Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01097:01076
Extra
PDB:
ATOM 1 O3' G A1096 43.900 95.265 151.829 1.00 61.88 O
ATOM 2 P G A1097 44.132 96.057 150.454 1.00 57.89 P
ATOM 3 OP1 G A1097 44.463 95.035 149.430 1.00 59.54 O
ATOM 4 OP2 G A1097 45.087 97.164 150.722 1.00 57.04 O
ATOM 5 O5' G A1097 42.698 96.667 150.114 1.00 54.11 O
ATOM 6 C5' G A1097 42.339 98.007 150.504 1.00 48.36 C
ATOM 7 C4' G A1097 41.173 98.496 149.675 1.00 47.55 C
ATOM 8 O4' G A1097 41.569 98.561 148.278 1.00 46.97 O
ATOM 9 C3' G A1097 39.948 97.593 149.675 1.00 46.52 C
ATOM 10 O3' G A1097 39.125 97.838 150.812 1.00 45.20 O
ATOM 11 C2' G A1097 39.271 97.968 148.362 1.00 46.39 C
ATOM 12 O2' G A1097 38.548 99.175 148.429 1.00 46.16 O
ATOM 13 C1' G A1097 40.482 98.174 147.449 1.00 45.35 C
ATOM 14 N9 G A1097 40.857 96.953 146.738 1.00 43.39 N
ATOM 15 C8 G A1097 41.909 96.116 147.014 1.00 41.84 C
ATOM 16 N7 G A1097 41.968 95.088 146.213 1.00 43.60 N
ATOM 17 C5 G A1097 40.894 95.259 145.354 1.00 42.44 C
ATOM 18 C6 G A1097 40.443 94.457 144.280 1.00 44.04 C
ATOM 19 O6 G A1097 40.909 93.391 143.865 1.00 45.00 O
ATOM 20 N1 G A1097 39.320 95.005 143.671 1.00 45.32 N
ATOM 21 C2 G A1097 38.704 96.169 144.054 1.00 44.73 C
ATOM 22 N2 G A1097 37.627 96.538 143.345 1.00 44.25 N
ATOM 23 N3 G A1097 39.112 96.917 145.060 1.00 44.39 N
ATOM 24 C4 G A1097 40.203 96.408 145.660 1.00 42.50 C
ATOM 25 P U A1098 38.517 96.605 151.655 1.00 42.87 P
ATOM 26 OP1 U A1098 37.895 97.203 152.860 1.00 42.30 O
ATOM 27 OP2 U A1098 39.552 95.547 151.811 1.00 43.33 O
ATOM 28 O5' U A1098 37.359 96.032 150.729 1.00 41.22 O
TER
ATOM 1 O3' U B1075 35.277 98.886 142.267 1.00 39.62 O
ATOM 2 P A B1076 35.320 99.639 143.688 1.00 39.82 P
ATOM 3 OP1 A B1076 36.665 99.345 144.245 1.00 38.99 O
ATOM 4 OP2 A B1076 34.109 99.294 144.468 1.00 39.34 O
ATOM 5 O5' A B1076 35.230 101.191 143.336 1.00 37.53 O
ATOM 6 C5' A B1076 36.375 101.897 142.826 1.00 37.94 C
ATOM 7 C4' A B1076 36.113 103.386 142.798 1.00 37.11 C
ATOM 8 O4' A B1076 34.945 103.637 141.971 1.00 38.30 O
ATOM 9 C3' A B1076 35.833 104.046 144.142 1.00 36.93 C
ATOM 10 O3' A B1076 36.333 105.373 144.126 1.00 38.57 O
ATOM 11 C2' A B1076 34.313 104.077 144.187 1.00 37.78 C
ATOM 12 O2' A B1076 33.797 105.120 144.983 1.00 38.76 O
ATOM 13 C1' A B1076 33.967 104.323 142.722 1.00 37.44 C
ATOM 14 N9 A B1076 32.655 103.777 142.381 1.00 37.09 N
ATOM 15 C8 A B1076 32.281 102.457 142.295 1.00 37.70 C
ATOM 16 N7 A B1076 31.011 102.285 142.022 1.00 37.23 N
ATOM 17 C5 A B1076 30.518 103.576 141.909 1.00 35.24 C
ATOM 18 C6 A B1076 29.237 104.074 141.645 1.00 34.83 C
ATOM 19 N6 A B1076 28.169 103.298 141.432 1.00 37.40 N
ATOM 20 N1 A B1076 29.080 105.411 141.608 1.00 33.54 N
ATOM 21 C2 A B1076 30.146 106.186 141.821 1.00 34.42 C
ATOM 22 N3 A B1076 31.402 105.839 142.079 1.00 34.75 N
ATOM 23 C4 A B1076 31.522 104.503 142.113 1.00 35.43 C
