Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02479:01927
Extra
PDB:
ATOM 1 O3' A A2478 85.456 111.761 104.041 1.00 82.77 O
ATOM 2 P G A2479 86.967 112.113 104.462 1.00 77.85 P
ATOM 3 OP1 G A2479 87.886 111.198 103.715 1.00 76.66 O
ATOM 4 OP2 G A2479 87.005 112.142 105.948 1.00 77.26 O
ATOM 5 O5' G A2479 87.176 113.606 103.937 1.00 71.83 O
ATOM 6 C5' G A2479 88.123 113.894 102.895 1.00 61.47 C
ATOM 7 C4' G A2479 89.399 114.454 103.483 1.00 54.46 C
ATOM 8 O4' G A2479 90.503 114.078 102.627 1.00 52.30 O
ATOM 9 C3' G A2479 89.510 115.967 103.609 1.00 50.78 C
ATOM 10 O3' G A2479 88.922 116.496 104.790 1.00 46.55 O
ATOM 11 C2' G A2479 91.015 116.166 103.611 1.00 50.09 C
ATOM 12 O2' G A2479 91.586 115.847 104.860 1.00 51.34 O
ATOM 13 C1' G A2479 91.445 115.131 102.573 1.00 49.94 C
ATOM 14 N9 G A2479 91.424 115.687 101.224 1.00 48.46 N
ATOM 15 C8 G A2479 90.431 115.560 100.284 1.00 48.44 C
ATOM 16 N7 G A2479 90.679 116.217 99.187 1.00 48.67 N
ATOM 17 C5 G A2479 91.915 116.804 99.415 1.00 48.08 C
ATOM 18 C6 G A2479 92.691 117.644 98.594 1.00 48.70 C
ATOM 19 O6 G A2479 92.431 118.072 97.462 1.00 50.54 O
ATOM 20 N1 G A2479 93.884 117.994 99.211 1.00 48.05 N
ATOM 21 C2 G A2479 94.275 117.593 100.456 1.00 47.45 C
ATOM 22 N2 G A2479 95.469 118.015 100.870 1.00 48.98 N
ATOM 23 N3 G A2479 93.552 116.828 101.238 1.00 48.37 N
ATOM 24 C4 G A2479 92.393 116.471 100.659 1.00 48.04 C
ATOM 25 P G A2480 88.392 118.014 104.805 1.00 45.18 P
ATOM 26 OP1 G A2480 87.788 118.269 106.137 1.00 45.40 O
ATOM 27 OP2 G A2480 87.591 118.243 103.580 1.00 48.39 O
ATOM 28 O5' G A2480 89.701 118.909 104.683 1.00 44.69 O
TER
ATOM 1 O3' U B1926 98.654 117.235 103.412 1.00 47.85 O
ATOM 2 P A B1927 97.399 116.484 104.077 1.00 48.66 P
ATOM 3 OP1 A B1927 97.580 115.037 103.805 1.00 49.02 O
ATOM 4 OP2 A B1927 96.144 117.164 103.656 1.00 47.27 O
ATOM 5 O5' A B1927 97.591 116.714 105.635 1.00 48.34 O
ATOM 6 C5' A B1927 98.746 116.207 106.304 1.00 50.65 C
ATOM 7 C4' A B1927 98.346 115.551 107.597 1.00 52.21 C
ATOM 8 O4' A B1927 99.537 115.013 108.232 1.00 52.94 O
ATOM 9 C3' A B1927 97.703 116.484 108.614 1.00 52.20 C
ATOM 10 O3' A B1927 96.782 115.745 109.404 1.00 52.89 O
ATOM 11 C2' A B1927 98.894 116.908 109.462 1.00 52.82 C
ATOM 12 O2' A B1927 98.508 117.304 110.760 1.00 54.99 O
ATOM 13 C1' A B1927 99.723 115.622 109.490 1.00 53.49 C
ATOM 14 N9 A B1927 101.157 115.850 109.666 1.00 55.54 N
ATOM 15 C8 A B1927 102.005 116.552 108.843 1.00 55.87 C
ATOM 16 N7 A B1927 103.239 116.609 109.279 1.00 56.63 N
ATOM 17 C5 A B1927 103.209 115.889 110.463 1.00 57.23 C
ATOM 18 C6 A B1927 104.202 115.582 111.406 1.00 57.73 C
ATOM 19 N6 A B1927 105.468 115.984 111.299 1.00 58.67 N
ATOM 20 N1 A B1927 103.846 114.841 112.478 1.00 58.58 N
ATOM 21 C2 A B1927 102.571 114.442 112.586 1.00 58.62 C
ATOM 22 N3 A B1927 101.544 114.669 111.768 1.00 58.11 N
ATOM 23 C4 A B1927 101.934 115.407 110.712 1.00 57.40 C
