Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U9S:A106:A85
Extra
PDB:
ATOM 1 O3' A A 105 63.432 -10.511 122.378 1.00 53.12 O
ATOM 2 P G A 106 62.650 -9.195 121.932 1.00 56.86 P
ATOM 3 OP1 G A 106 62.579 -9.105 120.443 1.00 41.10 O
ATOM 4 OP2 G A 106 63.287 -8.097 122.731 1.00 47.89 O
ATOM 5 O5' G A 106 61.195 -9.407 122.549 1.00 52.39 O
ATOM 6 C5' G A 106 60.612 -8.377 123.341 1.00 53.31 C
ATOM 7 C4' G A 106 59.348 -8.860 123.987 1.00 48.34 C
ATOM 8 O4' G A 106 59.666 -9.398 125.290 1.00 53.90 O
ATOM 9 C3' G A 106 58.390 -7.744 124.325 1.00 49.02 C
ATOM 10 O3' G A 106 57.596 -7.408 123.213 1.00 42.43 O
ATOM 11 C2' G A 106 57.554 -8.353 125.427 1.00 47.79 C
ATOM 12 O2' G A 106 56.663 -9.292 124.861 1.00 54.18 O
ATOM 13 C1' G A 106 58.615 -9.118 126.197 1.00 44.79 C
ATOM 14 N9 G A 106 59.172 -8.407 127.336 1.00 42.22 N
ATOM 15 C8 G A 106 60.474 -8.007 127.504 1.00 39.56 C
ATOM 16 N7 G A 106 60.701 -7.496 128.687 1.00 47.42 N
ATOM 17 C5 G A 106 59.465 -7.535 129.324 1.00 40.86 C
ATOM 18 C6 G A 106 59.090 -7.133 130.636 1.00 40.75 C
ATOM 19 O6 G A 106 59.803 -6.654 131.529 1.00 51.97 O
ATOM 20 N1 G A 106 57.733 -7.341 130.872 1.00 34.15 N
ATOM 21 C2 G A 106 56.855 -7.878 129.968 1.00 42.77 C
ATOM 22 N2 G A 106 55.585 -8.012 130.381 1.00 42.45 N
ATOM 23 N3 G A 106 57.194 -8.263 128.742 1.00 47.88 N
ATOM 24 C4 G A 106 58.506 -8.067 128.494 1.00 44.36 C
ATOM 25 P A A 107 57.092 -5.909 123.077 1.00 43.55 P
ATOM 26 OP1 A A 107 56.562 -5.799 121.690 1.00 30.93 O
ATOM 27 OP2 A A 107 58.204 -5.019 123.525 1.00 34.61 O
ATOM 28 O5' A A 107 55.912 -5.809 124.155 1.00 37.04 O
TER
ATOM 1 O3' C B 84 55.045 -11.043 128.528 1.00 56.62 O
ATOM 2 P A B 85 53.475 -10.736 128.637 1.00 57.47 P
ATOM 3 OP1 A B 85 53.313 -9.305 129.004 1.00 62.70 O
ATOM 4 OP2 A B 85 52.858 -11.772 129.499 1.00 57.41 O
ATOM 5 O5' A B 85 52.976 -10.944 127.144 1.00 46.32 O
ATOM 6 C5' A B 85 53.166 -9.941 126.146 1.00 55.64 C
ATOM 7 C4' A B 85 52.672 -10.484 124.838 1.00 62.99 C
ATOM 8 O4' A B 85 53.344 -11.742 124.632 1.00 67.31 O
ATOM 9 C3' A B 85 51.189 -10.811 124.812 1.00 61.24 C
ATOM 10 O3' A B 85 50.458 -9.601 124.476 1.00 59.58 O
ATOM 11 C2' A B 85 51.105 -11.975 123.833 1.00 64.36 C
ATOM 12 O2' A B 85 50.996 -11.627 122.476 1.00 83.63 O
ATOM 13 C1' A B 85 52.452 -12.673 124.067 1.00 68.00 C
ATOM 14 N9 A B 85 52.518 -13.860 124.909 1.00 67.81 N
ATOM 15 C8 A B 85 52.307 -13.957 126.259 1.00 74.78 C
ATOM 16 N7 A B 85 52.537 -15.158 126.742 1.00 75.18 N
ATOM 17 C5 A B 85 52.905 -15.900 125.628 1.00 69.67 C
ATOM 18 C6 A B 85 53.275 -17.240 125.469 1.00 68.61 C
ATOM 19 N6 A B 85 53.351 -18.111 126.476 1.00 68.89 N
ATOM 20 N1 A B 85 53.575 -17.664 124.226 1.00 68.62 N
ATOM 21 C2 A B 85 53.515 -16.788 123.220 1.00 67.88 C
ATOM 22 N3 A B 85 53.189 -15.503 123.245 1.00 66.12 N
ATOM 23 C4 A B 85 52.886 -15.117 124.492 1.00 66.60 C
