ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIR:A50:A51

Extra

PDB:
ATOM 1 O3' A A 49 -18.239 50.749 4.601 1.00 23.36 O
ATOM 2 P A A 50 -18.623 52.228 4.124 1.00 23.42 P
ATOM 3 OP1 A A 50 -20.078 52.432 4.313 1.00 22.97 O
ATOM 4 OP2 A A 50 -18.033 52.433 2.783 1.00 23.54 O
ATOM 5 O5' A A 50 -17.822 53.146 5.170 1.00 24.38 O
ATOM 6 C5' A A 50 -18.281 53.239 6.531 1.00 25.03 C
ATOM 7 C4' A A 50 -17.259 53.818 7.503 1.00 24.83 C
ATOM 8 O4' A A 50 -15.996 53.103 7.424 1.00 24.07 O
ATOM 9 C3' A A 50 -16.868 55.276 7.288 1.00 25.18 C
ATOM 10 O3' A A 50 -17.866 56.177 7.769 1.00 26.30 O
ATOM 11 C2' A A 50 -15.570 55.337 8.085 1.00 24.67 C
ATOM 12 O2' A A 50 -15.788 55.424 9.481 1.00 25.21 O
ATOM 13 C1' A A 50 -14.928 53.996 7.704 1.00 23.53 C
ATOM 14 N9 A A 50 -14.058 54.119 6.524 1.00 22.53 N
ATOM 15 C8 A A 50 -14.369 53.817 5.212 1.00 22.35 C
ATOM 16 N7 A A 50 -13.395 54.044 4.362 1.00 22.13 N
ATOM 17 C5 A A 50 -12.372 54.540 5.167 1.00 21.80 C
ATOM 18 C6 A A 50 -11.059 54.980 4.881 1.00 21.59 C
ATOM 19 N6 A A 50 -10.537 54.981 3.646 1.00 22.06 N
ATOM 20 N1 A A 50 -10.288 55.414 5.916 1.00 21.22 N
ATOM 21 C2 A A 50 -10.807 55.410 7.156 1.00 21.06 C
ATOM 22 N3 A A 50 -12.025 55.025 7.546 1.00 20.95 N
ATOM 23 C4 A A 50 -12.764 54.593 6.501 1.00 21.56 C
ATOM 24 P U A 51 -18.544 57.192 6.721 1.00 27.73 P
ATOM 25 OP1 U A 51 -19.760 57.796 7.326 1.00 27.56 O
ATOM 26 OP2 U A 51 -18.666 56.483 5.425 1.00 27.57 O
ATOM 27 O5' U A 51 -17.406 58.312 6.558 1.00 28.23 O
TER

ATOM 1 O3' A B 50 -17.866 56.177 7.769 1.00 26.30 O
ATOM 2 P U B 51 -18.544 57.192 6.721 1.00 27.73 P
ATOM 3 OP1 U B 51 -19.760 57.796 7.326 1.00 27.56 O
ATOM 4 OP2 U B 51 -18.666 56.483 5.425 1.00 27.57 O
ATOM 5 O5' U B 51 -17.406 58.312 6.558 1.00 28.23 O
ATOM 6 C5' U B 51 -17.088 59.212 7.621 1.00 28.67 C
ATOM 7 C4' U B 51 -16.318 60.410 7.094 1.00 29.11 C
ATOM 8 O4' U B 51 -15.022 59.946 6.640 1.00 29.52 O
ATOM 9 C3' U B 51 -16.980 61.144 5.913 1.00 29.22 C
ATOM 10 O3' U B 51 -17.618 62.429 6.235 1.00 28.49 O
ATOM 11 C2' U B 51 -15.916 61.177 4.801 1.00 29.81 C
ATOM 12 O2' U B 51 -15.656 62.460 4.264 1.00 30.35 O
ATOM 13 C1' U B 51 -14.648 60.626 5.455 1.00 30.48 C
ATOM 14 N1 U B 51 -13.910 59.700 4.519 1.00 31.25 N
ATOM 15 C2 U B 51 -12.767 60.144 3.863 1.00 31.37 C
ATOM 16 O2 U B 51 -12.287 61.260 3.999 1.00 31.56 O
ATOM 17 N3 U B 51 -12.184 59.215 3.028 1.00 31.15 N
ATOM 18 C4 U B 51 -12.621 57.922 2.779 1.00 31.07 C
ATOM 19 O4 U B 51 -12.000 57.206 2.002 1.00 30.95 O
ATOM 20 C5 U B 51 -13.815 57.530 3.488 1.00 31.27 C
ATOM 21 C6 U B 51 -14.400 58.415 4.309 1.00 31.45 C
ATOM 22 P C B 52 -16.974 63.717 6.958 1.00 27.81 P
ATOM 23 OP1 C B 52 -17.652 64.893 6.367 1.00 27.25 O
ATOM 24 OP2 C B 52 -15.493 63.639 6.937 1.00 27.89 O
ATOM 25 O5' C B 52 -17.472 63.571 8.473 1.00 27.00 O
TER

Atoms:
OP1: (-20.078,52.432,4.313)
OP2: (-18.033,52.433,2.783)
C3': (-16.868,55.276,7.288)
C1': (-14.928,53.996,7.704)
C5': (-18.281,53.239,6.531)
O4': (-15.996,53.103,7.424)
C8: (-14.369,53.817,5.212)
O2': (-15.788,55.424,9.481)
C6: (-11.059,54.980,4.881)
C5: (-12.372,54.540,5.167)
C4: (-12.764,54.593,6.501)
P: (-18.623,52.228,4.124)
C4': (-17.259,53.818,7.503)
C2': (-15.570,55.337,8.085)
C2: (-10.807,55.410,7.156)
N1: (-10.288,55.414,5.916)
N3: (-12.025,55.025,7.546)
N6: (-10.537,54.981,3.646)
N7: (-13.395,54.044,4.362)
N9: (-14.058,54.119,6.524)
O5': (-17.822,53.146,5.170)
O3': (-17.866,56.177,7.769)
C4: (-12.621,57.922,2.779)
N3: (-12.184,59.215,3.028)
OP1: (-19.760,57.796,7.326)
OP2: (-18.666,56.483,5.425)
C2: (-12.767,60.144,3.863)
C1': (-14.648,60.626,5.455)
C3': (-16.980,61.144,5.913)
O5': (-17.406,58.312,6.558)
O4': (-15.022,59.946,6.640)
C5': (-17.088,59.212,7.621)
P: (-18.544,57.192,6.721)
C4': (-16.318,60.410,7.094)
C2': (-15.916,61.177,4.801)
O2': (-15.656,62.460,4.264)
N1: (-13.910,59.700,4.519)
O4: (-12.000,57.206,2.002)
O2: (-12.287,61.260,3.999)
C6: (-14.400,58.415,4.309)
C5: (-13.815,57.530,3.488)
O3': (-17.618,62.429,6.235)
Image (generated by PyMOL):
PyMOL image
show in jmol