Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X32:X33
Extra
PDB:
ATOM 1 O3' A A 31 -6.290 -2.865 20.998 1.00 53.56 O
ATOM 2 P G A 32 -6.071 -3.146 19.437 1.00 53.64 P
ATOM 3 OP1 G A 32 -6.780 -2.069 18.711 1.00 53.88 O
ATOM 4 OP2 G A 32 -6.404 -4.561 19.162 1.00 53.62 O
ATOM 5 O5' G A 32 -4.502 -2.936 19.212 1.00 53.25 O
ATOM 6 C5' G A 32 -3.900 -1.652 19.380 1.00 52.99 C
ATOM 7 C4' G A 32 -2.390 -1.769 19.424 1.00 52.42 C
ATOM 8 O4' G A 32 -1.992 -2.553 20.576 1.00 52.64 O
ATOM 9 C3' G A 32 -1.783 -2.499 18.238 1.00 51.98 C
ATOM 10 O3' G A 32 -1.592 -1.597 17.159 1.00 51.97 O
ATOM 11 C2' G A 32 -0.476 -3.037 18.813 1.00 52.23 C
ATOM 12 O2' G A 32 0.570 -2.084 18.825 1.00 52.10 O
ATOM 13 C1' G A 32 -0.888 -3.386 20.242 1.00 52.38 C
ATOM 14 N9 G A 32 -1.269 -4.788 20.438 1.00 52.31 N
ATOM 15 C8 G A 32 -2.535 -5.310 20.311 1.00 52.14 C
ATOM 16 N7 G A 32 -2.601 -6.586 20.550 1.00 52.17 N
ATOM 17 C5 G A 32 -1.299 -6.943 20.856 1.00 51.94 C
ATOM 18 C6 G A 32 -0.767 -8.209 21.199 1.00 52.47 C
ATOM 19 O6 G A 32 -1.381 -9.281 21.298 1.00 52.33 O
ATOM 20 N1 G A 32 0.612 -8.160 21.445 1.00 52.49 N
ATOM 21 C2 G A 32 1.379 -7.018 21.356 1.00 52.26 C
ATOM 22 N2 G A 32 2.687 -7.162 21.619 1.00 51.92 N
ATOM 23 N3 G A 32 0.883 -5.822 21.031 1.00 52.23 N
ATOM 24 C4 G A 32 -0.459 -5.851 20.796 1.00 52.19 C
ATOM 25 P U A 33 -2.403 -1.781 15.787 1.00 51.78 P
ATOM 26 OP1 U A 33 -2.438 -0.468 15.108 1.00 52.54 O
ATOM 27 OP2 U A 33 -3.658 -2.521 16.033 1.00 52.05 O
ATOM 28 O5' U A 33 -1.447 -2.748 14.960 1.00 51.31 O
TER
ATOM 1 O3' G B 32 -1.592 -1.597 17.159 1.00 51.97 O
ATOM 2 P U B 33 -2.403 -1.781 15.787 1.00 51.78 P
ATOM 3 OP1 U B 33 -2.438 -0.468 15.108 1.00 52.54 O
ATOM 4 OP2 U B 33 -3.658 -2.521 16.033 1.00 52.05 O
ATOM 5 O5' U B 33 -1.447 -2.748 14.960 1.00 51.31 O
ATOM 6 C5' U B 33 -0.197 -2.320 14.450 1.00 50.40 C
ATOM 7 C4' U B 33 0.445 -3.500 13.749 1.00 49.83 C
ATOM 8 O4' U B 33 0.561 -4.605 14.684 1.00 48.97 O
ATOM 9 C3' U B 33 -0.345 -4.026 12.553 1.00 49.85 C
ATOM 10 O3' U B 33 0.532 -4.216 11.433 1.00 50.21 O
ATOM 11 C2' U B 33 -0.966 -5.327 13.069 1.00 49.26 C
ATOM 12 O2' U B 33 -1.168 -6.306 12.069 1.00 48.45 O
ATOM 13 C1' U B 33 0.109 -5.782 14.053 1.00 48.46 C
ATOM 14 N1 U B 33 -0.375 -6.775 15.067 1.00 48.24 N
ATOM 15 C2 U B 33 0.253 -8.006 15.158 1.00 47.55 C
ATOM 16 O2 U B 33 1.198 -8.339 14.465 1.00 47.14 O
ATOM 17 N3 U B 33 -0.272 -8.850 16.106 1.00 47.21 N
ATOM 18 C4 U B 33 -1.333 -8.598 16.954 1.00 47.42 C
ATOM 19 O4 U B 33 -1.684 -9.453 17.760 1.00 47.77 O
ATOM 20 C5 U B 33 -1.932 -7.295 16.804 1.00 47.86 C
ATOM 21 C6 U B 33 -1.444 -6.451 15.885 1.00 47.96 C