ATOM 24 P A B1077 37.840 105.660 144.605 1.00 42.91 P
ATOM 25 OP1 A B1077 38.228 104.619 145.596 1.00 42.45 O
ATOM 26 OP2 A B1077 37.935 107.095 144.967 1.00 43.01 O
ATOM 27 O5' A B1077 38.717 105.401 143.299 1.00 43.16 O
TER
ATOM 2 P G A1097 44.132 96.057 150.454 1.00 57.89 P
ATOM 3 OP1 G A1097 44.463 95.035 149.430 1.00 59.54 O
ATOM 4 OP2 G A1097 45.087 97.164 150.722 1.00 57.04 O
ATOM 5 O5' G A1097 42.698 96.667 150.114 1.00 54.11 O
ATOM 6 C5' G A1097 42.339 98.007 150.504 1.00 48.36 C
ATOM 7 C4' G A1097 41.173 98.496 149.675 1.00 47.55 C
ATOM 8 O4' G A1097 41.569 98.561 148.278 1.00 46.97 O
ATOM 9 C3' G A1097 39.948 97.593 149.675 1.00 46.52 C
ATOM 10 O3' G A1097 39.125 97.838 150.812 1.00 45.20 O
ATOM 11 C2' G A1097 39.271 97.968 148.362 1.00 46.39 C
ATOM 12 O2' G A1097 38.548 99.175 148.429 1.00 46.16 O
ATOM 13 C1' G A1097 40.482 98.174 147.449 1.00 45.35 C
ATOM 14 N9 G A1097 40.857 96.953 146.738 1.00 43.39 N
ATOM 15 C8 G A1097 41.909 96.116 147.014 1.00 41.84 C
ATOM 16 N7 G A1097 41.968 95.088 146.213 1.00 43.60 N
ATOM 17 C5 G A1097 40.894 95.259 145.354 1.00 42.44 C
ATOM 18 C6 G A1097 40.443 94.457 144.280 1.00 44.04 C
ATOM 19 O6 G A1097 40.909 93.391 143.865 1.00 45.00 O
ATOM 20 N1 G A1097 39.320 95.005 143.671 1.00 45.32 N
ATOM 21 C2 G A1097 38.704 96.169 144.054 1.00 44.73 C
ATOM 22 N2 G A1097 37.627 96.538 143.345 1.00 44.25 N
ATOM 23 N3 G A1097 39.112 96.917 145.060 1.00 44.39 N
ATOM 24 C4 G A1097 40.203 96.408 145.660 1.00 42.50 C
ATOM 25 P U A1098 38.517 96.605 151.655 1.00 42.87 P
ATOM 26 OP1 U A1098 37.895 97.203 152.860 1.00 42.30 O
ATOM 27 OP2 U A1098 39.552 95.547 151.811 1.00 43.33 O
ATOM 28 O5' U A1098 37.359 96.032 150.729 1.00 41.22 O
TER
ATOM 1 O3' U B1075 35.277 98.886 142.267 1.00 39.62 O
ATOM 2 P A B1076 35.320 99.639 143.688 1.00 39.82 P
ATOM 3 OP1 A B1076 36.665 99.345 144.245 1.00 38.99 O
ATOM 4 OP2 A B1076 34.109 99.294 144.468 1.00 39.34 O
ATOM 5 O5' A B1076 35.230 101.191 143.336 1.00 37.53 O
ATOM 6 C5' A B1076 36.375 101.897 142.826 1.00 37.94 C
ATOM 7 C4' A B1076 36.113 103.386 142.798 1.00 37.11 C
ATOM 8 O4' A B1076 34.945 103.637 141.971 1.00 38.30 O
ATOM 9 C3' A B1076 35.833 104.046 144.142 1.00 36.93 C
ATOM 10 O3' A B1076 36.333 105.373 144.126 1.00 38.57 O
ATOM 11 C2' A B1076 34.313 104.077 144.187 1.00 37.78 C
ATOM 12 O2' A B1076 33.797 105.120 144.983 1.00 38.76 O
ATOM 13 C1' A B1076 33.967 104.323 142.722 1.00 37.44 C
ATOM 14 N9 A B1076 32.655 103.777 142.381 1.00 37.09 N
ATOM 15 C8 A B1076 32.281 102.457 142.295 1.00 37.70 C
ATOM 16 N7 A B1076 31.011 102.285 142.022 1.00 37.23 N
ATOM 17 C5 A B1076 30.518 103.576 141.909 1.00 35.24 C
ATOM 18 C6 A B1076 29.237 104.074 141.645 1.00 34.83 C
ATOM 19 N6 A B1076 28.169 103.298 141.432 1.00 37.40 N
ATOM 20 N1 A B1076 29.080 105.411 141.608 1.00 33.54 N
ATOM 21 C2 A B1076 30.146 106.186 141.821 1.00 34.42 C
ATOM 22 N3 A B1076 31.402 105.839 142.079 1.00 34.75 N
