Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2479:A1927
Extra
PDB:
ATOM 1 O3' A A2478 85.716 111.668 104.815 1.00 82.09 O
ATOM 2 P G A2479 87.172 112.266 105.167 1.00 76.78 P
ATOM 3 OP1 G A2479 88.172 111.443 104.421 1.00 76.07 O
ATOM 4 OP2 G A2479 87.281 112.382 106.644 1.00 76.93 O
ATOM 5 O5' G A2479 87.146 113.737 104.550 1.00 72.14 O
ATOM 6 C5' G A2479 88.017 114.087 103.464 1.00 64.17 C
ATOM 7 C4' G A2479 89.316 114.645 103.997 1.00 58.26 C
ATOM 8 O4' G A2479 90.392 114.243 103.120 1.00 56.21 O
ATOM 9 C3' G A2479 89.463 116.159 104.116 1.00 55.07 C
ATOM 10 O3' G A2479 88.923 116.714 105.321 1.00 53.11 O
ATOM 11 C2' G A2479 90.969 116.306 104.119 1.00 54.35 C
ATOM 12 O2' G A2479 91.495 115.929 105.370 1.00 54.58 O
ATOM 13 C1' G A2479 91.369 115.262 103.081 1.00 54.87 C
ATOM 14 N9 G A2479 91.372 115.824 101.740 1.00 54.49 N
ATOM 15 C8 G A2479 90.411 115.658 100.772 1.00 55.05 C
ATOM 16 N7 G A2479 90.672 116.310 99.676 1.00 54.80 N
ATOM 17 C5 G A2479 91.884 116.938 99.937 1.00 54.35 C
ATOM 18 C6 G A2479 92.662 117.780 99.131 1.00 54.14 C
ATOM 19 O6 G A2479 92.445 118.148 97.980 1.00 55.68 O
ATOM 20 N1 G A2479 93.810 118.204 99.790 1.00 52.90 N
ATOM 21 C2 G A2479 94.164 117.855 101.065 1.00 52.66 C
ATOM 22 N2 G A2479 95.306 118.381 101.533 1.00 53.15 N
ATOM 23 N3 G A2479 93.452 117.056 101.827 1.00 53.43 N
ATOM 24 C4 G A2479 92.328 116.640 101.205 1.00 54.25 C
ATOM 25 P G A2480 88.334 118.226 105.332 1.00 51.97 P
ATOM 26 OP1 G A2480 87.662 118.474 106.639 1.00 50.26 O
ATOM 27 OP2 G A2480 87.567 118.414 104.076 1.00 53.00 O
ATOM 28 O5' G A2480 89.620 119.164 105.269 1.00 47.43 O
TER
ATOM 1 O3' U B1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 2 P A B1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 3 OP1 A B1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 4 OP2 A B1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 5 O5' A B1927 97.488 117.087 106.192 1.00 57.40 O
ATOM 6 C5' A B1927 98.616 116.587 106.878 1.00 57.78 C
ATOM 7 C4' A B1927 98.200 115.933 108.156 1.00 58.65 C
ATOM 8 O4' A B1927 99.393 115.384 108.752 1.00 59.50 O
ATOM 9 C3' A B1927 97.605 116.899 109.168 1.00 58.49 C
ATOM 10 O3' A B1927 96.722 116.172 110.010 1.00 58.39 O
ATOM 11 C2' A B1927 98.801 117.261 110.027 1.00 59.14 C
ATOM 12 O2' A B1927 98.396 117.552 111.342 1.00 59.88 O
ATOM 13 C1' A B1927 99.592 115.960 110.006 1.00 60.20 C
ATOM 14 N9 A B1927 101.016 116.181 110.174 1.00 61.98 N
ATOM 15 C8 A B1927 101.888 116.861 109.360 1.00 62.19 C
ATOM 16 N7 A B1927 103.109 116.919 109.833 1.00 62.57 N
ATOM 17 C5 A B1927 103.035 116.217 111.026 1.00 62.60 C
ATOM 18 C6 A B1927 103.987 115.913 111.992 1.00 62.33 C
ATOM 19 N6 A B1927 105.258 116.289 111.904 1.00 62.65 N
ATOM 20 N1 A B1927 103.588 115.194 113.068 1.00 62.85 N
ATOM 21 C2 A B1927 102.306 114.808 113.143 1.00 63.43 C
ATOM 22 N3 A B1927 101.315 115.031 112.289 1.00 63.87 N
ATOM 23 C4 A B1927 101.754 115.750 111.242 1.00 63.10 C
