Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A579:A552
Extra
PDB:
ATOM 1 O3' C A 578 -45.191 121.115 208.186 1.00 65.04 O
ATOM 2 P G A 579 -45.018 120.523 206.707 1.00 80.35 P
ATOM 3 OP1 G A 579 -46.309 120.716 205.995 1.00 62.56 O
ATOM 4 OP2 G A 579 -44.429 119.167 206.823 1.00 70.57 O
ATOM 5 O5' G A 579 -43.888 121.469 206.073 1.00 85.69 O
ATOM 6 C5' G A 579 -44.051 122.883 206.111 1.00 83.40 C
ATOM 7 C4' G A 579 -42.767 123.605 205.763 1.00 72.67 C
ATOM 8 O4' G A 579 -41.839 123.524 206.870 1.00 75.22 O
ATOM 9 C3' G A 579 -42.019 123.014 204.586 1.00 72.42 C
ATOM 10 O3' G A 579 -42.541 123.546 203.397 1.00 70.94 O
ATOM 11 C2' G A 579 -40.622 123.547 204.841 1.00 69.96 C
ATOM 12 O2' G A 579 -40.505 124.886 204.418 1.00 78.84 O
ATOM 13 C1' G A 579 -40.528 123.410 206.359 1.00 71.37 C
ATOM 14 N9 G A 579 -40.046 122.086 206.695 1.00 73.90 N
ATOM 15 C8 G A 579 -40.812 120.970 206.895 1.00 72.07 C
ATOM 16 N7 G A 579 -40.106 119.909 207.160 1.00 76.42 N
ATOM 17 C5 G A 579 -38.788 120.347 207.127 1.00 75.01 C
ATOM 18 C6 G A 579 -37.577 119.642 207.334 1.00 73.19 C
ATOM 19 O6 G A 579 -37.416 118.446 207.604 1.00 96.99 O
ATOM 20 N1 G A 579 -36.464 120.461 207.208 1.00 70.67 N
ATOM 21 C2 G A 579 -36.512 121.803 206.911 1.00 84.30 C
ATOM 22 N2 G A 579 -35.330 122.437 206.826 1.00 86.08 N
ATOM 23 N3 G A 579 -37.640 122.480 206.710 1.00 87.45 N
ATOM 24 C4 G A 579 -38.736 121.690 206.836 1.00 80.91 C
ATOM 25 P U A 580 -42.493 122.653 202.079 1.00 48.16 P
ATOM 26 OP1 U A 580 -43.845 122.647 201.489 1.00 67.73 O
ATOM 27 OP2 U A 580 -41.837 121.369 202.436 1.00 50.37 O
ATOM 28 O5' U A 580 -41.523 123.472 201.104 1.00 57.03 O
TER
ATOM 1 O3' C B 551 -33.373 125.198 203.841 1.00 50.88 O
ATOM 2 P A B 552 -34.130 125.721 205.135 1.00 56.88 P
ATOM 3 OP1 A B 552 -35.493 125.142 205.111 1.00 52.21 O
ATOM 4 OP2 A B 552 -33.906 127.186 205.221 1.00 62.82 O
ATOM 5 O5' A B 552 -33.255 125.073 206.300 1.00 49.66 O
ATOM 6 C5' A B 552 -31.868 125.415 206.351 1.00 56.07 C
ATOM 7 C4' A B 552 -31.023 124.290 206.932 1.00 53.18 C
ATOM 8 O4' A B 552 -30.889 123.193 205.990 1.00 61.66 O
ATOM 9 C3' A B 552 -29.589 124.663 207.319 1.00 54.87 C
ATOM 10 O3' A B 552 -29.449 124.445 208.707 1.00 54.59 O
ATOM 11 C2' A B 552 -28.724 123.682 206.542 1.00 56.52 C
ATOM 12 O2' A B 552 -27.639 123.213 207.304 1.00 66.17 O
ATOM 13 C1' A B 552 -29.707 122.545 206.382 1.00 60.67 C
ATOM 14 N9 A B 552 -29.277 121.613 205.366 1.00 67.40 N
ATOM 15 C8 A B 552 -28.935 120.309 205.562 1.00 71.21 C
ATOM 16 N7 A B 552 -28.574 119.692 204.469 1.00 63.13 N
ATOM 17 C5 A B 552 -28.685 120.670 203.503 1.00 59.19 C
ATOM 18 C6 A B 552 -28.438 120.644 202.131 1.00 59.93 C
ATOM 19 N6 A B 552 -28.014 119.547 201.510 1.00 61.95 N
ATOM 20 N1 A B 552 -28.640 121.780 201.437 1.00 74.73 N
ATOM 21 C2 A B 552 -29.060 122.868 202.091 1.00 74.91 C
ATOM 22 N3 A B 552 -29.326 123.015 203.387 1.00 74.19 N
ATOM 23 C4 A B 552 -29.114 121.864 204.035 1.00 65.84 C
ATOM 24 P G B 553 -28.384 125.300 209.526 1.00 49.15 P