ATOM 23 C4 A B1076 31.522 104.503 142.113 1.00 35.43 C
ATOM 24 P A B1077 37.840 105.660 144.605 1.00 42.91 P
ATOM 25 OP1 A B1077 38.228 104.619 145.596 1.00 42.45 O
ATOM 26 OP2 A B1077 37.935 107.095 144.967 1.00 43.01 O
ATOM 27 O5' A B1077 38.717 105.401 143.299 1.00 43.16 O
TER
Atoms:
OP1: (44.463,95.035,149.430)
OP2: (45.087,97.164,150.722)
C3': (39.948,97.593,149.675)
C1': (40.482,98.174,147.449)
C5': (42.339,98.007,150.504)
O6: (40.909,93.391,143.865)
O4': (41.569,98.561,148.278)
C8: (41.909,96.116,147.014)
C2: (38.704,96.169,144.054)
C6: (40.443,94.457,144.280)
C5: (40.894,95.259,145.354)
C4: (40.203,96.408,145.660)
P: (44.132,96.057,150.454)
C4': (41.173,98.496,149.675)
C2': (39.271,97.968,148.362)
O2': (38.548,99.175,148.429)
N1: (39.320,95.005,143.671)
N2: (37.627,96.538,143.345)
N3: (39.112,96.917,145.060)
N7: (41.968,95.088,146.213)
N9: (40.857,96.953,146.738)
O5': (42.698,96.667,150.114)
O3': (39.125,97.838,150.812)
OP2: (45.087,97.164,150.722)
C3': (39.948,97.593,149.675)
C1': (40.482,98.174,147.449)
C5': (42.339,98.007,150.504)
O6: (40.909,93.391,143.865)
O4': (41.569,98.561,148.278)
C8: (41.909,96.116,147.014)
C2: (38.704,96.169,144.054)
C6: (40.443,94.457,144.280)
C5: (40.894,95.259,145.354)
C4: (40.203,96.408,145.660)
P: (44.132,96.057,150.454)
C4': (41.173,98.496,149.675)
C2': (39.271,97.968,148.362)
O2': (38.548,99.175,148.429)
N1: (39.320,95.005,143.671)
N2: (37.627,96.538,143.345)
N3: (39.112,96.917,145.060)
N7: (41.968,95.088,146.213)
N9: (40.857,96.953,146.738)
O5': (42.698,96.667,150.114)
O3': (39.125,97.838,150.812)
OP1: (36.665,99.345,144.245)
OP2: (34.109,99.294,144.468)
C3': (35.833,104.046,144.142)
C1': (33.967,104.323,142.722)
C5': (36.375,101.897,142.826)
O4': (34.945,103.637,141.971)
C8: (32.281,102.457,142.295)
O2': (33.797,105.120,144.983)
C6: (29.237,104.074,141.645)
C5: (30.518,103.576,141.909)
C4: (31.522,104.503,142.113)
P: (35.320,99.639,143.688)
C4': (36.113,103.386,142.798)
C2': (34.313,104.077,144.187)
C2: (30.146,106.186,141.821)
N1: (29.080,105.411,141.608)
N3: (31.402,105.839,142.079)
N6: (28.169,103.298,141.432)
N7: (31.011,102.285,142.022)
N9: (32.655,103.777,142.381)
O5': (35.230,101.191,143.336)
O3': (36.333,105.373,144.126)
OP2: (34.109,99.294,144.468)
C3': (35.833,104.046,144.142)
C1': (33.967,104.323,142.722)
C5': (36.375,101.897,142.826)
O4': (34.945,103.637,141.971)
C8: (32.281,102.457,142.295)
O2': (33.797,105.120,144.983)
C6: (29.237,104.074,141.645)
C5: (30.518,103.576,141.909)
C4: (31.522,104.503,142.113)
P: (35.320,99.639,143.688)
C4': (36.113,103.386,142.798)
C2': (34.313,104.077,144.187)
C2: (30.146,106.186,141.821)
N1: (29.080,105.411,141.608)
N3: (31.402,105.839,142.079)
N6: (28.169,103.298,141.432)
N7: (31.011,102.285,142.022)
N9: (32.655,103.777,142.381)
O5': (35.230,101.191,143.336)
O3': (36.333,105.373,144.126)
Image (generated by PyMOL):