Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12130:11951
Extra
PDB:
ATOM 1 O3' C A2129 -3.317 24.149 91.789 1.00 43.85 O
ATOM 2 P G A2130 -2.627 24.582 90.406 1.00 48.42 P
ATOM 3 OP1 G A2130 -1.726 25.673 90.712 1.00 48.54 O
ATOM 4 OP2 G A2130 -3.710 24.829 89.424 1.00 48.57 O
ATOM 5 O5' G A2130 -1.794 23.289 89.989 1.00 47.90 O
ATOM 6 C5' G A2130 -0.697 22.844 90.761 1.00 47.69 C
ATOM 7 C4' G A2130 0.146 21.861 90.004 1.00 47.22 C
ATOM 8 O4' G A2130 -0.676 20.745 89.602 1.00 47.08 O
ATOM 9 C3' G A2130 0.782 22.403 88.718 1.00 47.05 C
ATOM 10 O3' G A2130 2.066 21.789 88.500 1.00 46.65 O
ATOM 11 C2' G A2130 -0.157 21.886 87.656 1.00 46.98 C
ATOM 12 O2' G A2130 0.439 21.748 86.402 1.00 46.69 O
ATOM 13 C1' G A2130 -0.542 20.535 88.226 1.00 46.84 C
ATOM 14 N9 G A2130 -1.809 20.003 87.703 1.00 46.91 N
ATOM 15 C8 G A2130 -3.024 20.666 87.638 1.00 47.28 C
ATOM 16 N7 G A2130 -3.976 19.964 87.095 1.00 47.27 N
ATOM 17 C5 G A2130 -3.382 18.758 86.766 1.00 46.87 C
ATOM 18 C6 G A2130 -3.913 17.586 86.165 1.00 46.69 C
ATOM 19 O6 G A2130 -5.032 17.288 85.749 1.00 46.83 O
ATOM 20 N1 G A2130 -2.960 16.615 86.045 1.00 46.30 N
ATOM 21 C2 G A2130 -1.665 16.708 86.411 1.00 46.10 C
ATOM 22 N2 G A2130 -0.975 15.604 86.124 1.00 45.74 N
ATOM 23 N3 G A2130 -1.141 17.767 86.966 1.00 46.26 N
ATOM 24 C4 G A2130 -2.041 18.756 87.126 1.00 46.64 C
ATOM 25 P A A2131 3.388 22.191 89.360 1.00 48.31 P
ATOM 26 OP1 A A2131 4.034 20.913 89.765 1.00 47.98 O
ATOM 27 OP2 A A2131 2.982 23.182 90.428 1.00 48.74 O
ATOM 28 O5' A A2131 4.282 22.927 88.270 1.00 48.17 O
TER
ATOM 1 O3' A B1950 3.704 14.594 86.609 1.00 37.59 O
ATOM 2 P A B1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 3 OP1 A B1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 4 OP2 A B1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 5 O5' A B1951 2.228 12.683 87.101 1.00 40.74 O
ATOM 6 C5' A B1951 0.922 12.225 87.325 1.00 40.93 C
ATOM 7 C4' A B1951 0.670 10.955 86.605 1.00 40.70 C
ATOM 8 O4' A B1951 0.628 11.216 85.188 1.00 40.60 O
ATOM 9 C3' A B1951 1.730 9.881 86.807 1.00 40.38 C
ATOM 10 O3' A B1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 11 C2' A B1951 2.403 9.785 85.469 1.00 40.11 C
ATOM 12 O2' A B1951 2.836 8.491 85.200 1.00 39.83 O
ATOM 13 C1' A B1951 1.264 10.162 84.558 1.00 40.27 C
ATOM 14 N9 A B1951 1.629 10.524 83.196 1.00 40.13 N
ATOM 15 C8 A B1951 2.855 10.544 82.669 1.00 39.87 C
ATOM 16 N7 A B1951 2.860 10.782 81.393 1.00 39.80 N
ATOM 17 C5 A B1951 1.542 10.886 81.038 1.00 40.02 C
ATOM 18 C6 A B1951 0.922 11.157 79.816 1.00 40.09 C
ATOM 19 N6 A B1951 1.591 11.371 78.695 1.00 39.92 N
ATOM 20 N1 A B1951 -0.408 11.217 79.753 1.00 40.35 N
ATOM 21 C2 A B1951 -1.050 11.008 80.896 1.00 40.52 C
ATOM 22 N3 A B1951 -0.573 10.757 82.119 1.00 40.48 N
ATOM 23 C4 A B1951 0.765 10.697 82.133 1.00 40.22 C
