Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13133:13134
Extra
PDB:
ATOM 1 O3' U A3132 33.281 80.896 54.822 1.00 61.04 O
ATOM 2 P U A3133 34.843 81.153 54.918 1.00 70.09 P
ATOM 3 OP1 U A3133 35.289 81.678 53.593 1.00 70.41 O
ATOM 4 OP2 U A3133 35.439 79.914 55.445 1.00 69.33 O
ATOM 5 O5' U A3133 34.950 82.288 56.000 1.00 70.68 O
ATOM 6 C5' U A3133 34.296 83.513 55.814 1.00 71.44 C
ATOM 7 C4' U A3133 34.186 84.260 57.109 1.00 71.84 C
ATOM 8 O4' U A3133 33.751 83.347 58.162 1.00 71.32 O
ATOM 9 C3' U A3133 35.477 84.894 57.607 1.00 72.10 C
ATOM 10 O3' U A3133 35.150 86.093 58.330 1.00 72.82 O
ATOM 11 C2' U A3133 35.996 83.848 58.585 1.00 71.44 C
ATOM 12 O2' U A3133 36.914 84.357 59.540 1.00 71.66 O
ATOM 13 C1' U A3133 34.675 83.378 59.224 1.00 71.25 C
ATOM 14 N1 U A3133 34.723 82.026 59.844 1.00 70.46 N
ATOM 15 C2 U A3133 34.548 81.902 61.207 1.00 70.40 C
ATOM 16 O2 U A3133 34.347 82.812 61.964 1.00 70.93 O
ATOM 17 N3 U A3133 34.618 80.644 61.698 1.00 69.68 N
ATOM 18 C4 U A3133 34.829 79.506 60.981 1.00 69.03 C
ATOM 19 O4 U A3133 34.886 78.452 61.581 1.00 68.44 O
ATOM 20 C5 U A3133 34.974 79.684 59.581 1.00 69.13 C
ATOM 21 C6 U A3133 34.922 80.914 59.072 1.00 69.83 C
ATOM 22 P U A3134 35.211 87.547 57.615 1.00132.02 P
ATOM 23 OP1 U A3134 34.062 88.343 58.128 1.00132.58 O
ATOM 24 OP2 U A3134 35.322 87.322 56.150 1.00131.91 O
ATOM 25 O5' U A3134 36.574 88.142 58.176 1.00132.27 O
TER
ATOM 1 O3' U B3133 35.150 86.093 58.330 1.00 72.82 O
ATOM 2 P U B3134 35.211 87.547 57.615 1.00132.02 P
ATOM 3 OP1 U B3134 34.062 88.343 58.128 1.00132.58 O
ATOM 4 OP2 U B3134 35.322 87.322 56.150 1.00131.91 O
ATOM 5 O5' U B3134 36.574 88.142 58.176 1.00132.27 O
ATOM 6 C5' U B3134 37.699 87.297 58.415 1.00131.68 C
ATOM 7 C4' U B3134 38.981 88.071 58.365 1.00132.07 C
ATOM 8 O4' U B3134 38.940 88.961 57.214 1.00132.64 O
ATOM 9 C3' U B3134 39.245 88.960 59.574 1.00132.59 C
ATOM 10 O3' U B3134 40.653 89.106 59.722 1.00132.60 O
ATOM 11 C2' U B3134 38.627 90.284 59.138 1.00133.44 C
ATOM 12 O2' U B3134 39.123 91.426 59.804 1.00134.12 O
ATOM 13 C1' U B3134 38.959 90.309 57.645 1.00133.46 C
ATOM 14 N1 U B3134 38.001 91.095 56.788 1.00134.02 N
ATOM 15 C2 U B3134 36.902 91.841 57.263 1.00134.55 C
ATOM 16 O2 U B3134 36.513 91.954 58.416 1.00134.63 O
ATOM 17 N3 U B3134 36.173 92.493 56.294 1.00135.04 N
ATOM 18 C4 U B3134 36.389 92.522 54.937 1.00135.09 C
ATOM 19 O4 U B3134 35.617 93.174 54.232 1.00135.59 O
ATOM 20 C5 U B3134 37.528 91.761 54.515 1.00134.54 C
ATOM 21 C6 U B3134 38.262 91.107 55.428 1.00134.05 C