ATOM 22 P U B 34 0.497 -3.145 10.248 1.00 50.17 P
ATOM 23 OP1 U B 34 1.540 -3.501 9.265 1.00 50.91 O
ATOM 24 OP2 U B 34 0.507 -1.799 10.859 1.00 51.41 O
ATOM 25 O5' U B 34 -0.939 -3.401 9.584 1.00 49.73 O
TER
ATOM 2 P G A 32 -6.071 -3.146 19.437 1.00 53.64 P
ATOM 3 OP1 G A 32 -6.780 -2.069 18.711 1.00 53.88 O
ATOM 4 OP2 G A 32 -6.404 -4.561 19.162 1.00 53.62 O
ATOM 5 O5' G A 32 -4.502 -2.936 19.212 1.00 53.25 O
ATOM 6 C5' G A 32 -3.900 -1.652 19.380 1.00 52.99 C
ATOM 7 C4' G A 32 -2.390 -1.769 19.424 1.00 52.42 C
ATOM 8 O4' G A 32 -1.992 -2.553 20.576 1.00 52.64 O
ATOM 9 C3' G A 32 -1.783 -2.499 18.238 1.00 51.98 C
ATOM 10 O3' G A 32 -1.592 -1.597 17.159 1.00 51.97 O
ATOM 11 C2' G A 32 -0.476 -3.037 18.813 1.00 52.23 C
ATOM 12 O2' G A 32 0.570 -2.084 18.825 1.00 52.10 O
ATOM 13 C1' G A 32 -0.888 -3.386 20.242 1.00 52.38 C
ATOM 14 N9 G A 32 -1.269 -4.788 20.438 1.00 52.31 N
ATOM 15 C8 G A 32 -2.535 -5.310 20.311 1.00 52.14 C
ATOM 16 N7 G A 32 -2.601 -6.586 20.550 1.00 52.17 N
ATOM 17 C5 G A 32 -1.299 -6.943 20.856 1.00 51.94 C
ATOM 18 C6 G A 32 -0.767 -8.209 21.199 1.00 52.47 C
ATOM 19 O6 G A 32 -1.381 -9.281 21.298 1.00 52.33 O
ATOM 20 N1 G A 32 0.612 -8.160 21.445 1.00 52.49 N
ATOM 21 C2 G A 32 1.379 -7.018 21.356 1.00 52.26 C
ATOM 22 N2 G A 32 2.687 -7.162 21.619 1.00 51.92 N
ATOM 23 N3 G A 32 0.883 -5.822 21.031 1.00 52.23 N
ATOM 24 C4 G A 32 -0.459 -5.851 20.796 1.00 52.19 C
ATOM 25 P U A 33 -2.403 -1.781 15.787 1.00 51.78 P
ATOM 26 OP1 U A 33 -2.438 -0.468 15.108 1.00 52.54 O
ATOM 27 OP2 U A 33 -3.658 -2.521 16.033 1.00 52.05 O
ATOM 28 O5' U A 33 -1.447 -2.748 14.960 1.00 51.31 O
TER
ATOM 1 O3' G B 32 -1.592 -1.597 17.159 1.00 51.97 O
ATOM 2 P U B 33 -2.403 -1.781 15.787 1.00 51.78 P
ATOM 3 OP1 U B 33 -2.438 -0.468 15.108 1.00 52.54 O
ATOM 4 OP2 U B 33 -3.658 -2.521 16.033 1.00 52.05 O
ATOM 5 O5' U B 33 -1.447 -2.748 14.960 1.00 51.31 O
ATOM 6 C5' U B 33 -0.197 -2.320 14.450 1.00 50.40 C
ATOM 7 C4' U B 33 0.445 -3.500 13.749 1.00 49.83 C
ATOM 8 O4' U B 33 0.561 -4.605 14.684 1.00 48.97 O
ATOM 9 C3' U B 33 -0.345 -4.026 12.553 1.00 49.85 C
ATOM 10 O3' U B 33 0.532 -4.216 11.433 1.00 50.21 O
ATOM 11 C2' U B 33 -0.966 -5.327 13.069 1.00 49.26 C
ATOM 12 O2' U B 33 -1.168 -6.306 12.069 1.00 48.45 O
ATOM 13 C1' U B 33 0.109 -5.782 14.053 1.00 48.46 C
ATOM 14 N1 U B 33 -0.375 -6.775 15.067 1.00 48.24 N
ATOM 15 C2 U B 33 0.253 -8.006 15.158 1.00 47.55 C
ATOM 16 O2 U B 33 1.198 -8.339 14.465 1.00 47.14 O
ATOM 17 N3 U B 33 -0.272 -8.850 16.106 1.00 47.21 N
ATOM 18 C4 U B 33 -1.333 -8.598 16.954 1.00 47.42 C
ATOM 19 O4 U B 33 -1.684 -9.453 17.760 1.00 47.77 O
