.456,35.521)
O3': (-6.634,6.550,35.431)
OP2: (-11.165,9.316,33.804)
C3': (-7.905,6.273,36.017)
C1': (-9.145,5.203,37.701)
C5': (-8.711,8.615,36.659)
O6: (-13.943,2.406,35.440)
O4': (-9.207,6.598,37.939)
C8: (-11.324,5.614,36.477)
C2: (-11.021,1.306,37.149)
C6: (-12.853,2.482,36.020)
C5: (-12.090,3.641,36.295)
C4: (-10.890,3.515,36.960)
P: (-10.183,9.745,34.826)
C4': (-8.203,7.266,37.130)
C2': (-7.932,4.969,36.806)
O2': (-6.774,4.797,37.594)
N1: (-12.230,1.329,36.493)
N2: (-10.578,0.100,37.532)
N3: (-10.294,2.385,37.414)
N7: (-12.351,4.971,35.997)
N9: (-10.398,4.795,37.077)
O5': (-9.545,8.456,35.521)
O3': (-6.634,6.550,35.431)
OP1: (-8.269,-0.755,38.919)
OP2: (-6.797,-2.632,37.978)
C3': (-8.641,-4.241,42.462)
C1': (-9.640,-6.163,41.617)
C5': (-9.574,-2.741,40.612)
O4': (-10.177,-5.059,40.916)
C8: (-7.790,-6.089,39.898)
O2': (-10.171,-5.506,43.876)
C6: (-6.478,-9.344,39.738)
C5: (-7.104,-8.097,39.912)
C4: (-8.132,-8.038,40.832)
P: (-8.086,-2.176,38.546)
C4': (-9.838,-3.839,41.618)
C2': (-9.121,-5.606,42.935)
C2: (-7.938,-10.169,41.334)
N1: (-6.930,-10.377,40.480)
N3: (-8.603,-9.043,41.583)
N6: (-5.472,-9.541,38.880)
N7: (-6.895,-6.860,39.327)
N9: (-8.571,-6.737,40.813)
O5': (-8.446,-3.070,39.822)
O3': (-8.444,-3.336,43.541)
OP2: (-6.797,-2.632,37.978)
C3': (-8.641,-4.241,42.462)
C1': (-9.640,-6.163,41.617)
C5': (-9.574,-2.741,40.612)
O4': (-10.177,-5.059,40.916)
C8: (-7.790,-6.089,39.898)
O2': (-10.171,-5.506,43.876)
C6: (-6.478,-9.344,39.738)
C5: (-7.104,-8.097,39.912)
C4: (-8.132,-8.038,40.832)
P: (-8.086,-2.176,38.546)
C4': (-9.838,-3.839,41.618)
C2': (-9.121,-5.606,42.935)
C2: (-7.938,-10.169,41.334)
N1: (-6.930,-10.377,40.480)
N3: (-8.603,-9.043,41.583)
N6: (-5.472,-9.541,38.880)
N7: (-6.895,-6.860,39.327)
N9: (-8.571,-6.737,40.813)
O5': (-8.446,-3.070,39.822)
O3': (-8.444,-3.336,43.541)
Image (generated by PyMOL):