Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1053:A1039
Extra
PDB:
ATOM 1 O3' U A1052 -133.542 -75.382 -31.461 1.00144.12 O
ATOM 2 P G A1053 -132.920 -75.239 -29.996 1.00140.04 P
ATOM 3 OP1 G A1053 -134.038 -75.182 -29.025 1.00121.83 O
ATOM 4 OP2 G A1053 -131.911 -74.148 -30.030 1.00111.36 O
ATOM 5 O5' G A1053 -132.143 -76.631 -29.832 1.00123.61 O
ATOM 6 C5' G A1053 -130.991 -76.909 -30.627 1.00113.25 C
ATOM 7 C4' G A1053 -130.327 -78.194 -30.165 1.00115.88 C
ATOM 8 O4' G A1053 -129.650 -77.960 -28.908 1.00111.08 O
ATOM 9 C3' G A1053 -131.281 -79.337 -29.869 1.00122.07 C
ATOM 10 O3' G A1053 -131.507 -80.083 -31.031 1.00125.05 O
ATOM 11 C2' G A1053 -130.489 -80.163 -28.872 1.00113.48 C
ATOM 12 O2' G A1053 -129.506 -80.947 -29.516 1.00122.95 O
ATOM 13 C1' G A1053 -129.815 -79.075 -28.050 1.00107.23 C
ATOM 14 N9 G A1053 -130.579 -78.659 -26.875 1.00108.66 N
ATOM 15 C8 G A1053 -131.403 -77.564 -26.750 1.00110.11 C
ATOM 16 N7 G A1053 -131.948 -77.449 -25.569 1.00 99.55 N
ATOM 17 C5 G A1053 -131.454 -78.536 -24.867 1.00100.73 C
ATOM 18 C6 G A1053 -131.697 -78.938 -23.538 1.00 98.98 C
ATOM 19 O6 G A1053 -132.422 -78.391 -22.694 1.00 99.98 O
ATOM 20 N1 G A1053 -130.999 -80.107 -23.230 1.00 98.35 N
ATOM 21 C2 G A1053 -130.169 -80.797 -24.097 1.00101.56 C
ATOM 22 N2 G A1053 -129.571 -81.907 -23.623 1.00 96.15 N
ATOM 23 N3 G A1053 -129.938 -80.421 -25.349 1.00 98.80 N
ATOM 24 C4 G A1053 -130.612 -79.289 -25.657 1.00103.02 C
ATOM 25 P U A1054 -132.964 -80.693 -31.204 1.00113.46 P
ATOM 26 OP1 U A1054 -132.980 -81.486 -32.452 1.00103.93 O
ATOM 27 OP2 U A1054 -133.936 -79.599 -30.982 1.00104.85 O
ATOM 28 O5' U A1054 -133.076 -81.690 -29.967 1.00 96.65 O
TER
ATOM 1 O3' U B1038 -127.618 -84.696 -23.616 1.00 88.91 O
ATOM 2 P A B1039 -127.836 -84.657 -25.189 1.00109.83 P
ATOM 3 OP1 A B1039 -128.162 -83.256 -25.541 1.00 83.92 O
ATOM 4 OP2 A B1039 -128.762 -85.762 -25.525 1.00109.86 O
ATOM 5 O5' A B1039 -126.403 -85.029 -25.782 1.00 90.58 O
ATOM 6 C5' A B1039 -125.500 -84.000 -26.137 1.00 90.62 C
ATOM 7 C4' A B1039 -124.169 -84.602 -26.536 1.00 94.02 C
ATOM 8 O4' A B1039 -123.898 -85.691 -25.626 1.00101.30 O
ATOM 9 C3' A B1039 -124.100 -85.184 -27.949 1.00112.59 C
ATOM 10 O3' A B1039 -122.887 -84.814 -28.604 1.00114.42 O
ATOM 11 C2' A B1039 -124.165 -86.698 -27.754 1.00106.76 C
ATOM 12 O2' A B1039 -123.361 -87.392 -28.692 1.00 97.75 O
ATOM 13 C1' A B1039 -123.582 -86.861 -26.356 1.00105.40 C
ATOM 14 N9 A B1039 -124.089 -88.030 -25.638 1.00101.53 N
ATOM 15 C8 A B1039 -125.161 -88.102 -24.789 1.00101.71 C
ATOM 16 N7 A B1039 -125.358 -89.303 -24.295 1.00 96.75 N
ATOM 17 C5 A B1039 -124.347 -90.070 -24.859 1.00 96.58 C
ATOM 18 C6 A B1039 -123.994 -91.437 -24.745 1.00104.78 C
ATOM 19 N6 A B1039 -124.652 -92.325 -23.984 1.00109.06 N
ATOM 20 N1 A B1039 -122.921 -91.863 -25.449 1.00105.25 N
ATOM 21 C2 A B1039 -122.256 -90.985 -26.212 1.00 99.31 C
ATOM 22 N3 A B1039 -122.493 -89.688 -26.398 1.00 95.93 N
ATOM 23 C4 A B1039 -123.558 -89.294 -25.686 1.00 94.73 C
ATOM 24 P A B1040 -122.576 -83.285 -28.954 1.00114.97 P