ATOM 24 P C B1928 95.141 116.408 109.937 1.00 58.99 P
ATOM 25 OP1 C B1928 94.878 117.350 108.828 1.00 58.57 O
ATOM 26 OP2 C B1928 94.694 116.738 111.311 1.00 59.02 O
ATOM 27 O5' C B1928 94.612 114.946 109.579 1.00 58.71 O
TER
ATOM 2 P G A2479 87.172 112.266 105.167 1.00 76.78 P
ATOM 3 OP1 G A2479 88.172 111.443 104.421 1.00 76.07 O
ATOM 4 OP2 G A2479 87.281 112.382 106.644 1.00 76.93 O
ATOM 5 O5' G A2479 87.146 113.737 104.550 1.00 72.14 O
ATOM 6 C5' G A2479 88.017 114.087 103.464 1.00 64.17 C
ATOM 7 C4' G A2479 89.316 114.645 103.997 1.00 58.26 C
ATOM 8 O4' G A2479 90.392 114.243 103.120 1.00 56.21 O
ATOM 9 C3' G A2479 89.463 116.159 104.116 1.00 55.07 C
ATOM 10 O3' G A2479 88.923 116.714 105.321 1.00 53.11 O
ATOM 11 C2' G A2479 90.969 116.306 104.119 1.00 54.35 C
ATOM 12 O2' G A2479 91.495 115.929 105.370 1.00 54.58 O
ATOM 13 C1' G A2479 91.369 115.262 103.081 1.00 54.87 C
ATOM 14 N9 G A2479 91.372 115.824 101.740 1.00 54.49 N
ATOM 15 C8 G A2479 90.411 115.658 100.772 1.00 55.05 C
ATOM 16 N7 G A2479 90.672 116.310 99.676 1.00 54.80 N
ATOM 17 C5 G A2479 91.884 116.938 99.937 1.00 54.35 C
ATOM 18 C6 G A2479 92.662 117.780 99.131 1.00 54.14 C
ATOM 19 O6 G A2479 92.445 118.148 97.980 1.00 55.68 O
ATOM 20 N1 G A2479 93.810 118.204 99.790 1.00 52.90 N
ATOM 21 C2 G A2479 94.164 117.855 101.065 1.00 52.66 C
ATOM 22 N2 G A2479 95.306 118.381 101.533 1.00 53.15 N
ATOM 23 N3 G A2479 93.452 117.056 101.827 1.00 53.43 N
ATOM 24 C4 G A2479 92.328 116.640 101.205 1.00 54.25 C
ATOM 25 P G A2480 88.334 118.226 105.332 1.00 51.97 P
ATOM 26 OP1 G A2480 87.662 118.474 106.639 1.00 50.26 O
ATOM 27 OP2 G A2480 87.567 118.414 104.076 1.00 53.00 O
ATOM 28 O5' G A2480 89.620 119.164 105.269 1.00 47.43 O
TER
ATOM 1 O3' U B1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 2 P A B1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 3 OP1 A B1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 4 OP2 A B1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 5 O5' A B1927 97.488 117.087 106.192 1.00 57.40 O
ATOM 6 C5' A B1927 98.616 116.587 106.878 1.00 57.78 C
ATOM 7 C4' A B1927 98.200 115.933 108.156 1.00 58.65 C
ATOM 8 O4' A B1927 99.393 115.384 108.752 1.00 59.50 O
ATOM 9 C3' A B1927 97.605 116.899 109.168 1.00 58.49 C
ATOM 10 O3' A B1927 96.722 116.172 110.010 1.00 58.39 O
ATOM 11 C2' A B1927 98.801 117.261 110.027 1.00 59.14 C
ATOM 12 O2' A B1927 98.396 117.552 111.342 1.00 59.88 O
ATOM 13 C1' A B1927 99.592 115.960 110.006 1.00 60.20 C
ATOM 14 N9 A B1927 101.016 116.181 110.174 1.00 61.98 N
ATOM 15 C8 A B1927 101.888 116.861 109.360 1.00 62.19 C
ATOM 16 N7 A B1927 103.109 116.919 109.833 1.00 62.57 N
ATOM 17 C5 A B1927 103.035 116.217 111.026 1.00 62.60 C
ATOM 18 C6 A B1927 103.987 115.913 111.992 1.00 62.33 C
ATOM 19 N6 A B1927 105.258 116.289 111.904 1.00 62.65 N
ATOM 20 N1 A B1927 103.588 115.194 113.068 1.00 62.85 N
ATOM 21 C2 A B1927 102.306 114.808 113.143 1.00 63.43 C
ATOM 22 N3 A B1927 101.315 115.031 112.289 1.00 63.87 N