ATOM 22 P G B3135 41.301 89.818 61.013 1.00 92.11 P
ATOM 23 OP1 G B3135 41.788 91.169 60.567 1.00 92.93 O
ATOM 24 OP2 G B3135 42.292 88.853 61.588 1.00 91.48 O
ATOM 25 O5' G B3135 40.073 89.990 62.015 1.00 92.29 O
TER
ATOM 2 P U A3133 34.843 81.153 54.918 1.00 70.09 P
ATOM 3 OP1 U A3133 35.289 81.678 53.593 1.00 70.41 O
ATOM 4 OP2 U A3133 35.439 79.914 55.445 1.00 69.33 O
ATOM 5 O5' U A3133 34.950 82.288 56.000 1.00 70.68 O
ATOM 6 C5' U A3133 34.296 83.513 55.814 1.00 71.44 C
ATOM 7 C4' U A3133 34.186 84.260 57.109 1.00 71.84 C
ATOM 8 O4' U A3133 33.751 83.347 58.162 1.00 71.32 O
ATOM 9 C3' U A3133 35.477 84.894 57.607 1.00 72.10 C
ATOM 10 O3' U A3133 35.150 86.093 58.330 1.00 72.82 O
ATOM 11 C2' U A3133 35.996 83.848 58.585 1.00 71.44 C
ATOM 12 O2' U A3133 36.914 84.357 59.540 1.00 71.66 O
ATOM 13 C1' U A3133 34.675 83.378 59.224 1.00 71.25 C
ATOM 14 N1 U A3133 34.723 82.026 59.844 1.00 70.46 N
ATOM 15 C2 U A3133 34.548 81.902 61.207 1.00 70.40 C
ATOM 16 O2 U A3133 34.347 82.812 61.964 1.00 70.93 O
ATOM 17 N3 U A3133 34.618 80.644 61.698 1.00 69.68 N
ATOM 18 C4 U A3133 34.829 79.506 60.981 1.00 69.03 C
ATOM 19 O4 U A3133 34.886 78.452 61.581 1.00 68.44 O
ATOM 20 C5 U A3133 34.974 79.684 59.581 1.00 69.13 C
ATOM 21 C6 U A3133 34.922 80.914 59.072 1.00 69.83 C
ATOM 22 P U A3134 35.211 87.547 57.615 1.00132.02 P
ATOM 23 OP1 U A3134 34.062 88.343 58.128 1.00132.58 O
ATOM 24 OP2 U A3134 35.322 87.322 56.150 1.00131.91 O
ATOM 25 O5' U A3134 36.574 88.142 58.176 1.00132.27 O
TER
ATOM 1 O3' U B3133 35.150 86.093 58.330 1.00 72.82 O
ATOM 2 P U B3134 35.211 87.547 57.615 1.00132.02 P
ATOM 3 OP1 U B3134 34.062 88.343 58.128 1.00132.58 O
ATOM 4 OP2 U B3134 35.322 87.322 56.150 1.00131.91 O
ATOM 5 O5' U B3134 36.574 88.142 58.176 1.00132.27 O
ATOM 6 C5' U B3134 37.699 87.297 58.415 1.00131.68 C
ATOM 7 C4' U B3134 38.981 88.071 58.365 1.00132.07 C
ATOM 8 O4' U B3134 38.940 88.961 57.214 1.00132.64 O
ATOM 9 C3' U B3134 39.245 88.960 59.574 1.00132.59 C
ATOM 10 O3' U B3134 40.653 89.106 59.722 1.00132.60 O
ATOM 11 C2' U B3134 38.627 90.284 59.138 1.00133.44 C
ATOM 12 O2' U B3134 39.123 91.426 59.804 1.00134.12 O
ATOM 13 C1' U B3134 38.959 90.309 57.645 1.00133.46 C
ATOM 14 N1 U B3134 38.001 91.095 56.788 1.00134.02 N
ATOM 15 C2 U B3134 36.902 91.841 57.263 1.00134.55 C
ATOM 16 O2 U B3134 36.513 91.954 58.416 1.00134.63 O
ATOM 17 N3 U B3134 36.173 92.493 56.294 1.00135.04 N
ATOM 18 C4 U B3134 36.389 92.522 54.937 1.00135.09 C
ATOM 19 O4 U B3134 35.617 93.174 54.232 1.00135.59 O