ATOM 24 P A B 86 50.430 -8.994 122.954 1.00 50.42 P
ATOM 25 OP1 A B 86 50.125 -7.540 123.101 1.00 59.98 O
ATOM 26 OP2 A B 86 49.551 -9.801 122.080 1.00 46.58 O
ATOM 27 O5' A B 86 51.929 -9.096 122.416 1.00 36.44 O
TER
ATOM 2 P G A 106 62.650 -9.195 121.932 1.00 56.86 P
ATOM 3 OP1 G A 106 62.579 -9.105 120.443 1.00 41.10 O
ATOM 4 OP2 G A 106 63.287 -8.097 122.731 1.00 47.89 O
ATOM 5 O5' G A 106 61.195 -9.407 122.549 1.00 52.39 O
ATOM 6 C5' G A 106 60.612 -8.377 123.341 1.00 53.31 C
ATOM 7 C4' G A 106 59.348 -8.860 123.987 1.00 48.34 C
ATOM 8 O4' G A 106 59.666 -9.398 125.290 1.00 53.90 O
ATOM 9 C3' G A 106 58.390 -7.744 124.325 1.00 49.02 C
ATOM 10 O3' G A 106 57.596 -7.408 123.213 1.00 42.43 O
ATOM 11 C2' G A 106 57.554 -8.353 125.427 1.00 47.79 C
ATOM 12 O2' G A 106 56.663 -9.292 124.861 1.00 54.18 O
ATOM 13 C1' G A 106 58.615 -9.118 126.197 1.00 44.79 C
ATOM 14 N9 G A 106 59.172 -8.407 127.336 1.00 42.22 N
ATOM 15 C8 G A 106 60.474 -8.007 127.504 1.00 39.56 C
ATOM 16 N7 G A 106 60.701 -7.496 128.687 1.00 47.42 N
ATOM 17 C5 G A 106 59.465 -7.535 129.324 1.00 40.86 C
ATOM 18 C6 G A 106 59.090 -7.133 130.636 1.00 40.75 C
ATOM 19 O6 G A 106 59.803 -6.654 131.529 1.00 51.97 O
ATOM 20 N1 G A 106 57.733 -7.341 130.872 1.00 34.15 N
ATOM 21 C2 G A 106 56.855 -7.878 129.968 1.00 42.77 C
ATOM 22 N2 G A 106 55.585 -8.012 130.381 1.00 42.45 N
ATOM 23 N3 G A 106 57.194 -8.263 128.742 1.00 47.88 N
ATOM 24 C4 G A 106 58.506 -8.067 128.494 1.00 44.36 C
ATOM 25 P A A 107 57.092 -5.909 123.077 1.00 43.55 P
ATOM 26 OP1 A A 107 56.562 -5.799 121.690 1.00 30.93 O
ATOM 27 OP2 A A 107 58.204 -5.019 123.525 1.00 34.61 O
ATOM 28 O5' A A 107 55.912 -5.809 124.155 1.00 37.04 O
TER
ATOM 1 O3' C B 84 55.045 -11.043 128.528 1.00 56.62 O
ATOM 2 P A B 85 53.475 -10.736 128.637 1.00 57.47 P
ATOM 3 OP1 A B 85 53.313 -9.305 129.004 1.00 62.70 O
ATOM 4 OP2 A B 85 52.858 -11.772 129.499 1.00 57.41 O
ATOM 5 O5' A B 85 52.976 -10.944 127.144 1.00 46.32 O
ATOM 6 C5' A B 85 53.166 -9.941 126.146 1.00 55.64 C
ATOM 7 C4' A B 85 52.672 -10.484 124.838 1.00 62.99 C
ATOM 8 O4' A B 85 53.344 -11.742 124.632 1.00 67.31 O
ATOM 9 C3' A B 85 51.189 -10.811 124.812 1.00 61.24 C
ATOM 10 O3' A B 85 50.458 -9.601 124.476 1.00 59.58 O
ATOM 11 C2' A B 85 51.105 -11.975 123.833 1.00 64.36 C
ATOM 12 O2' A B 85 50.996 -11.627 122.476 1.00 83.63 O
ATOM 13 C1' A B 85 52.452 -12.673 124.067 1.00 68.00 C
ATOM 14 N9 A B 85 52.518 -13.860 124.909 1.00 67.81 N
ATOM 15 C8 A B 85 52.307 -13.957 126.259 1.00 74.78 C
ATOM 16 N7 A B 85 52.537 -15.158 126.742 1.00 75.18 N
ATOM 17 C5 A B 85 52.905 -15.900 125.628 1.00 69.67 C
ATOM 18 C6 A B 85 53.275 -17.240 125.469 1.00 68.61 C
ATOM 19 N6 A B 85 53.351 -18.111 126.476 1.00 68.89 N
ATOM 20 N1 A B 85 53.575 -17.664 124.226 1.00 68.62 N
ATOM 21 C2 A B 85 53.515 -16.788 123.220 1.00 67.88 C
ATOM 22 N3 A B 85 53.189 -15.503 123.245 1.00 66.12 N