ATOM 24 P C B1928 95.210 116.061 109.315 1.00 54.01 P
ATOM 25 OP1 C B1928 94.905 116.530 107.938 1.00 54.50 O
ATOM 26 OP2 C B1928 94.855 116.915 110.477 1.00 54.61 O
ATOM 27 O5' C B1928 94.550 114.629 109.537 1.00 52.42 O
TER
ATOM 2 P G A2479 86.967 112.113 104.462 1.00 77.85 P
ATOM 3 OP1 G A2479 87.886 111.198 103.715 1.00 76.66 O
ATOM 4 OP2 G A2479 87.005 112.142 105.948 1.00 77.26 O
ATOM 5 O5' G A2479 87.176 113.606 103.937 1.00 71.83 O
ATOM 6 C5' G A2479 88.123 113.894 102.895 1.00 61.47 C
ATOM 7 C4' G A2479 89.399 114.454 103.483 1.00 54.46 C
ATOM 8 O4' G A2479 90.503 114.078 102.627 1.00 52.30 O
ATOM 9 C3' G A2479 89.510 115.967 103.609 1.00 50.78 C
ATOM 10 O3' G A2479 88.922 116.496 104.790 1.00 46.55 O
ATOM 11 C2' G A2479 91.015 116.166 103.611 1.00 50.09 C
ATOM 12 O2' G A2479 91.586 115.847 104.860 1.00 51.34 O
ATOM 13 C1' G A2479 91.445 115.131 102.573 1.00 49.94 C
ATOM 14 N9 G A2479 91.424 115.687 101.224 1.00 48.46 N
ATOM 15 C8 G A2479 90.431 115.560 100.284 1.00 48.44 C
ATOM 16 N7 G A2479 90.679 116.217 99.187 1.00 48.67 N
ATOM 17 C5 G A2479 91.915 116.804 99.415 1.00 48.08 C
ATOM 18 C6 G A2479 92.691 117.644 98.594 1.00 48.70 C
ATOM 19 O6 G A2479 92.431 118.072 97.462 1.00 50.54 O
ATOM 20 N1 G A2479 93.884 117.994 99.211 1.00 48.05 N
ATOM 21 C2 G A2479 94.275 117.593 100.456 1.00 47.45 C
ATOM 22 N2 G A2479 95.469 118.015 100.870 1.00 48.98 N
ATOM 23 N3 G A2479 93.552 116.828 101.238 1.00 48.37 N
ATOM 24 C4 G A2479 92.393 116.471 100.659 1.00 48.04 C
ATOM 25 P G A2480 88.392 118.014 104.805 1.00 45.18 P
ATOM 26 OP1 G A2480 87.788 118.269 106.137 1.00 45.40 O
ATOM 27 OP2 G A2480 87.591 118.243 103.580 1.00 48.39 O
ATOM 28 O5' G A2480 89.701 118.909 104.683 1.00 44.69 O
TER
ATOM 1 O3' U B1926 98.654 117.235 103.412 1.00 47.85 O
ATOM 2 P A B1927 97.399 116.484 104.077 1.00 48.66 P
ATOM 3 OP1 A B1927 97.580 115.037 103.805 1.00 49.02 O
ATOM 4 OP2 A B1927 96.144 117.164 103.656 1.00 47.27 O
ATOM 5 O5' A B1927 97.591 116.714 105.635 1.00 48.34 O
ATOM 6 C5' A B1927 98.746 116.207 106.304 1.00 50.65 C
ATOM 7 C4' A B1927 98.346 115.551 107.597 1.00 52.21 C
ATOM 8 O4' A B1927 99.537 115.013 108.232 1.00 52.94 O
ATOM 9 C3' A B1927 97.703 116.484 108.614 1.00 52.20 C
ATOM 10 O3' A B1927 96.782 115.745 109.404 1.00 52.89 O
ATOM 11 C2' A B1927 98.894 116.908 109.462 1.00 52.82 C
ATOM 12 O2' A B1927 98.508 117.304 110.760 1.00 54.99 O
ATOM 13 C1' A B1927 99.723 115.622 109.490 1.00 53.49 C
ATOM 14 N9 A B1927 101.157 115.850 109.666 1.00 55.54 N
ATOM 15 C8 A B1927 102.005 116.552 108.843 1.00 55.87 C
ATOM 16 N7 A B1927 103.239 116.609 109.279 1.00 56.63 N
ATOM 17 C5 A B1927 103.209 115.889 110.463 1.00 57.23 C
ATOM 18 C6 A B1927 104.202 115.582 111.406 1.00 57.73 C
ATOM 19 N6 A B1927 105.468 115.984 111.299 1.00 58.67 N
ATOM 20 N1 A B1927 103.846 114.841 112.478 1.00 58.58 N
ATOM 21 C2 A B1927 102.571 114.442 112.586 1.00 58.62 C
ATOM 22 N3 A B1927 101.544 114.669 111.768 1.00 58.11 N
