ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02323:02326

Extra

PDB:
ATOM 1 O3' G A2322 57.376 109.640 89.154 1.00 39.12 O
ATOM 2 P G A2323 56.014 110.358 89.622 1.00 39.91 P
ATOM 3 OP1 G A2323 54.941 109.353 89.461 1.00 40.79 O
ATOM 4 OP2 G A2323 55.877 111.688 88.974 1.00 37.52 O
ATOM 5 O5' G A2323 56.196 110.562 91.188 1.00 39.19 O
ATOM 6 C5' G A2323 57.321 111.269 91.717 1.00 38.48 C
ATOM 7 C4' G A2323 57.942 110.468 92.826 1.00 38.74 C
ATOM 8 O4' G A2323 59.099 111.182 93.343 1.00 39.57 O
ATOM 9 C3' G A2323 57.030 110.214 94.029 1.00 38.38 C
ATOM 10 O3' G A2323 57.406 108.968 94.635 1.00 38.75 O
ATOM 11 C2' G A2323 57.443 111.345 94.969 1.00 38.13 C
ATOM 12 O2' G A2323 57.197 111.088 96.331 1.00 39.30 O
ATOM 13 C1' G A2323 58.944 111.341 94.733 1.00 39.44 C
ATOM 14 N9 G A2323 59.715 112.487 95.194 1.00 40.58 N
ATOM 15 C8 G A2323 59.483 113.824 94.979 1.00 40.94 C
ATOM 16 N7 G A2323 60.383 114.592 95.533 1.00 40.95 N
ATOM 17 C5 G A2323 61.257 113.707 96.149 1.00 40.93 C
ATOM 18 C6 G A2323 62.431 113.946 96.905 1.00 39.78 C
ATOM 19 O6 G A2323 62.958 115.023 97.185 1.00 40.23 O
ATOM 20 N1 G A2323 63.004 112.759 97.346 1.00 38.58 N
ATOM 21 C2 G A2323 62.517 111.503 97.088 1.00 39.57 C
ATOM 22 N2 G A2323 63.210 110.478 97.583 1.00 40.68 N
ATOM 23 N3 G A2323 61.429 111.268 96.391 1.00 41.04 N
ATOM 24 C4 G A2323 60.854 112.408 95.952 1.00 41.60 C
ATOM 25 P A A2324 56.687 107.597 94.203 1.00 37.09 P
ATOM 26 OP1 A A2324 55.225 107.833 94.173 1.00 38.15 O
ATOM 27 OP2 A A2324 57.240 106.524 95.061 1.00 37.45 O
ATOM 28 O5' A A2324 57.176 107.327 92.713 1.00 37.23 O
TER

ATOM 1 O3' U B2325 64.302 106.783 96.261 1.00 35.38 O
ATOM 2 P A B2326 63.998 106.801 97.837 1.00 34.01 P
ATOM 3 OP1 A B2326 63.773 105.397 98.252 1.00 32.33 O
ATOM 4 OP2 A B2326 62.963 107.817 98.114 1.00 32.65 O
ATOM 5 O5' A B2326 65.373 107.298 98.466 1.00 33.70 O
ATOM 6 C5' A B2326 66.508 106.414 98.549 1.00 34.00 C
ATOM 7 C4' A B2326 67.806 107.187 98.442 1.00 35.36 C
ATOM 8 O4' A B2326 68.007 107.654 97.085 1.00 35.62 O
ATOM 9 C3' A B2326 67.950 108.448 99.275 1.00 36.61 C
ATOM 10 O3' A B2326 68.275 108.184 100.627 1.00 38.95 O
ATOM 11 C2' A B2326 69.090 109.155 98.561 1.00 36.80 C
ATOM 12 O2' A B2326 70.353 108.587 98.839 1.00 38.88 O
ATOM 13 C1' A B2326 68.738 108.870 97.105 1.00 36.13 C
ATOM 14 N9 A B2326 67.895 109.931 96.562 1.00 35.59 N
ATOM 15 C8 A B2326 66.577 109.873 96.198 1.00 36.21 C
ATOM 16 N7 A B2326 66.104 111.006 95.751 1.00 36.72 N
ATOM 17 C5 A B2326 67.184 111.872 95.826 1.00 36.02 C
ATOM 18 C6 A B2326 67.340 113.223 95.482 1.00 35.40 C
ATOM 19 N6 A B2326 66.367 113.971 94.974 1.00 35.44 N
ATOM 20 N1 A B2326 68.549 113.787 95.675 1.00 37.12 N
ATOM 21 C2 A B2326 69.532 113.033 96.172 1.00 37.73 C
ATOM 22 N3 A B2326 69.512 111.750 96.525 1.00 38.24 N
ATOM 23 C4 A B2326 68.293 111.222 96.324 1.00 36.38 C
ATOM 24 P A B2327 67.993 109.308 101.738 1.00 40.42 P
ATOM 25 OP1 A B2327 68.517 108.775 103.023 1.00 38.82 O
ATOM 26 OP2 A B2327 66.572 109.720 101.644 1.00 39.10 O
ATOM 27 O5' A B2327 68.871 110.548 101.250 1.00 41.06 O
TER

Atoms:
OP1: (54.941,109.353,89.461)
OP2: (55.877,111.688,88.974)
C3': (57.030,110.214,94.029)
C1': (58.944,111.341,94.733)
C5': (57.321,111.269,91.717)
O6: (62.958,115.023,97.185)
O4': (59.099,111.182,93.343)
C8: (59.483,113.824,94.979)
C2: (62.517,111.503,97.088)
C6: (62.431,113.946,96.905)
C5: (61.257,113.707,96.149)
C4: (60.854,112.408,95.952)
P: (56.014,110.358,89.622)
C4': (57.942,110.468,92.826)
C2': (57.443,111.345,94.969)
O2': (57.197,111.088,96.331)
N1: (63.004,112.759,97.346)
N2: (63.210,110.478,97.583)
N3: (61.429,111.268,96.391)
N7: (60.383,114.592,95.533)
N9: (59.715,112.487,95.194)
O5': (56.196,110.562,91.188)
O3': (57.406,108.968,94.635)
OP1: (63.773,105.397,98.252)
OP2: (62.963,107.817,98.114)
C3': (67.950,108.448,99.275)
C1': (68.738,108.870,97.105)
C5': (66.508,106.414,98.549)
O4': (68.007,107.654,97.085)
C8: (66.577,109.873,96.198)
O2': (70.353,108.587,98.839)
C6: (67.340,113.223,95.482)
C5: (67.184,111.872,95.826)
C4: (68.293,111.222,96.324)
P: (63.998,106.801,97.837)
C4': (67.806,107.187,98.442)
C2': (69.090,109.155,98.561)
C2: (69.532,113.033,96.172)
N1: (68.549,113.787,95.675)
N3: (69.512,111.750,96.525)
N6: (66.367,113.971,94.974)
N7: (66.104,111.006,95.751)
N9: (67.895,109.931,96.562)
O5': (65.373,107.298,98.466)
O3': (68.275,108.184,100.627)
Image (generated by PyMOL):
PyMOL image
show in jmol