ATOM 23 C4 A B1927 101.754 115.750 111.242 1.00 63.10 C
ATOM 24 P C B1928 95.141 116.408 109.937 1.00 58.99 P
ATOM 25 OP1 C B1928 94.878 117.350 108.828 1.00 58.57 O
ATOM 26 OP2 C B1928 94.694 116.738 111.311 1.00 59.02 O
ATOM 27 O5' C B1928 94.612 114.946 109.579 1.00 58.71 O
TER
Atoms:
OP1: (88.172,111.443,104.421)
OP2: (87.281,112.382,106.644)
C3': (89.463,116.159,104.116)
C1': (91.369,115.262,103.081)
C5': (88.017,114.087,103.464)
O6: (92.445,118.148,97.980)
O4': (90.392,114.243,103.120)
C8: (90.411,115.658,100.772)
C2: (94.164,117.855,101.065)
C6: (92.662,117.780,99.131)
C5: (91.884,116.938,99.937)
C4: (92.328,116.640,101.205)
P: (87.172,112.266,105.167)
C4': (89.316,114.645,103.997)
C2': (90.969,116.306,104.119)
O2': (91.495,115.929,105.370)
N1: (93.810,118.204,99.790)
N2: (95.306,118.381,101.533)
N3: (93.452,117.056,101.827)
N7: (90.672,116.310,99.676)
N9: (91.372,115.824,101.740)
O5': (87.146,113.737,104.550)
O3': (88.923,116.714,105.321)
OP2: (87.281,112.382,106.644)
C3': (89.463,116.159,104.116)
C1': (91.369,115.262,103.081)
C5': (88.017,114.087,103.464)
O6: (92.445,118.148,97.980)
O4': (90.392,114.243,103.120)
C8: (90.411,115.658,100.772)
C2: (94.164,117.855,101.065)
C6: (92.662,117.780,99.131)
C5: (91.884,116.938,99.937)
C4: (92.328,116.640,101.205)
P: (87.172,112.266,105.167)
C4': (89.316,114.645,103.997)
C2': (90.969,116.306,104.119)
O2': (91.495,115.929,105.370)
N1: (93.810,118.204,99.790)
N2: (95.306,118.381,101.533)
N3: (93.452,117.056,101.827)
N7: (90.672,116.310,99.676)
N9: (91.372,115.824,101.740)
O5': (87.146,113.737,104.550)
O3': (88.923,116.714,105.321)
OP1: (97.646,115.388,104.412)
OP2: (96.026,117.380,104.228)
C3': (97.605,116.899,109.168)
C1': (99.592,115.960,110.006)
C5': (98.616,116.587,106.878)
O4': (99.393,115.384,108.752)
C8: (101.888,116.861,109.360)
O2': (98.396,117.552,111.342)
C6: (103.987,115.913,111.992)
C5: (103.035,116.217,111.026)
C4: (101.754,115.750,111.242)
P: (97.341,116.827,104.638)
C4': (98.200,115.933,108.156)
C2': (98.801,117.261,110.027)
C2: (102.306,114.808,113.143)
N1: (103.588,115.194,113.068)
N3: (101.315,115.031,112.289)
N6: (105.258,116.289,111.904)
N7: (103.109,116.919,109.833)
N9: (101.016,116.181,110.174)
O5': (97.488,117.087,106.192)
O3': (96.722,116.172,110.010)
OP2: (96.026,117.380,104.228)
C3': (97.605,116.899,109.168)
C1': (99.592,115.960,110.006)
C5': (98.616,116.587,106.878)
O4': (99.393,115.384,108.752)
C8: (101.888,116.861,109.360)
O2': (98.396,117.552,111.342)
C6: (103.987,115.913,111.992)
C5: (103.035,116.217,111.026)
C4: (101.754,115.750,111.242)
P: (97.341,116.827,104.638)
C4': (98.200,115.933,108.156)
C2': (98.801,117.261,110.027)
C2: (102.306,114.808,113.143)
N1: (103.588,115.194,113.068)
N3: (101.315,115.031,112.289)
N6: (105.258,116.289,111.904)
N7: (103.109,116.919,109.833)
N9: (101.016,116.181,110.174)
O5': (97.488,117.087,106.192)
O3': (96.722,116.172,110.010)
Image (generated by PyMOL):