Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A1040:A1026
Extra
PDB:
ATOM 1 O3' U A1039 27.550 -81.660 126.006 1.00126.61 O
ATOM 2 P G A1040 28.220 -83.021 126.528 1.00122.26 P
ATOM 3 OP1 G A1040 27.147 -84.050 126.599 1.00121.10 O
ATOM 4 OP2 G A1040 29.039 -82.732 127.728 1.00124.62 O
ATOM 5 O5' G A1040 29.227 -83.405 125.362 1.00125.00 O
ATOM 6 C5' G A1040 30.214 -82.486 124.901 1.00124.71 C
ATOM 7 C4' G A1040 30.729 -82.933 123.556 1.00124.74 C
ATOM 8 O4' G A1040 31.325 -84.245 123.728 1.00125.44 O
ATOM 9 C3' G A1040 29.629 -83.073 122.503 1.00127.73 C
ATOM 10 O3' G A1040 29.642 -82.091 121.473 1.00130.40 O
ATOM 11 C2' G A1040 29.672 -84.526 122.031 1.00125.28 C
ATOM 12 O2' G A1040 29.748 -84.661 120.631 1.00122.55 O
ATOM 13 C1' G A1040 30.937 -85.103 122.671 1.00120.07 C
ATOM 14 N9 G A1040 30.563 -86.400 123.229 1.00113.71 N
ATOM 15 C8 G A1040 30.175 -86.664 124.522 1.00114.96 C
ATOM 16 N7 G A1040 29.711 -87.872 124.680 1.00109.38 N
ATOM 17 C5 G A1040 29.832 -88.451 123.428 1.00108.77 C
ATOM 18 C6 G A1040 29.450 -89.729 122.977 1.00107.16 C
ATOM 19 O6 G A1040 28.858 -90.620 123.596 1.00109.95 O
ATOM 20 N1 G A1040 29.793 -89.923 121.645 1.00107.85 N
ATOM 21 C2 G A1040 30.406 -88.996 120.844 1.00108.55 C
ATOM 22 N2 G A1040 30.680 -89.389 119.593 1.00112.64 N
ATOM 23 N3 G A1040 30.730 -87.780 121.241 1.00110.17 N
ATOM 24 C4 G A1040 30.414 -87.578 122.536 1.00111.70 C
ATOM 25 P U A1041 28.365 -81.960 120.494 1.00137.04 P
ATOM 26 OP1 U A1041 28.417 -80.653 119.787 1.00134.96 O
ATOM 27 OP2 U A1041 27.164 -82.321 121.296 1.00127.09 O
ATOM 28 O5' U A1041 28.611 -83.117 119.422 1.00130.28 O
TER
ATOM 1 O3' U B1025 33.067 -89.932 117.303 1.00106.63 O
ATOM 2 P A B1026 33.428 -88.369 117.191 1.00108.73 P
ATOM 3 OP1 A B1026 32.930 -87.693 118.417 1.00105.36 O
ATOM 4 OP2 A B1026 32.965 -87.907 115.853 1.00107.86 O
ATOM 5 O5' A B1026 35.025 -88.330 117.210 1.00110.02 O
ATOM 6 C5' A B1026 35.725 -87.131 117.558 1.00 99.98 C
ATOM 7 C4' A B1026 37.040 -87.051 116.824 1.00 95.44 C
ATOM 8 O4' A B1026 37.120 -88.141 115.876 1.00 94.41 O
ATOM 9 C3' A B1026 37.201 -85.773 116.003 1.00 95.23 C
ATOM 10 O3' A B1026 37.818 -84.626 116.639 1.00 89.15 O
ATOM 11 C2' A B1026 38.097 -86.206 114.842 1.00 99.86 C
ATOM 12 O2' A B1026 39.473 -85.991 115.074 1.00102.23 O
ATOM 13 C1' A B1026 37.812 -87.710 114.726 1.00 99.98 C
ATOM 14 N9 A B1026 37.069 -88.127 113.538 1.00 99.66 N
ATOM 15 C8 A B1026 35.863 -88.781 113.479 1.00102.70 C
ATOM 16 N7 A B1026 35.447 -89.014 112.259 1.00103.65 N
ATOM 17 C5 A B1026 36.447 -88.481 111.459 1.00103.68 C
ATOM 18 C6 A B1026 36.598 -88.403 110.065 1.00104.86 C
ATOM 19 N6 A B1026 35.700 -88.879 109.200 1.00107.35 N
ATOM 20 N1 A B1026 37.715 -87.811 109.584 1.00100.48 N
ATOM 21 C2 A B1026 38.609 -87.331 110.455 1.00101.79 C
ATOM 22 N3 A B1026 38.577 -87.340 111.788 1.00104.42 N
ATOM 23 C4 A B1026 37.455 -87.937 112.232 1.00102.52 C
