Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2388:21714
Extra
PDB:
ATOM 1 O3' G A 387 -39.576 54.561 58.954 1.00 61.15 O
ATOM 2 P G A 388 -39.462 55.598 60.141 1.00 62.03 P
ATOM 3 OP1 G A 388 -40.778 55.621 60.861 1.00 62.17 O
ATOM 4 OP2 G A 388 -38.928 56.864 59.557 1.00 62.40 O
ATOM 5 O5' G A 388 -38.373 54.925 61.043 1.00 61.34 O
ATOM 6 C5' G A 388 -38.168 53.535 60.997 1.00 60.97 C
ATOM 7 C4' G A 388 -36.883 53.208 61.660 1.00 60.43 C
ATOM 8 O4' G A 388 -35.793 53.608 60.800 1.00 60.52 O
ATOM 9 C3' G A 388 -36.649 53.960 62.945 1.00 60.23 C
ATOM 10 O3' G A 388 -37.281 53.316 64.049 1.00 59.95 O
ATOM 11 C2' G A 388 -35.125 54.049 63.037 1.00 59.92 C
ATOM 12 O2' G A 388 -34.603 52.870 63.609 1.00 59.42 O
ATOM 13 C1' G A 388 -34.712 54.086 61.560 1.00 60.22 C
ATOM 14 N9 G A 388 -34.367 55.435 61.055 1.00 60.62 N
ATOM 15 C8 G A 388 -35.215 56.133 60.242 1.00 61.18 C
ATOM 16 N7 G A 388 -34.736 57.278 59.836 1.00 61.50 N
ATOM 17 C5 G A 388 -33.464 57.340 60.381 1.00 61.13 C
ATOM 18 C6 G A 388 -32.470 58.360 60.279 1.00 61.27 C
ATOM 19 O6 G A 388 -32.502 59.434 59.674 1.00 61.75 O
ATOM 20 N1 G A 388 -31.326 58.048 60.988 1.00 60.81 N
ATOM 21 C2 G A 388 -31.155 56.892 61.696 1.00 60.29 C
ATOM 22 N2 G A 388 -29.977 56.761 62.308 1.00 59.94 N
ATOM 23 N3 G A 388 -32.073 55.934 61.788 1.00 60.16 N
ATOM 24 C4 G A 388 -33.211 56.198 61.113 1.00 60.59 C
ATOM 25 P G A 389 -37.541 54.108 65.432 1.00 65.77 P
ATOM 26 OP1 G A 389 -37.565 53.077 66.512 1.00 65.32 O
ATOM 27 OP2 G A 389 -38.744 55.001 65.247 1.00 66.30 O
ATOM 28 O5' G A 389 -36.210 54.969 65.559 1.00 65.67 O
TER
ATOM 1 O3' A B1713 -29.402 57.086 66.158 1.00 63.95 O
ATOM 2 P A B1714 -29.053 55.553 66.261 1.00 58.89 P
ATOM 3 OP1 A B1714 -29.811 54.852 65.215 1.00 58.77 O
ATOM 4 OP2 A B1714 -29.250 55.177 67.668 1.00 58.54 O
ATOM 5 O5' A B1714 -27.506 55.531 65.920 1.00 58.96 O
ATOM 6 C5' A B1714 -27.061 55.432 64.585 1.00 59.14 C
ATOM 7 C4' A B1714 -25.603 55.780 64.467 1.00 59.34 C
ATOM 8 O4' A B1714 -25.267 56.823 65.407 1.00 59.65 O
ATOM 9 C3' A B1714 -24.610 54.671 64.789 1.00 58.87 C
ATOM 10 O3' A B1714 -24.434 53.773 63.732 1.00 58.68 O
ATOM 11 C2' A B1714 -23.353 55.436 65.094 1.00 59.19 C
ATOM 12 O2' A B1714 -22.713 55.813 63.879 1.00 59.58 O
ATOM 13 C1' A B1714 -23.917 56.691 65.778 1.00 59.60 C
ATOM 14 N9 A B1714 -23.837 56.608 67.242 1.00 59.36 N
ATOM 15 C8 A B1714 -24.864 56.477 68.139 1.00 59.13 C
ATOM 16 N7 A B1714 -24.463 56.452 69.390 1.00 58.98 N
ATOM 17 C5 A B1714 -23.086 56.576 69.285 1.00 59.12 C
ATOM 18 C6 A B1714 -22.102 56.608 70.256 1.00 59.09 C
ATOM 19 N6 A B1714 -22.387 56.527 71.552 1.00 58.90 N
ATOM 20 N1 A B1714 -20.824 56.733 69.821 1.00 59.28 N
ATOM 21 C2 A B1714 -20.574 56.833 68.509 1.00 59.50 C
ATOM 22 N3 A B1714 -21.418 56.812 67.496 1.00 59.56 N
ATOM 23 C4 A B1714 -22.672 56.673 67.970 1.00 59.35 C