ATOM 25 OP1 G B 553 -27.430 125.865 208.540 1.00 49.53 O
ATOM 26 OP2 G B 553 -27.934 124.489 210.684 1.00 47.44 O
ATOM 27 O5' G B 553 -29.292 126.492 210.070 1.00 56.38 O
TER
ATOM 2 P G A 579 -45.018 120.523 206.707 1.00 80.35 P
ATOM 3 OP1 G A 579 -46.309 120.716 205.995 1.00 62.56 O
ATOM 4 OP2 G A 579 -44.429 119.167 206.823 1.00 70.57 O
ATOM 5 O5' G A 579 -43.888 121.469 206.073 1.00 85.69 O
ATOM 6 C5' G A 579 -44.051 122.883 206.111 1.00 83.40 C
ATOM 7 C4' G A 579 -42.767 123.605 205.763 1.00 72.67 C
ATOM 8 O4' G A 579 -41.839 123.524 206.870 1.00 75.22 O
ATOM 9 C3' G A 579 -42.019 123.014 204.586 1.00 72.42 C
ATOM 10 O3' G A 579 -42.541 123.546 203.397 1.00 70.94 O
ATOM 11 C2' G A 579 -40.622 123.547 204.841 1.00 69.96 C
ATOM 12 O2' G A 579 -40.505 124.886 204.418 1.00 78.84 O
ATOM 13 C1' G A 579 -40.528 123.410 206.359 1.00 71.37 C
ATOM 14 N9 G A 579 -40.046 122.086 206.695 1.00 73.90 N
ATOM 15 C8 G A 579 -40.812 120.970 206.895 1.00 72.07 C
ATOM 16 N7 G A 579 -40.106 119.909 207.160 1.00 76.42 N
ATOM 17 C5 G A 579 -38.788 120.347 207.127 1.00 75.01 C
ATOM 18 C6 G A 579 -37.577 119.642 207.334 1.00 73.19 C
ATOM 19 O6 G A 579 -37.416 118.446 207.604 1.00 96.99 O
ATOM 20 N1 G A 579 -36.464 120.461 207.208 1.00 70.67 N
ATOM 21 C2 G A 579 -36.512 121.803 206.911 1.00 84.30 C
ATOM 22 N2 G A 579 -35.330 122.437 206.826 1.00 86.08 N
ATOM 23 N3 G A 579 -37.640 122.480 206.710 1.00 87.45 N
ATOM 24 C4 G A 579 -38.736 121.690 206.836 1.00 80.91 C
ATOM 25 P U A 580 -42.493 122.653 202.079 1.00 48.16 P
ATOM 26 OP1 U A 580 -43.845 122.647 201.489 1.00 67.73 O
ATOM 27 OP2 U A 580 -41.837 121.369 202.436 1.00 50.37 O
ATOM 28 O5' U A 580 -41.523 123.472 201.104 1.00 57.03 O
TER
ATOM 1 O3' C B 551 -33.373 125.198 203.841 1.00 50.88 O
ATOM 2 P A B 552 -34.130 125.721 205.135 1.00 56.88 P
ATOM 3 OP1 A B 552 -35.493 125.142 205.111 1.00 52.21 O
ATOM 4 OP2 A B 552 -33.906 127.186 205.221 1.00 62.82 O
ATOM 5 O5' A B 552 -33.255 125.073 206.300 1.00 49.66 O
ATOM 6 C5' A B 552 -31.868 125.415 206.351 1.00 56.07 C
ATOM 7 C4' A B 552 -31.023 124.290 206.932 1.00 53.18 C
ATOM 8 O4' A B 552 -30.889 123.193 205.990 1.00 61.66 O
ATOM 9 C3' A B 552 -29.589 124.663 207.319 1.00 54.87 C
ATOM 10 O3' A B 552 -29.449 124.445 208.707 1.00 54.59 O
ATOM 11 C2' A B 552 -28.724 123.682 206.542 1.00 56.52 C
ATOM 12 O2' A B 552 -27.639 123.213 207.304 1.00 66.17 O
ATOM 13 C1' A B 552 -29.707 122.545 206.382 1.00 60.67 C
ATOM 14 N9 A B 552 -29.277 121.613 205.366 1.00 67.40 N
ATOM 15 C8 A B 552 -28.935 120.309 205.562 1.00 71.21 C
ATOM 16 N7 A B 552 -28.574 119.692 204.469 1.00 63.13 N
ATOM 17 C5 A B 552 -28.685 120.670 203.503 1.00 59.19 C
ATOM 18 C6 A B 552 -28.438 120.644 202.131 1.00 59.93 C
ATOM 19 N6 A B 552 -28.014 119.547 201.510 1.00 61.95 N
ATOM 20 N1 A B 552 -28.640 121.780 201.437 1.00 74.73 N
ATOM 21 C2 A B 552 -29.060 122.868 202.091 1.00 74.91 C
ATOM 22 N3 A B 552 -29.326 123.015 203.387 1.00 74.19 N