ATOM 25 OP1 A B1040 -123.811 -82.653 -29.469 1.00113.59 O
ATOM 26 OP2 A B1040 -121.353 -83.268 -29.784 1.00105.80 O
ATOM 27 O5' A B1040 -122.239 -82.638 -27.528 1.00 97.01 O
TER
ATOM 2 P G A1053 -132.920 -75.239 -29.996 1.00140.04 P
ATOM 3 OP1 G A1053 -134.038 -75.182 -29.025 1.00121.83 O
ATOM 4 OP2 G A1053 -131.911 -74.148 -30.030 1.00111.36 O
ATOM 5 O5' G A1053 -132.143 -76.631 -29.832 1.00123.61 O
ATOM 6 C5' G A1053 -130.991 -76.909 -30.627 1.00113.25 C
ATOM 7 C4' G A1053 -130.327 -78.194 -30.165 1.00115.88 C
ATOM 8 O4' G A1053 -129.650 -77.960 -28.908 1.00111.08 O
ATOM 9 C3' G A1053 -131.281 -79.337 -29.869 1.00122.07 C
ATOM 10 O3' G A1053 -131.507 -80.083 -31.031 1.00125.05 O
ATOM 11 C2' G A1053 -130.489 -80.163 -28.872 1.00113.48 C
ATOM 12 O2' G A1053 -129.506 -80.947 -29.516 1.00122.95 O
ATOM 13 C1' G A1053 -129.815 -79.075 -28.050 1.00107.23 C
ATOM 14 N9 G A1053 -130.579 -78.659 -26.875 1.00108.66 N
ATOM 15 C8 G A1053 -131.403 -77.564 -26.750 1.00110.11 C
ATOM 16 N7 G A1053 -131.948 -77.449 -25.569 1.00 99.55 N
ATOM 17 C5 G A1053 -131.454 -78.536 -24.867 1.00100.73 C
ATOM 18 C6 G A1053 -131.697 -78.938 -23.538 1.00 98.98 C
ATOM 19 O6 G A1053 -132.422 -78.391 -22.694 1.00 99.98 O
ATOM 20 N1 G A1053 -130.999 -80.107 -23.230 1.00 98.35 N
ATOM 21 C2 G A1053 -130.169 -80.797 -24.097 1.00101.56 C
ATOM 22 N2 G A1053 -129.571 -81.907 -23.623 1.00 96.15 N
ATOM 23 N3 G A1053 -129.938 -80.421 -25.349 1.00 98.80 N
ATOM 24 C4 G A1053 -130.612 -79.289 -25.657 1.00103.02 C
ATOM 25 P U A1054 -132.964 -80.693 -31.204 1.00113.46 P
ATOM 26 OP1 U A1054 -132.980 -81.486 -32.452 1.00103.93 O
ATOM 27 OP2 U A1054 -133.936 -79.599 -30.982 1.00104.85 O
ATOM 28 O5' U A1054 -133.076 -81.690 -29.967 1.00 96.65 O
TER
ATOM 1 O3' U B1038 -127.618 -84.696 -23.616 1.00 88.91 O
ATOM 2 P A B1039 -127.836 -84.657 -25.189 1.00109.83 P
ATOM 3 OP1 A B1039 -128.162 -83.256 -25.541 1.00 83.92 O
ATOM 4 OP2 A B1039 -128.762 -85.762 -25.525 1.00109.86 O
ATOM 5 O5' A B1039 -126.403 -85.029 -25.782 1.00 90.58 O
ATOM 6 C5' A B1039 -125.500 -84.000 -26.137 1.00 90.62 C
ATOM 7 C4' A B1039 -124.169 -84.602 -26.536 1.00 94.02 C
ATOM 8 O4' A B1039 -123.898 -85.691 -25.626 1.00101.30 O
ATOM 9 C3' A B1039 -124.100 -85.184 -27.949 1.00112.59 C
ATOM 10 O3' A B1039 -122.887 -84.814 -28.604 1.00114.42 O
ATOM 11 C2' A B1039 -124.165 -86.698 -27.754 1.00106.76 C
ATOM 12 O2' A B1039 -123.361 -87.392 -28.692 1.00 97.75 O
ATOM 13 C1' A B1039 -123.582 -86.861 -26.356 1.00105.40 C
ATOM 14 N9 A B1039 -124.089 -88.030 -25.638 1.00101.53 N
ATOM 15 C8 A B1039 -125.161 -88.102 -24.789 1.00101.71 C
ATOM 16 N7 A B1039 -125.358 -89.303 -24.295 1.00 96.75 N
ATOM 17 C5 A B1039 -124.347 -90.070 -24.859 1.00 96.58 C
ATOM 18 C6 A B1039 -123.994 -91.437 -24.745 1.00104.78 C
ATOM 19 N6 A B1039 -124.652 -92.325 -23.984 1.00109.06 N
ATOM 20 N1 A B1039 -122.921 -91.863 -25.449 1.00105.25 N
ATOM 21 C2 A B1039 -122.256 -90.985 -26.212 1.00 99.31 C
ATOM 22 N3 A B1039 -122.493 -89.688 -26.398 1.00 95.93 N
ATOM 23 C4 A B1039 -123.558 -89.294 -25.686 1.00 94.73 C