ATOM 20 C5 U B 33 -1.932 -7.295 16.804 1.00 47.86 C
ATOM 21 C6 U B 33 -1.444 -6.451 15.885 1.00 47.96 C
ATOM 22 P U B 34 0.497 -3.145 10.248 1.00 50.17 P
ATOM 23 OP1 U B 34 1.540 -3.501 9.265 1.00 50.91 O
ATOM 24 OP2 U B 34 0.507 -1.799 10.859 1.00 51.41 O
ATOM 25 O5' U B 34 -0.939 -3.401 9.584 1.00 49.73 O
TER
Atoms:
OP1: (-6.780,-2.069,18.711)
OP2: (-6.404,-4.561,19.162)
C3': (-1.783,-2.499,18.238)
C1': (-0.888,-3.386,20.242)
C5': (-3.900,-1.652,19.380)
O6: (-1.381,-9.281,21.298)
O4': (-1.992,-2.553,20.576)
C8: (-2.535,-5.310,20.311)
C2: (1.379,-7.018,21.356)
C6: (-0.767,-8.209,21.199)
C5: (-1.299,-6.943,20.856)
C4: (-0.459,-5.851,20.796)
P: (-6.071,-3.146,19.437)
C4': (-2.390,-1.769,19.424)
C2': (-0.476,-3.037,18.813)
O2': (0.570,-2.084,18.825)
N1: (0.612,-8.160,21.445)
N2: (2.687,-7.162,21.619)
N3: (0.883,-5.822,21.031)
N7: (-2.601,-6.586,20.550)
N9: (-1.269,-4.788,20.438)
O5': (-4.502,-2.936,19.212)
O3': (-1.592,-1.597,17.159)
OP2: (-6.404,-4.561,19.162)
C3': (-1.783,-2.499,18.238)
C1': (-0.888,-3.386,20.242)
C5': (-3.900,-1.652,19.380)
O6: (-1.381,-9.281,21.298)
O4': (-1.992,-2.553,20.576)
C8: (-2.535,-5.310,20.311)
C2: (1.379,-7.018,21.356)
C6: (-0.767,-8.209,21.199)
C5: (-1.299,-6.943,20.856)
C4: (-0.459,-5.851,20.796)
P: (-6.071,-3.146,19.437)
C4': (-2.390,-1.769,19.424)
C2': (-0.476,-3.037,18.813)
O2': (0.570,-2.084,18.825)
N1: (0.612,-8.160,21.445)
N2: (2.687,-7.162,21.619)
N3: (0.883,-5.822,21.031)
N7: (-2.601,-6.586,20.550)
N9: (-1.269,-4.788,20.438)
O5': (-4.502,-2.936,19.212)
O3': (-1.592,-1.597,17.159)
C4: (-1.333,-8.598,16.954)
N3: (-0.272,-8.850,16.106)
OP1: (-2.438,-0.468,15.108)
OP2: (-3.658,-2.521,16.033)
C2: (0.253,-8.006,15.158)
C1': (0.109,-5.782,14.053)
C3': (-0.345,-4.026,12.553)
O5': (-1.447,-2.748,14.960)
O4': (0.561,-4.605,14.684)
C5': (-0.197,-2.320,14.450)
P: (-2.403,-1.781,15.787)
C4': (0.445,-3.500,13.749)
C2': (-0.966,-5.327,13.069)
O2': (-1.168,-6.306,12.069)
N1: (-0.375,-6.775,15.067)
O4: (-1.684,-9.453,17.760)
O2: (1.198,-8.339,14.465)
C6: (-1.444,-6.451,15.885)
C5: (-1.932,-7.295,16.804)
O3': (0.532,-4.216,11.433)
N3: (-0.272,-8.850,16.106)
OP1: (-2.438,-0.468,15.108)
OP2: (-3.658,-2.521,16.033)
C2: (0.253,-8.006,15.158)
C1': (0.109,-5.782,14.053)
C3': (-0.345,-4.026,12.553)
O5': (-1.447,-2.748,14.960)
O4': (0.561,-4.605,14.684)
C5': (-0.197,-2.320,14.450)
P: (-2.403,-1.781,15.787)
C4': (0.445,-3.500,13.749)
C2': (-0.966,-5.327,13.069)
O2': (-1.168,-6.306,12.069)
N1: (-0.375,-6.775,15.067)
O4: (-1.684,-9.453,17.760)
O2: (1.198,-8.339,14.465)
C6: (-1.444,-6.451,15.885)
C5: (-1.932,-7.295,16.804)
O3': (0.532,-4.216,11.433)
Image (generated by PyMOL):