ATOM 20 C5 U B3134 37.528 91.761 54.515 1.00134.54 C
ATOM 21 C6 U B3134 38.262 91.107 55.428 1.00134.05 C
ATOM 22 P G B3135 41.301 89.818 61.013 1.00 92.11 P
ATOM 23 OP1 G B3135 41.788 91.169 60.567 1.00 92.93 O
ATOM 24 OP2 G B3135 42.292 88.853 61.588 1.00 91.48 O
ATOM 25 O5' G B3135 40.073 89.990 62.015 1.00 92.29 O
TER
Atoms:
C4: (34.829,79.506,60.981)
N3: (34.618,80.644,61.698)
OP1: (35.289,81.678,53.593)
OP2: (35.439,79.914,55.445)
C2: (34.548,81.902,61.207)
C1': (34.675,83.378,59.224)
C3': (35.477,84.894,57.607)
O5': (34.950,82.288,56.000)
O4': (33.751,83.347,58.162)
C5': (34.296,83.513,55.814)
P: (34.843,81.153,54.918)
C4': (34.186,84.260,57.109)
C2': (35.996,83.848,58.585)
O2': (36.914,84.357,59.540)
N1: (34.723,82.026,59.844)
O4: (34.886,78.452,61.581)
O2: (34.347,82.812,61.964)
C6: (34.922,80.914,59.072)
C5: (34.974,79.684,59.581)
O3': (35.150,86.093,58.330)
N3: (34.618,80.644,61.698)
OP1: (35.289,81.678,53.593)
OP2: (35.439,79.914,55.445)
C2: (34.548,81.902,61.207)
C1': (34.675,83.378,59.224)
C3': (35.477,84.894,57.607)
O5': (34.950,82.288,56.000)
O4': (33.751,83.347,58.162)
C5': (34.296,83.513,55.814)
P: (34.843,81.153,54.918)
C4': (34.186,84.260,57.109)
C2': (35.996,83.848,58.585)
O2': (36.914,84.357,59.540)
N1: (34.723,82.026,59.844)
O4: (34.886,78.452,61.581)
O2: (34.347,82.812,61.964)
C6: (34.922,80.914,59.072)
C5: (34.974,79.684,59.581)
O3': (35.150,86.093,58.330)
C4: (36.389,92.522,54.937)
N3: (36.173,92.493,56.294)
OP1: (34.062,88.343,58.128)
OP2: (35.322,87.322,56.150)
C2: (36.902,91.841,57.263)
C1': (38.959,90.309,57.645)
C3': (39.245,88.960,59.574)
O5': (36.574,88.142,58.176)
O4': (38.940,88.961,57.214)
C5': (37.699,87.297,58.415)
P: (35.211,87.547,57.615)
C4': (38.981,88.071,58.365)
C2': (38.627,90.284,59.138)
O2': (39.123,91.426,59.804)
N1: (38.001,91.095,56.788)
O4: (35.617,93.174,54.232)
O2: (36.513,91.954,58.416)
C6: (38.262,91.107,55.428)
C5: (37.528,91.761,54.515)
O3': (40.653,89.106,59.722)
N3: (36.173,92.493,56.294)
OP1: (34.062,88.343,58.128)
OP2: (35.322,87.322,56.150)
C2: (36.902,91.841,57.263)
C1': (38.959,90.309,57.645)
C3': (39.245,88.960,59.574)
O5': (36.574,88.142,58.176)
O4': (38.940,88.961,57.214)
C5': (37.699,87.297,58.415)
P: (35.211,87.547,57.615)
C4': (38.981,88.071,58.365)
C2': (38.627,90.284,59.138)
O2': (39.123,91.426,59.804)
N1: (38.001,91.095,56.788)
O4: (35.617,93.174,54.232)
O2: (36.513,91.954,58.416)
C6: (38.262,91.107,55.428)
C5: (37.528,91.761,54.515)
O3': (40.653,89.106,59.722)
Image (generated by PyMOL):