ATOM 24 P A B1040 -122.576 -83.285 -28.954 1.00114.97 P
ATOM 25 OP1 A B1040 -123.811 -82.653 -29.469 1.00113.59 O
ATOM 26 OP2 A B1040 -121.353 -83.268 -29.784 1.00105.80 O
ATOM 27 O5' A B1040 -122.239 -82.638 -27.528 1.00 97.01 O
TER
Atoms:
OP1: (-134.038,-75.182,-29.025)
OP2: (-131.911,-74.148,-30.030)
C3': (-131.281,-79.337,-29.869)
C1': (-129.815,-79.075,-28.050)
C5': (-130.991,-76.909,-30.627)
O6: (-132.422,-78.391,-22.694)
O4': (-129.650,-77.960,-28.908)
C8: (-131.403,-77.564,-26.750)
C2: (-130.169,-80.797,-24.097)
C6: (-131.697,-78.938,-23.538)
C5: (-131.454,-78.536,-24.867)
C4: (-130.612,-79.289,-25.657)
P: (-132.920,-75.239,-29.996)
C4': (-130.327,-78.194,-30.165)
C2': (-130.489,-80.163,-28.872)
O2': (-129.506,-80.947,-29.516)
N1: (-130.999,-80.107,-23.230)
N2: (-129.571,-81.907,-23.623)
N3: (-129.938,-80.421,-25.349)
N7: (-131.948,-77.449,-25.569)
N9: (-130.579,-78.659,-26.875)
O5': (-132.143,-76.631,-29.832)
O3': (-131.507,-80.083,-31.031)
OP2: (-131.911,-74.148,-30.030)
C3': (-131.281,-79.337,-29.869)
C1': (-129.815,-79.075,-28.050)
C5': (-130.991,-76.909,-30.627)
O6: (-132.422,-78.391,-22.694)
O4': (-129.650,-77.960,-28.908)
C8: (-131.403,-77.564,-26.750)
C2: (-130.169,-80.797,-24.097)
C6: (-131.697,-78.938,-23.538)
C5: (-131.454,-78.536,-24.867)
C4: (-130.612,-79.289,-25.657)
P: (-132.920,-75.239,-29.996)
C4': (-130.327,-78.194,-30.165)
C2': (-130.489,-80.163,-28.872)
O2': (-129.506,-80.947,-29.516)
N1: (-130.999,-80.107,-23.230)
N2: (-129.571,-81.907,-23.623)
N3: (-129.938,-80.421,-25.349)
N7: (-131.948,-77.449,-25.569)
N9: (-130.579,-78.659,-26.875)
O5': (-132.143,-76.631,-29.832)
O3': (-131.507,-80.083,-31.031)
OP1: (-128.162,-83.256,-25.541)
OP2: (-128.762,-85.762,-25.525)
C3': (-124.100,-85.184,-27.949)
C1': (-123.582,-86.861,-26.356)
C5': (-125.500,-84.000,-26.137)
O4': (-123.898,-85.691,-25.626)
C8: (-125.161,-88.102,-24.789)
O2': (-123.361,-87.392,-28.692)
C6: (-123.994,-91.437,-24.745)
C5: (-124.347,-90.070,-24.859)
C4: (-123.558,-89.294,-25.686)
P: (-127.836,-84.657,-25.189)
C4': (-124.169,-84.602,-26.536)
C2': (-124.165,-86.698,-27.754)
C2: (-122.256,-90.985,-26.212)
N1: (-122.921,-91.863,-25.449)
N3: (-122.493,-89.688,-26.398)
N6: (-124.652,-92.325,-23.984)
N7: (-125.358,-89.303,-24.295)
N9: (-124.089,-88.030,-25.638)
O5': (-126.403,-85.029,-25.782)
O3': (-122.887,-84.814,-28.604)
OP2: (-128.762,-85.762,-25.525)
C3': (-124.100,-85.184,-27.949)
C1': (-123.582,-86.861,-26.356)
C5': (-125.500,-84.000,-26.137)
O4': (-123.898,-85.691,-25.626)
C8: (-125.161,-88.102,-24.789)
O2': (-123.361,-87.392,-28.692)
C6: (-123.994,-91.437,-24.745)
C5: (-124.347,-90.070,-24.859)
C4: (-123.558,-89.294,-25.686)
P: (-127.836,-84.657,-25.189)
C4': (-124.169,-84.602,-26.536)
C2': (-124.165,-86.698,-27.754)
C2: (-122.256,-90.985,-26.212)
N1: (-122.921,-91.863,-25.449)
N3: (-122.493,-89.688,-26.398)
N6: (-124.652,-92.325,-23.984)
N7: (-125.358,-89.303,-24.295)
N9: (-124.089,-88.030,-25.638)
O5': (-126.403,-85.029,-25.782)
O3': (-122.887,-84.814,-28.604)
Image (generated by PyMOL):