ATOM 24 P C B1715 -24.501 52.215 64.019 1.00 68.66 P
ATOM 25 OP1 C B1715 -25.170 51.600 62.839 1.00 68.60 O
ATOM 26 OP2 C B1715 -25.135 52.048 65.353 1.00 68.37 O
ATOM 27 O5' C B1715 -22.948 51.802 64.093 1.00 68.55 O
TER
ATOM 2 P G A 388 -39.462 55.598 60.141 1.00 62.03 P
ATOM 3 OP1 G A 388 -40.778 55.621 60.861 1.00 62.17 O
ATOM 4 OP2 G A 388 -38.928 56.864 59.557 1.00 62.40 O
ATOM 5 O5' G A 388 -38.373 54.925 61.043 1.00 61.34 O
ATOM 6 C5' G A 388 -38.168 53.535 60.997 1.00 60.97 C
ATOM 7 C4' G A 388 -36.883 53.208 61.660 1.00 60.43 C
ATOM 8 O4' G A 388 -35.793 53.608 60.800 1.00 60.52 O
ATOM 9 C3' G A 388 -36.649 53.960 62.945 1.00 60.23 C
ATOM 10 O3' G A 388 -37.281 53.316 64.049 1.00 59.95 O
ATOM 11 C2' G A 388 -35.125 54.049 63.037 1.00 59.92 C
ATOM 12 O2' G A 388 -34.603 52.870 63.609 1.00 59.42 O
ATOM 13 C1' G A 388 -34.712 54.086 61.560 1.00 60.22 C
ATOM 14 N9 G A 388 -34.367 55.435 61.055 1.00 60.62 N
ATOM 15 C8 G A 388 -35.215 56.133 60.242 1.00 61.18 C
ATOM 16 N7 G A 388 -34.736 57.278 59.836 1.00 61.50 N
ATOM 17 C5 G A 388 -33.464 57.340 60.381 1.00 61.13 C
ATOM 18 C6 G A 388 -32.470 58.360 60.279 1.00 61.27 C
ATOM 19 O6 G A 388 -32.502 59.434 59.674 1.00 61.75 O
ATOM 20 N1 G A 388 -31.326 58.048 60.988 1.00 60.81 N
ATOM 21 C2 G A 388 -31.155 56.892 61.696 1.00 60.29 C
ATOM 22 N2 G A 388 -29.977 56.761 62.308 1.00 59.94 N
ATOM 23 N3 G A 388 -32.073 55.934 61.788 1.00 60.16 N
ATOM 24 C4 G A 388 -33.211 56.198 61.113 1.00 60.59 C
ATOM 25 P G A 389 -37.541 54.108 65.432 1.00 65.77 P
ATOM 26 OP1 G A 389 -37.565 53.077 66.512 1.00 65.32 O
ATOM 27 OP2 G A 389 -38.744 55.001 65.247 1.00 66.30 O
ATOM 28 O5' G A 389 -36.210 54.969 65.559 1.00 65.67 O
TER
ATOM 1 O3' A B1713 -29.402 57.086 66.158 1.00 63.95 O
ATOM 2 P A B1714 -29.053 55.553 66.261 1.00 58.89 P
ATOM 3 OP1 A B1714 -29.811 54.852 65.215 1.00 58.77 O
ATOM 4 OP2 A B1714 -29.250 55.177 67.668 1.00 58.54 O
ATOM 5 O5' A B1714 -27.506 55.531 65.920 1.00 58.96 O
ATOM 6 C5' A B1714 -27.061 55.432 64.585 1.00 59.14 C
ATOM 7 C4' A B1714 -25.603 55.780 64.467 1.00 59.34 C
ATOM 8 O4' A B1714 -25.267 56.823 65.407 1.00 59.65 O
ATOM 9 C3' A B1714 -24.610 54.671 64.789 1.00 58.87 C
ATOM 10 O3' A B1714 -24.434 53.773 63.732 1.00 58.68 O
ATOM 11 C2' A B1714 -23.353 55.436 65.094 1.00 59.19 C
ATOM 12 O2' A B1714 -22.713 55.813 63.879 1.00 59.58 O
ATOM 13 C1' A B1714 -23.917 56.691 65.778 1.00 59.60 C
ATOM 14 N9 A B1714 -23.837 56.608 67.242 1.00 59.36 N
ATOM 15 C8 A B1714 -24.864 56.477 68.139 1.00 59.13 C
ATOM 16 N7 A B1714 -24.463 56.452 69.390 1.00 58.98 N
ATOM 17 C5 A B1714 -23.086 56.576 69.285 1.00 59.12 C
ATOM 18 C6 A B1714 -22.102 56.608 70.256 1.00 59.09 C
ATOM 19 N6 A B1714 -22.387 56.527 71.552 1.00 58.90 N
ATOM 20 N1 A B1714 -20.824 56.733 69.821 1.00 59.28 N
ATOM 21 C2 A B1714 -20.574 56.833 68.509 1.00 59.50 C