ATOM 24 P A B1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 25 OP1 A B1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 26 OP2 A B1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 27 O5' A B1952 2.913 7.520 88.253 1.00 39.69 O
TER
ATOM 2 P G A2130 -2.627 24.582 90.406 1.00 48.42 P
ATOM 3 OP1 G A2130 -1.726 25.673 90.712 1.00 48.54 O
ATOM 4 OP2 G A2130 -3.710 24.829 89.424 1.00 48.57 O
ATOM 5 O5' G A2130 -1.794 23.289 89.989 1.00 47.90 O
ATOM 6 C5' G A2130 -0.697 22.844 90.761 1.00 47.69 C
ATOM 7 C4' G A2130 0.146 21.861 90.004 1.00 47.22 C
ATOM 8 O4' G A2130 -0.676 20.745 89.602 1.00 47.08 O
ATOM 9 C3' G A2130 0.782 22.403 88.718 1.00 47.05 C
ATOM 10 O3' G A2130 2.066 21.789 88.500 1.00 46.65 O
ATOM 11 C2' G A2130 -0.157 21.886 87.656 1.00 46.98 C
ATOM 12 O2' G A2130 0.439 21.748 86.402 1.00 46.69 O
ATOM 13 C1' G A2130 -0.542 20.535 88.226 1.00 46.84 C
ATOM 14 N9 G A2130 -1.809 20.003 87.703 1.00 46.91 N
ATOM 15 C8 G A2130 -3.024 20.666 87.638 1.00 47.28 C
ATOM 16 N7 G A2130 -3.976 19.964 87.095 1.00 47.27 N
ATOM 17 C5 G A2130 -3.382 18.758 86.766 1.00 46.87 C
ATOM 18 C6 G A2130 -3.913 17.586 86.165 1.00 46.69 C
ATOM 19 O6 G A2130 -5.032 17.288 85.749 1.00 46.83 O
ATOM 20 N1 G A2130 -2.960 16.615 86.045 1.00 46.30 N
ATOM 21 C2 G A2130 -1.665 16.708 86.411 1.00 46.10 C
ATOM 22 N2 G A2130 -0.975 15.604 86.124 1.00 45.74 N
ATOM 23 N3 G A2130 -1.141 17.767 86.966 1.00 46.26 N
ATOM 24 C4 G A2130 -2.041 18.756 87.126 1.00 46.64 C
ATOM 25 P A A2131 3.388 22.191 89.360 1.00 48.31 P
ATOM 26 OP1 A A2131 4.034 20.913 89.765 1.00 47.98 O
ATOM 27 OP2 A A2131 2.982 23.182 90.428 1.00 48.74 O
ATOM 28 O5' A A2131 4.282 22.927 88.270 1.00 48.17 O
TER
ATOM 1 O3' A B1950 3.704 14.594 86.609 1.00 37.59 O
ATOM 2 P A B1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 3 OP1 A B1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 4 OP2 A B1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 5 O5' A B1951 2.228 12.683 87.101 1.00 40.74 O
ATOM 6 C5' A B1951 0.922 12.225 87.325 1.00 40.93 C
ATOM 7 C4' A B1951 0.670 10.955 86.605 1.00 40.70 C
ATOM 8 O4' A B1951 0.628 11.216 85.188 1.00 40.60 O
ATOM 9 C3' A B1951 1.730 9.881 86.807 1.00 40.38 C
ATOM 10 O3' A B1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 11 C2' A B1951 2.403 9.785 85.469 1.00 40.11 C
ATOM 12 O2' A B1951 2.836 8.491 85.200 1.00 39.83 O
ATOM 13 C1' A B1951 1.264 10.162 84.558 1.00 40.27 C
ATOM 14 N9 A B1951 1.629 10.524 83.196 1.00 40.13 N
ATOM 15 C8 A B1951 2.855 10.544 82.669 1.00 39.87 C
ATOM 16 N7 A B1951 2.860 10.782 81.393 1.00 39.80 N
ATOM 17 C5 A B1951 1.542 10.886 81.038 1.00 40.02 C
ATOM 18 C6 A B1951 0.922 11.157 79.816 1.00 40.09 C
ATOM 19 N6 A B1951 1.591 11.371 78.695 1.00 39.92 N
ATOM 20 N1 A B1951 -0.408 11.217 79.753 1.00 40.35 N