ATOM 23 C4 A B 85 52.886 -15.117 124.492 1.00 66.60 C
ATOM 24 P A B 86 50.430 -8.994 122.954 1.00 50.42 P
ATOM 25 OP1 A B 86 50.125 -7.540 123.101 1.00 59.98 O
ATOM 26 OP2 A B 86 49.551 -9.801 122.080 1.00 46.58 O
ATOM 27 O5' A B 86 51.929 -9.096 122.416 1.00 36.44 O
TER
Atoms:
OP1: (62.579,-9.105,120.443)
OP2: (63.287,-8.097,122.731)
C3': (58.390,-7.744,124.325)
C1': (58.615,-9.118,126.197)
C5': (60.612,-8.377,123.341)
O6: (59.803,-6.654,131.529)
O4': (59.666,-9.398,125.290)
C8: (60.474,-8.007,127.504)
C2: (56.855,-7.878,129.968)
C6: (59.090,-7.133,130.636)
C5: (59.465,-7.535,129.324)
C4: (58.506,-8.067,128.494)
P: (62.650,-9.195,121.932)
C4': (59.348,-8.860,123.987)
C2': (57.554,-8.353,125.427)
O2': (56.663,-9.292,124.861)
N1: (57.733,-7.341,130.872)
N2: (55.585,-8.012,130.381)
N3: (57.194,-8.263,128.742)
N7: (60.701,-7.496,128.687)
N9: (59.172,-8.407,127.336)
O5': (61.195,-9.407,122.549)
O3': (57.596,-7.408,123.213)
OP2: (63.287,-8.097,122.731)
C3': (58.390,-7.744,124.325)
C1': (58.615,-9.118,126.197)
C5': (60.612,-8.377,123.341)
O6: (59.803,-6.654,131.529)
O4': (59.666,-9.398,125.290)
C8: (60.474,-8.007,127.504)
C2: (56.855,-7.878,129.968)
C6: (59.090,-7.133,130.636)
C5: (59.465,-7.535,129.324)
C4: (58.506,-8.067,128.494)
P: (62.650,-9.195,121.932)
C4': (59.348,-8.860,123.987)
C2': (57.554,-8.353,125.427)
O2': (56.663,-9.292,124.861)
N1: (57.733,-7.341,130.872)
N2: (55.585,-8.012,130.381)
N3: (57.194,-8.263,128.742)
N7: (60.701,-7.496,128.687)
N9: (59.172,-8.407,127.336)
O5': (61.195,-9.407,122.549)
O3': (57.596,-7.408,123.213)
OP1: (53.313,-9.305,129.004)
OP2: (52.858,-11.772,129.499)
C3': (51.189,-10.811,124.812)
C1': (52.452,-12.673,124.067)
C5': (53.166,-9.941,126.146)
O4': (53.344,-11.742,124.632)
C8: (52.307,-13.957,126.259)
O2': (50.996,-11.627,122.476)
C6: (53.275,-17.240,125.469)
C5: (52.905,-15.900,125.628)
C4: (52.886,-15.117,124.492)
P: (53.475,-10.736,128.637)
C4': (52.672,-10.484,124.838)
C2': (51.105,-11.975,123.833)
C2: (53.515,-16.788,123.220)
N1: (53.575,-17.664,124.226)
N3: (53.189,-15.503,123.245)
N6: (53.351,-18.111,126.476)
N7: (52.537,-15.158,126.742)
N9: (52.518,-13.860,124.909)
O5': (52.976,-10.944,127.144)
O3': (50.458,-9.601,124.476)
OP2: (52.858,-11.772,129.499)
C3': (51.189,-10.811,124.812)
C1': (52.452,-12.673,124.067)
C5': (53.166,-9.941,126.146)
O4': (53.344,-11.742,124.632)
C8: (52.307,-13.957,126.259)
O2': (50.996,-11.627,122.476)
C6: (53.275,-17.240,125.469)
C5: (52.905,-15.900,125.628)
C4: (52.886,-15.117,124.492)
P: (53.475,-10.736,128.637)
C4': (52.672,-10.484,124.838)
C2': (51.105,-11.975,123.833)
C2: (53.515,-16.788,123.220)
N1: (53.575,-17.664,124.226)
N3: (53.189,-15.503,123.245)
N6: (53.351,-18.111,126.476)
N7: (52.537,-15.158,126.742)
N9: (52.518,-13.860,124.909)
O5': (52.976,-10.944,127.144)
O3': (50.458,-9.601,124.476)
Image (generated by PyMOL):