ATOM 24 P A B1027 38.560 -84.722 118.090 1.00 94.08 P
ATOM 25 OP1 A B1027 37.688 -84.165 119.159 1.00 93.73 O
ATOM 26 OP2 A B1027 39.916 -84.140 117.888 1.00 90.61 O
ATOM 27 O5' A B1027 38.820 -86.268 118.406 1.00 99.71 O
TER
ATOM 2 P G A1040 28.220 -83.021 126.528 1.00122.26 P
ATOM 3 OP1 G A1040 27.147 -84.050 126.599 1.00121.10 O
ATOM 4 OP2 G A1040 29.039 -82.732 127.728 1.00124.62 O
ATOM 5 O5' G A1040 29.227 -83.405 125.362 1.00125.00 O
ATOM 6 C5' G A1040 30.214 -82.486 124.901 1.00124.71 C
ATOM 7 C4' G A1040 30.729 -82.933 123.556 1.00124.74 C
ATOM 8 O4' G A1040 31.325 -84.245 123.728 1.00125.44 O
ATOM 9 C3' G A1040 29.629 -83.073 122.503 1.00127.73 C
ATOM 10 O3' G A1040 29.642 -82.091 121.473 1.00130.40 O
ATOM 11 C2' G A1040 29.672 -84.526 122.031 1.00125.28 C
ATOM 12 O2' G A1040 29.748 -84.661 120.631 1.00122.55 O
ATOM 13 C1' G A1040 30.937 -85.103 122.671 1.00120.07 C
ATOM 14 N9 G A1040 30.563 -86.400 123.229 1.00113.71 N
ATOM 15 C8 G A1040 30.175 -86.664 124.522 1.00114.96 C
ATOM 16 N7 G A1040 29.711 -87.872 124.680 1.00109.38 N
ATOM 17 C5 G A1040 29.832 -88.451 123.428 1.00108.77 C
ATOM 18 C6 G A1040 29.450 -89.729 122.977 1.00107.16 C
ATOM 19 O6 G A1040 28.858 -90.620 123.596 1.00109.95 O
ATOM 20 N1 G A1040 29.793 -89.923 121.645 1.00107.85 N
ATOM 21 C2 G A1040 30.406 -88.996 120.844 1.00108.55 C
ATOM 22 N2 G A1040 30.680 -89.389 119.593 1.00112.64 N
ATOM 23 N3 G A1040 30.730 -87.780 121.241 1.00110.17 N
ATOM 24 C4 G A1040 30.414 -87.578 122.536 1.00111.70 C
ATOM 25 P U A1041 28.365 -81.960 120.494 1.00137.04 P
ATOM 26 OP1 U A1041 28.417 -80.653 119.787 1.00134.96 O
ATOM 27 OP2 U A1041 27.164 -82.321 121.296 1.00127.09 O
ATOM 28 O5' U A1041 28.611 -83.117 119.422 1.00130.28 O
TER
ATOM 1 O3' U B1025 33.067 -89.932 117.303 1.00106.63 O
ATOM 2 P A B1026 33.428 -88.369 117.191 1.00108.73 P
ATOM 3 OP1 A B1026 32.930 -87.693 118.417 1.00105.36 O
ATOM 4 OP2 A B1026 32.965 -87.907 115.853 1.00107.86 O
ATOM 5 O5' A B1026 35.025 -88.330 117.210 1.00110.02 O
ATOM 6 C5' A B1026 35.725 -87.131 117.558 1.00 99.98 C
ATOM 7 C4' A B1026 37.040 -87.051 116.824 1.00 95.44 C
ATOM 8 O4' A B1026 37.120 -88.141 115.876 1.00 94.41 O
ATOM 9 C3' A B1026 37.201 -85.773 116.003 1.00 95.23 C
ATOM 10 O3' A B1026 37.818 -84.626 116.639 1.00 89.15 O
ATOM 11 C2' A B1026 38.097 -86.206 114.842 1.00 99.86 C
ATOM 12 O2' A B1026 39.473 -85.991 115.074 1.00102.23 O
ATOM 13 C1' A B1026 37.812 -87.710 114.726 1.00 99.98 C
ATOM 14 N9 A B1026 37.069 -88.127 113.538 1.00 99.66 N
ATOM 15 C8 A B1026 35.863 -88.781 113.479 1.00102.70 C
ATOM 16 N7 A B1026 35.447 -89.014 112.259 1.00103.65 N
ATOM 17 C5 A B1026 36.447 -88.481 111.459 1.00103.68 C
ATOM 18 C6 A B1026 36.598 -88.403 110.065 1.00104.86 C
ATOM 19 N6 A B1026 35.700 -88.879 109.200 1.00107.35 N
ATOM 20 N1 A B1026 37.715 -87.811 109.584 1.00100.48 N
ATOM 21 C2 A B1026 38.609 -87.331 110.455 1.00101.79 C
ATOM 22 N3 A B1026 38.577 -87.340 111.788 1.00104.42 N