ATOM 21 C2 A B1951 -1.050 11.008 80.896 1.00 40.52 C
ATOM 22 N3 A B1951 -0.573 10.757 82.119 1.00 40.48 N
ATOM 23 C4 A B1951 0.765 10.697 82.133 1.00 40.22 C
ATOM 24 P A B1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 25 OP1 A B1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 26 OP2 A B1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 27 O5' A B1952 2.913 7.520 88.253 1.00 39.69 O
TER
Atoms:
OP1: (-1.726,25.673,90.712)
OP2: (-3.710,24.829,89.424)
C3': (0.782,22.403,88.718)
C1': (-0.542,20.535,88.226)
C5': (-0.697,22.844,90.761)
O6: (-5.032,17.288,85.749)
O4': (-0.676,20.745,89.602)
C8: (-3.024,20.666,87.638)
C2: (-1.665,16.708,86.411)
C6: (-3.913,17.586,86.165)
C5: (-3.382,18.758,86.766)
C4: (-2.041,18.756,87.126)
P: (-2.627,24.582,90.406)
C4': (0.146,21.861,90.004)
C2': (-0.157,21.886,87.656)
O2': (0.439,21.748,86.402)
N1: (-2.960,16.615,86.045)
N2: (-0.975,15.604,86.124)
N3: (-1.141,17.767,86.966)
N7: (-3.976,19.964,87.095)
N9: (-1.809,20.003,87.703)
O5': (-1.794,23.289,89.989)
O3': (2.066,21.789,88.500)
OP2: (-3.710,24.829,89.424)
C3': (0.782,22.403,88.718)
C1': (-0.542,20.535,88.226)
C5': (-0.697,22.844,90.761)
O6: (-5.032,17.288,85.749)
O4': (-0.676,20.745,89.602)
C8: (-3.024,20.666,87.638)
C2: (-1.665,16.708,86.411)
C6: (-3.913,17.586,86.165)
C5: (-3.382,18.758,86.766)
C4: (-2.041,18.756,87.126)
P: (-2.627,24.582,90.406)
C4': (0.146,21.861,90.004)
C2': (-0.157,21.886,87.656)
O2': (0.439,21.748,86.402)
N1: (-2.960,16.615,86.045)
N2: (-0.975,15.604,86.124)
N3: (-1.141,17.767,86.966)
N7: (-3.976,19.964,87.095)
N9: (-1.809,20.003,87.703)
O5': (-1.794,23.289,89.989)
O3': (2.066,21.789,88.500)
OP1: (1.581,15.021,87.761)
OP2: (3.487,13.814,88.944)
C3': (1.730,9.881,86.807)
C1': (1.264,10.162,84.558)
C5': (0.922,12.225,87.325)
O4': (0.628,11.216,85.188)
C8: (2.855,10.544,82.669)
O2': (2.836,8.491,85.200)
C6: (0.922,11.157,79.816)
C5: (1.542,10.886,81.038)
C4: (0.765,10.697,82.133)
P: (2.701,14.060,87.713)
C4': (0.670,10.955,86.605)
C2': (2.403,9.785,85.469)
C2: (-1.050,11.008,80.896)
N1: (-0.408,11.217,79.753)
N3: (-0.573,10.757,82.119)
N6: (1.591,11.371,78.695)
N7: (2.860,10.782,81.393)
N9: (1.629,10.524,83.196)
O5': (2.228,12.683,87.101)
O3': (1.104,8.660,87.022)
OP2: (3.487,13.814,88.944)
C3': (1.730,9.881,86.807)
C1': (1.264,10.162,84.558)
C5': (0.922,12.225,87.325)
O4': (0.628,11.216,85.188)
C8: (2.855,10.544,82.669)
O2': (2.836,8.491,85.200)
C6: (0.922,11.157,79.816)
C5: (1.542,10.886,81.038)
C4: (0.765,10.697,82.133)
P: (2.701,14.060,87.713)
C4': (0.670,10.955,86.605)
C2': (2.403,9.785,85.469)
C2: (-1.050,11.008,80.896)
N1: (-0.408,11.217,79.753)
N3: (-0.573,10.757,82.119)
N6: (1.591,11.371,78.695)
N7: (2.860,10.782,81.393)
N9: (1.629,10.524,83.196)
O5': (2.228,12.683,87.101)
O3': (1.104,8.660,87.022)
Image (generated by PyMOL):