ATOM 23 C4 A B1927 101.934 115.407 110.712 1.00 57.40 C
ATOM 24 P C B1928 95.210 116.061 109.315 1.00 54.01 P
ATOM 25 OP1 C B1928 94.905 116.530 107.938 1.00 54.50 O
ATOM 26 OP2 C B1928 94.855 116.915 110.477 1.00 54.61 O
ATOM 27 O5' C B1928 94.550 114.629 109.537 1.00 52.42 O
TER
Atoms:
OP1: (87.886,111.198,103.715)
OP2: (87.005,112.142,105.948)
C3': (89.510,115.967,103.609)
C1': (91.445,115.131,102.573)
C5': (88.123,113.894,102.895)
O6: (92.431,118.072,97.462)
O4': (90.503,114.078,102.627)
C8: (90.431,115.560,100.284)
C2: (94.275,117.593,100.456)
C6: (92.691,117.644,98.594)
C5: (91.915,116.804,99.415)
C4: (92.393,116.471,100.659)
P: (86.967,112.113,104.462)
C4': (89.399,114.454,103.483)
C2': (91.015,116.166,103.611)
O2': (91.586,115.847,104.860)
N1: (93.884,117.994,99.211)
N2: (95.469,118.015,100.870)
N3: (93.552,116.828,101.238)
N7: (90.679,116.217,99.187)
N9: (91.424,115.687,101.224)
O5': (87.176,113.606,103.937)
O3': (88.922,116.496,104.790)
OP2: (87.005,112.142,105.948)
C3': (89.510,115.967,103.609)
C1': (91.445,115.131,102.573)
C5': (88.123,113.894,102.895)
O6: (92.431,118.072,97.462)
O4': (90.503,114.078,102.627)
C8: (90.431,115.560,100.284)
C2: (94.275,117.593,100.456)
C6: (92.691,117.644,98.594)
C5: (91.915,116.804,99.415)
C4: (92.393,116.471,100.659)
P: (86.967,112.113,104.462)
C4': (89.399,114.454,103.483)
C2': (91.015,116.166,103.611)
O2': (91.586,115.847,104.860)
N1: (93.884,117.994,99.211)
N2: (95.469,118.015,100.870)
N3: (93.552,116.828,101.238)
N7: (90.679,116.217,99.187)
N9: (91.424,115.687,101.224)
O5': (87.176,113.606,103.937)
O3': (88.922,116.496,104.790)
OP1: (97.580,115.037,103.805)
OP2: (96.144,117.164,103.656)
C3': (97.703,116.484,108.614)
C1': (99.723,115.622,109.490)
C5': (98.746,116.207,106.304)
O4': (99.537,115.013,108.232)
C8: (102.005,116.552,108.843)
O2': (98.508,117.304,110.760)
C6: (104.202,115.582,111.406)
C5: (103.209,115.889,110.463)
C4: (101.934,115.407,110.712)
P: (97.399,116.484,104.077)
C4': (98.346,115.551,107.597)
C2': (98.894,116.908,109.462)
C2: (102.571,114.442,112.586)
N1: (103.846,114.841,112.478)
N3: (101.544,114.669,111.768)
N6: (105.468,115.984,111.299)
N7: (103.239,116.609,109.279)
N9: (101.157,115.850,109.666)
O5': (97.591,116.714,105.635)
O3': (96.782,115.745,109.404)
OP2: (96.144,117.164,103.656)
C3': (97.703,116.484,108.614)
C1': (99.723,115.622,109.490)
C5': (98.746,116.207,106.304)
O4': (99.537,115.013,108.232)
C8: (102.005,116.552,108.843)
O2': (98.508,117.304,110.760)
C6: (104.202,115.582,111.406)
C5: (103.209,115.889,110.463)
C4: (101.934,115.407,110.712)
P: (97.399,116.484,104.077)
C4': (98.346,115.551,107.597)
C2': (98.894,116.908,109.462)
C2: (102.571,114.442,112.586)
N1: (103.846,114.841,112.478)
N3: (101.544,114.669,111.768)
N6: (105.468,115.984,111.299)
N7: (103.239,116.609,109.279)
N9: (101.157,115.850,109.666)
O5': (97.591,116.714,105.635)
O3': (96.782,115.745,109.404)
Image (generated by PyMOL):