ATOM 23 C4 A B1026 37.455 -87.937 112.232 1.00102.52 C
ATOM 24 P A B1027 38.560 -84.722 118.090 1.00 94.08 P
ATOM 25 OP1 A B1027 37.688 -84.165 119.159 1.00 93.73 O
ATOM 26 OP2 A B1027 39.916 -84.140 117.888 1.00 90.61 O
ATOM 27 O5' A B1027 38.820 -86.268 118.406 1.00 99.71 O
TER
Atoms:
OP1: (27.147,-84.050,126.599)
OP2: (29.039,-82.732,127.728)
C3': (29.629,-83.073,122.503)
C1': (30.937,-85.103,122.671)
C5': (30.214,-82.486,124.901)
O6: (28.858,-90.620,123.596)
O4': (31.325,-84.245,123.728)
C8: (30.175,-86.664,124.522)
C2: (30.406,-88.996,120.844)
C6: (29.450,-89.729,122.977)
C5: (29.832,-88.451,123.428)
C4: (30.414,-87.578,122.536)
P: (28.220,-83.021,126.528)
C4': (30.729,-82.933,123.556)
C2': (29.672,-84.526,122.031)
O2': (29.748,-84.661,120.631)
N1: (29.793,-89.923,121.645)
N2: (30.680,-89.389,119.593)
N3: (30.730,-87.780,121.241)
N7: (29.711,-87.872,124.680)
N9: (30.563,-86.400,123.229)
O5': (29.227,-83.405,125.362)
O3': (29.642,-82.091,121.473)
OP2: (29.039,-82.732,127.728)
C3': (29.629,-83.073,122.503)
C1': (30.937,-85.103,122.671)
C5': (30.214,-82.486,124.901)
O6: (28.858,-90.620,123.596)
O4': (31.325,-84.245,123.728)
C8: (30.175,-86.664,124.522)
C2: (30.406,-88.996,120.844)
C6: (29.450,-89.729,122.977)
C5: (29.832,-88.451,123.428)
C4: (30.414,-87.578,122.536)
P: (28.220,-83.021,126.528)
C4': (30.729,-82.933,123.556)
C2': (29.672,-84.526,122.031)
O2': (29.748,-84.661,120.631)
N1: (29.793,-89.923,121.645)
N2: (30.680,-89.389,119.593)
N3: (30.730,-87.780,121.241)
N7: (29.711,-87.872,124.680)
N9: (30.563,-86.400,123.229)
O5': (29.227,-83.405,125.362)
O3': (29.642,-82.091,121.473)
OP1: (32.930,-87.693,118.417)
OP2: (32.965,-87.907,115.853)
C3': (37.201,-85.773,116.003)
C1': (37.812,-87.710,114.726)
C5': (35.725,-87.131,117.558)
O4': (37.120,-88.141,115.876)
C8: (35.863,-88.781,113.479)
O2': (39.473,-85.991,115.074)
C6: (36.598,-88.403,110.065)
C5: (36.447,-88.481,111.459)
C4: (37.455,-87.937,112.232)
P: (33.428,-88.369,117.191)
C4': (37.040,-87.051,116.824)
C2': (38.097,-86.206,114.842)
C2: (38.609,-87.331,110.455)
N1: (37.715,-87.811,109.584)
N3: (38.577,-87.340,111.788)
N6: (35.700,-88.879,109.200)
N7: (35.447,-89.014,112.259)
N9: (37.069,-88.127,113.538)
O5': (35.025,-88.330,117.210)
O3': (37.818,-84.626,116.639)
OP2: (32.965,-87.907,115.853)
C3': (37.201,-85.773,116.003)
C1': (37.812,-87.710,114.726)
C5': (35.725,-87.131,117.558)
O4': (37.120,-88.141,115.876)
C8: (35.863,-88.781,113.479)
O2': (39.473,-85.991,115.074)
C6: (36.598,-88.403,110.065)
C5: (36.447,-88.481,111.459)
C4: (37.455,-87.937,112.232)
P: (33.428,-88.369,117.191)
C4': (37.040,-87.051,116.824)
C2': (38.097,-86.206,114.842)
C2: (38.609,-87.331,110.455)
N1: (37.715,-87.811,109.584)
N3: (38.577,-87.340,111.788)
N6: (35.700,-88.879,109.200)
N7: (35.447,-89.014,112.259)
N9: (37.069,-88.127,113.538)
O5': (35.025,-88.330,117.210)
O3': (37.818,-84.626,116.639)
Image (generated by PyMOL):