ATOM 22 N3 A B1714 -21.418 56.812 67.496 1.00 59.56 N
ATOM 23 C4 A B1714 -22.672 56.673 67.970 1.00 59.35 C
ATOM 24 P C B1715 -24.501 52.215 64.019 1.00 68.66 P
ATOM 25 OP1 C B1715 -25.170 51.600 62.839 1.00 68.60 O
ATOM 26 OP2 C B1715 -25.135 52.048 65.353 1.00 68.37 O
ATOM 27 O5' C B1715 -22.948 51.802 64.093 1.00 68.55 O
TER
Atoms:
OP1: (-40.778,55.621,60.861)
OP2: (-38.928,56.864,59.557)
C3': (-36.649,53.960,62.945)
C1': (-34.712,54.086,61.560)
C5': (-38.168,53.535,60.997)
O6: (-32.502,59.434,59.674)
O4': (-35.793,53.608,60.800)
C8: (-35.215,56.133,60.242)
C2: (-31.155,56.892,61.696)
C6: (-32.470,58.360,60.279)
C5: (-33.464,57.340,60.381)
C4: (-33.211,56.198,61.113)
P: (-39.462,55.598,60.141)
C4': (-36.883,53.208,61.660)
C2': (-35.125,54.049,63.037)
O2': (-34.603,52.870,63.609)
N1: (-31.326,58.048,60.988)
N2: (-29.977,56.761,62.308)
N3: (-32.073,55.934,61.788)
N7: (-34.736,57.278,59.836)
N9: (-34.367,55.435,61.055)
O5': (-38.373,54.925,61.043)
O3': (-37.281,53.316,64.049)
OP2: (-38.928,56.864,59.557)
C3': (-36.649,53.960,62.945)
C1': (-34.712,54.086,61.560)
C5': (-38.168,53.535,60.997)
O6: (-32.502,59.434,59.674)
O4': (-35.793,53.608,60.800)
C8: (-35.215,56.133,60.242)
C2: (-31.155,56.892,61.696)
C6: (-32.470,58.360,60.279)
C5: (-33.464,57.340,60.381)
C4: (-33.211,56.198,61.113)
P: (-39.462,55.598,60.141)
C4': (-36.883,53.208,61.660)
C2': (-35.125,54.049,63.037)
O2': (-34.603,52.870,63.609)
N1: (-31.326,58.048,60.988)
N2: (-29.977,56.761,62.308)
N3: (-32.073,55.934,61.788)
N7: (-34.736,57.278,59.836)
N9: (-34.367,55.435,61.055)
O5': (-38.373,54.925,61.043)
O3': (-37.281,53.316,64.049)
OP1: (-29.811,54.852,65.215)
OP2: (-29.250,55.177,67.668)
C3': (-24.610,54.671,64.789)
C1': (-23.917,56.691,65.778)
C5': (-27.061,55.432,64.585)
O4': (-25.267,56.823,65.407)
C8: (-24.864,56.477,68.139)
O2': (-22.713,55.813,63.879)
C6: (-22.102,56.608,70.256)
C5: (-23.086,56.576,69.285)
C4: (-22.672,56.673,67.970)
P: (-29.053,55.553,66.261)
C4': (-25.603,55.780,64.467)
C2': (-23.353,55.436,65.094)
C2: (-20.574,56.833,68.509)
N1: (-20.824,56.733,69.821)
N3: (-21.418,56.812,67.496)
N6: (-22.387,56.527,71.552)
N7: (-24.463,56.452,69.390)
N9: (-23.837,56.608,67.242)
O5': (-27.506,55.531,65.920)
O3': (-24.434,53.773,63.732)
OP2: (-29.250,55.177,67.668)
C3': (-24.610,54.671,64.789)
C1': (-23.917,56.691,65.778)
C5': (-27.061,55.432,64.585)
O4': (-25.267,56.823,65.407)
C8: (-24.864,56.477,68.139)
O2': (-22.713,55.813,63.879)
C6: (-22.102,56.608,70.256)
C5: (-23.086,56.576,69.285)
C4: (-22.672,56.673,67.970)
P: (-29.053,55.553,66.261)
C4': (-25.603,55.780,64.467)
C2': (-23.353,55.436,65.094)
C2: (-20.574,56.833,68.509)
N1: (-20.824,56.733,69.821)
N3: (-21.418,56.812,67.496)
N6: (-22.387,56.527,71.552)
N7: (-24.463,56.452,69.390)
N9: (-23.837,56.608,67.242)
O5': (-27.506,55.531,65.920)
O3': (-24.434,53.773,63.732)
Image (generated by PyMOL):