ATOM 23 C4 A B 552 -29.114 121.864 204.035 1.00 65.84 C
ATOM 24 P G B 553 -28.384 125.300 209.526 1.00 49.15 P
ATOM 25 OP1 G B 553 -27.430 125.865 208.540 1.00 49.53 O
ATOM 26 OP2 G B 553 -27.934 124.489 210.684 1.00 47.44 O
ATOM 27 O5' G B 553 -29.292 126.492 210.070 1.00 56.38 O
TER
Atoms:
OP1: (-46.309,120.716,205.995)
OP2: (-44.429,119.167,206.823)
C3': (-42.019,123.014,204.586)
C1': (-40.528,123.410,206.359)
C5': (-44.051,122.883,206.111)
O6: (-37.416,118.446,207.604)
O4': (-41.839,123.524,206.870)
C8: (-40.812,120.970,206.895)
C2: (-36.512,121.803,206.911)
C6: (-37.577,119.642,207.334)
C5: (-38.788,120.347,207.127)
C4: (-38.736,121.690,206.836)
P: (-45.018,120.523,206.707)
C4': (-42.767,123.605,205.763)
C2': (-40.622,123.547,204.841)
O2': (-40.505,124.886,204.418)
N1: (-36.464,120.461,207.208)
N2: (-35.330,122.437,206.826)
N3: (-37.640,122.480,206.710)
N7: (-40.106,119.909,207.160)
N9: (-40.046,122.086,206.695)
O5': (-43.888,121.469,206.073)
O3': (-42.541,123.546,203.397)
OP2: (-44.429,119.167,206.823)
C3': (-42.019,123.014,204.586)
C1': (-40.528,123.410,206.359)
C5': (-44.051,122.883,206.111)
O6: (-37.416,118.446,207.604)
O4': (-41.839,123.524,206.870)
C8: (-40.812,120.970,206.895)
C2: (-36.512,121.803,206.911)
C6: (-37.577,119.642,207.334)
C5: (-38.788,120.347,207.127)
C4: (-38.736,121.690,206.836)
P: (-45.018,120.523,206.707)
C4': (-42.767,123.605,205.763)
C2': (-40.622,123.547,204.841)
O2': (-40.505,124.886,204.418)
N1: (-36.464,120.461,207.208)
N2: (-35.330,122.437,206.826)
N3: (-37.640,122.480,206.710)
N7: (-40.106,119.909,207.160)
N9: (-40.046,122.086,206.695)
O5': (-43.888,121.469,206.073)
O3': (-42.541,123.546,203.397)
OP1: (-35.493,125.142,205.111)
OP2: (-33.906,127.186,205.221)
C3': (-29.589,124.663,207.319)
C1': (-29.707,122.545,206.382)
C5': (-31.868,125.415,206.351)
O4': (-30.889,123.193,205.990)
C8: (-28.935,120.309,205.562)
O2': (-27.639,123.213,207.304)
C6: (-28.438,120.644,202.131)
C5: (-28.685,120.670,203.503)
C4: (-29.114,121.864,204.035)
P: (-34.130,125.721,205.135)
C4': (-31.023,124.290,206.932)
C2': (-28.724,123.682,206.542)
C2: (-29.060,122.868,202.091)
N1: (-28.640,121.780,201.437)
N3: (-29.326,123.015,203.387)
N6: (-28.014,119.547,201.510)
N7: (-28.574,119.692,204.469)
N9: (-29.277,121.613,205.366)
O5': (-33.255,125.073,206.300)
O3': (-29.449,124.445,208.707)
OP2: (-33.906,127.186,205.221)
C3': (-29.589,124.663,207.319)
C1': (-29.707,122.545,206.382)
C5': (-31.868,125.415,206.351)
O4': (-30.889,123.193,205.990)
C8: (-28.935,120.309,205.562)
O2': (-27.639,123.213,207.304)
C6: (-28.438,120.644,202.131)
C5: (-28.685,120.670,203.503)
C4: (-29.114,121.864,204.035)
P: (-34.130,125.721,205.135)
C4': (-31.023,124.290,206.932)
C2': (-28.724,123.682,206.542)
C2: (-29.060,122.868,202.091)
N1: (-28.640,121.780,201.437)
N3: (-29.326,123.015,203.387)
N6: (-28.014,119.547,201.510)
N7: (-28.574,119.692,204.469)
N9: (-29.277,121.613,205.366)
O5': (-33.255,125.073,206.300)
O3': (-29.449,124.445,208.707)
Image (generated by PyMOL):