ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Y39:C17:C45

Extra

PDB:
ATOM 1 O3' A A 16 120.840 87.335 15.034 1.00 56.14 O
ATOM 2 P G A 17 119.340 87.146 14.525 1.00 57.37 P
ATOM 3 OP1 G A 17 118.685 85.965 15.182 1.00 53.81 O
ATOM 4 OP2 G A 17 119.522 87.167 13.044 1.00 54.72 O
ATOM 5 O5' G A 17 118.652 88.473 15.075 1.00 54.40 O
ATOM 6 C5' G A 17 118.512 88.648 16.477 1.00 54.38 C
ATOM 7 C4' G A 17 118.007 90.029 16.797 1.00 55.67 C
ATOM 8 O4' G A 17 119.036 91.010 16.521 1.00 56.07 O
ATOM 9 C3' G A 17 116.790 90.501 16.027 1.00 56.21 C
ATOM 10 O3' G A 17 115.610 90.029 16.670 1.00 58.08 O
ATOM 11 C2' G A 17 116.923 92.018 16.120 1.00 55.30 C
ATOM 12 O2' G A 17 116.439 92.527 17.349 1.00 54.51 O
ATOM 13 C1' G A 17 118.444 92.202 16.037 1.00 53.87 C
ATOM 14 N9 G A 17 118.932 92.391 14.678 1.00 52.58 N
ATOM 15 C8 G A 17 119.171 91.397 13.757 1.00 51.95 C
ATOM 16 N7 G A 17 119.601 91.854 12.612 1.00 51.15 N
ATOM 17 C5 G A 17 119.645 93.232 12.783 1.00 50.23 C
ATOM 18 C6 G A 17 120.012 94.247 11.878 1.00 49.10 C
ATOM 19 O6 G A 17 120.364 94.132 10.701 1.00 50.15 O
ATOM 20 N1 G A 17 119.924 95.509 12.458 1.00 48.51 N
ATOM 21 C2 G A 17 119.513 95.760 13.741 1.00 49.27 C
ATOM 22 N2 G A 17 119.475 97.050 14.106 1.00 50.36 N
ATOM 23 N3 G A 17 119.158 94.817 14.600 1.00 50.29 N
ATOM 24 C4 G A 17 119.246 93.582 14.056 1.00 51.31 C
ATOM 25 P A A 18 114.568 89.125 15.848 1.00 60.87 P
ATOM 26 OP1 A A 18 113.553 88.577 16.788 1.00 59.35 O
ATOM 27 OP2 A A 18 115.379 88.187 15.012 1.00 60.04 O
ATOM 28 O5' A A 18 113.867 90.177 14.873 1.00 61.39 O
TER

ATOM 1 O3' A B 44 118.009 99.134 16.045 1.00 64.05 O
ATOM 2 P A B 45 116.445 99.428 15.824 1.00 63.57 P
ATOM 3 OP1 A B 45 116.192 99.443 14.356 1.00 63.52 O
ATOM 4 OP2 A B 45 116.105 100.621 16.638 1.00 62.81 O
ATOM 5 O5' A B 45 115.753 98.136 16.443 1.00 61.59 O
ATOM 6 C5' A B 45 115.895 96.872 15.797 1.00 61.37 C
ATOM 7 C4' A B 45 115.552 95.753 16.747 1.00 61.44 C
ATOM 8 O4' A B 45 116.501 95.742 17.850 1.00 61.06 O
ATOM 9 C3' A B 45 114.215 95.900 17.443 1.00 62.61 C
ATOM 10 O3' A B 45 113.103 95.540 16.619 1.00 65.24 O
ATOM 11 C2' A B 45 114.406 95.021 18.672 1.00 60.70 C
ATOM 12 O2' A B 45 114.346 93.641 18.370 1.00 61.53 O
ATOM 13 C1' A B 45 115.839 95.381 19.055 1.00 58.71 C
ATOM 14 N9 A B 45 115.913 96.515 19.975 1.00 56.53 N
ATOM 15 C8 A B 45 116.026 97.856 19.671 1.00 56.62 C
ATOM 16 N7 A B 45 116.060 98.637 20.726 1.00 53.55 N
ATOM 17 C5 A B 45 115.967 97.756 21.791 1.00 53.18 C
ATOM 18 C6 A B 45 115.945 97.958 23.167 1.00 53.11 C
ATOM 19 N6 A B 45 116.043 99.163 23.733 1.00 54.31 N
ATOM 20 N1 A B 45 115.824 96.872 23.960 1.00 52.56 N
ATOM 21 C2 A B 45 115.751 95.664 23.389 1.00 52.89 C
ATOM 22 N3 A B 45 115.775 95.342 22.101 1.00 53.70 N
ATOM 23 C4 A B 45 115.879 96.447 21.345 1.00 54.60 C
ATOM 24 P U B 46 111.723 96.337 16.802 1.00 65.60 P
ATOM 25 OP1 U B 46 110.612 95.402 16.506 1.00 65.70 O
ATOM 26 OP2 U B 46 111.839 97.617 16.047 1.00 64.58 O
ATOM 27 O5' U B 46 111.774 96.666 18.363 1.00 66.19 O
TER

Atoms:
OP1: (118.685,85.965,15.182)
OP2: (119.522,87.167,13.044)
C3': (116.790,90.501,16.027)
C1': (118.444,92.202,16.037)
C5': (118.512,88.648,16.477)
O6: (120.364,94.132,10.701)
O4': (119.036,91.010,16.521)
C8: (119.171,91.397,13.757)
C2: (119.513,95.760,13.741)
C6: (120.012,94.247,11.878)
C5: (119.645,93.232,12.783)
C4: (119.246,93.582,14.056)
P: (119.340,87.146,14.525)
C4': (118.007,90.029,16.797)
C2': (116.923,92.018,16.120)
O2': (116.439,92.527,17.349)
N1: (119.924,95.509,12.458)
N2: (119.475,97.050,14.106)
N3: (119.158,94.817,14.600)
N7: (119.601,91.854,12.612)
N9: (118.932,92.391,14.678)
O5': (118.652,88.473,15.075)
O3': (115.610,90.029,16.670)
OP1: (116.192,99.443,14.356)
OP2: (116.105,100.621,16.638)
C3': (114.215,95.900,17.443)
C1': (115.839,95.381,19.055)
C5': (115.895,96.872,15.797)
O4': (116.501,95.742,17.850)
C8: (116.026,97.856,19.671)
O2': (114.346,93.641,18.370)
C6: (115.945,97.958,23.167)
C5: (115.967,97.756,21.791)
C4: (115.879,96.447,21.345)
P: (116.445,99.428,15.824)
C4': (115.552,95.753,16.747)
C2': (114.406,95.021,18.672)
C2: (115.751,95.664,23.389)
N1: (115.824,96.872,23.960)
N3: (115.775,95.342,22.101)
N6: (116.043,99.163,23.733)
N7: (116.060,98.637,20.726)
N9: (115.913,96.515,19.975)
O5': (115.753,98.136,16.443)
O3': (113.103,95.540,16.619)
Image (generated by PyMOL):
PyMOL image
show in jmol