Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1972:A1779
Extra
PDB:
ATOM 1 O3' U A1971 -11.181 109.592 134.773 1.00 3.51 O
ATOM 2 P G A1972 -11.928 108.772 135.925 1.00 2.95 P
ATOM 3 OP1 G A1972 -10.905 108.516 136.998 1.00 2.95 O
ATOM 4 OP2 G A1972 -12.597 107.601 135.270 1.00 2.95 O
ATOM 5 O5' G A1972 -13.030 109.819 136.429 1.00 2.95 O
ATOM 6 C5' G A1972 -12.732 111.205 136.524 1.00 2.95 C
ATOM 7 C4' G A1972 -13.842 111.959 137.201 1.00 2.95 C
ATOM 8 O4' G A1972 -14.940 112.102 136.271 1.00 2.95 O
ATOM 9 C3' G A1972 -14.424 111.274 138.436 1.00 2.95 C
ATOM 10 O3' G A1972 -14.906 112.250 139.349 1.00 2.95 O
ATOM 11 C2' G A1972 -15.600 110.507 137.877 1.00 2.95 C
ATOM 12 O2' G A1972 -16.611 110.243 138.822 1.00 2.95 O
ATOM 13 C1' G A1972 -16.091 111.457 136.792 1.00 2.95 C
ATOM 14 N9 G A1972 -16.764 110.787 135.699 1.00 2.80 N
ATOM 15 C8 G A1972 -16.311 109.701 135.016 1.00 2.80 C
ATOM 16 N7 G A1972 -17.132 109.335 134.077 1.00 2.80 N
ATOM 17 C5 G A1972 -18.177 110.243 134.166 1.00 2.80 C
ATOM 18 C6 G A1972 -19.354 110.344 133.404 1.00 2.80 C
ATOM 19 O6 G A1972 -19.728 109.623 132.483 1.00 2.80 O
ATOM 20 N1 G A1972 -20.122 111.405 133.826 1.00 2.80 N
ATOM 21 C2 G A1972 -19.796 112.247 134.846 1.00 2.80 C
ATOM 22 N2 G A1972 -20.679 113.204 135.100 1.00 2.80 N
ATOM 23 N3 G A1972 -18.709 112.180 135.581 1.00 2.80 N
ATOM 24 C4 G A1972 -17.957 111.148 135.171 1.00 2.80 C
ATOM 25 P A A1973 -14.030 112.653 140.616 1.00 3.08 P
ATOM 26 OP1 A A1973 -14.166 114.128 140.786 1.00 3.08 O
ATOM 27 OP2 A A1973 -12.674 112.086 140.405 1.00 3.08 O
ATOM 28 O5' A A1973 -14.756 111.879 141.811 1.00 3.08 O
TER
ATOM 1 O3' A B1778 -21.214 116.471 138.536 1.00 2.73 O
ATOM 2 P A B1779 -20.778 116.926 137.089 1.00 0.01 P
ATOM 3 OP1 A B1779 -19.960 115.832 136.529 1.00 0.01 O
ATOM 4 OP2 A B1779 -20.183 118.258 137.213 1.00 0.01 O
ATOM 5 O5' A B1779 -22.171 117.018 136.341 1.00 0.01 O
ATOM 6 C5' A B1779 -22.231 117.374 134.979 1.00 0.01 C
ATOM 7 C4' A B1779 -23.556 117.979 134.609 1.00 0.01 C
ATOM 8 O4' A B1779 -24.637 117.065 134.950 1.00 0.01 O
ATOM 9 C3' A B1779 -23.909 119.303 135.280 1.00 0.01 C
ATOM 10 O3' A B1779 -24.491 120.148 134.310 1.00 0.01 O
ATOM 11 C2' A B1779 -24.990 118.885 136.274 1.00 0.01 C
ATOM 12 O2' A B1779 -25.875 119.913 136.676 1.00 0.01 O
ATOM 13 C1' A B1779 -25.684 117.835 135.452 1.00 0.01 C
ATOM 14 N9 A B1779 -26.673 117.005 136.163 1.00 0.41 N
ATOM 15 C8 A B1779 -27.132 117.205 137.430 1.00 0.41 C
ATOM 16 N7 A B1779 -28.111 116.390 137.775 1.00 0.41 N
ATOM 17 C5 A B1779 -28.379 115.615 136.672 1.00 0.41 C
ATOM 18 C6 A B1779 -29.310 114.561 136.431 1.00 0.41 C
ATOM 19 N6 A B1779 -30.209 114.058 137.285 1.00 0.41 N
ATOM 20 N1 A B1779 -29.298 113.986 135.220 1.00 0.41 N
ATOM 21 C2 A B1779 -28.410 114.468 134.333 1.00 0.41 C
ATOM 22 N3 A B1779 -27.495 115.448 134.452 1.00 0.41 N
ATOM 23 C4 A B1779 -27.511 116.008 135.666 1.00 0.41 C
ATOM 24 P A B1780 -23.736 121.472 133.838 1.00 1.22 P
ATOM 25 OP1 A B1780 -24.437 121.991 132.628 1.00 1.22 O
ATOM 26 OP2 A B1780 -22.292 121.135 133.748 1.00 1.22 O
ATOM 27 O5' A B1780 -23.980 122.446 135.054 1.00 1.22 O
TER
ATOM 2 P G A1972 -11.928 108.772 135.925 1.00 2.95 P
ATOM 3 OP1 G A1972 -10.905 108.516 136.998 1.00 2.95 O
ATOM 4 OP2 G A1972 -12.597 107.601 135.270 1.00 2.95 O
ATOM 5 O5' G A1972 -13.030 109.819 136.429 1.00 2.95 O
ATOM 6 C5' G A1972 -12.732 111.205 136.524 1.00 2.95 C
ATOM 7 C4' G A1972 -13.842 111.959 137.201 1.00 2.95 C
ATOM 8 O4' G A1972 -14.940 112.102 136.271 1.00 2.95 O
ATOM 9 C3' G A1972 -14.424 111.274 138.436 1.00 2.95 C
ATOM 10 O3' G A1972 -14.906 112.250 139.349 1.00 2.95 O
ATOM 11 C2' G A1972 -15.600 110.507 137.877 1.00 2.95 C
ATOM 12 O2' G A1972 -16.611 110.243 138.822 1.00 2.95 O
ATOM 13 C1' G A1972 -16.091 111.457 136.792 1.00 2.95 C
ATOM 14 N9 G A1972 -16.764 110.787 135.699 1.00 2.80 N
ATOM 15 C8 G A1972 -16.311 109.701 135.016 1.00 2.80 C
ATOM 16 N7 G A1972 -17.132 109.335 134.077 1.00 2.80 N
ATOM 17 C5 G A1972 -18.177 110.243 134.166 1.00 2.80 C
ATOM 18 C6 G A1972 -19.354 110.344 133.404 1.00 2.80 C
ATOM 19 O6 G A1972 -19.728 109.623 132.483 1.00 2.80 O
ATOM 20 N1 G A1972 -20.122 111.405 133.826 1.00 2.80 N
ATOM 21 C2 G A1972 -19.796 112.247 134.846 1.00 2.80 C
ATOM 22 N2 G A1972 -20.679 113.204 135.100 1.00 2.80 N
ATOM 23 N3 G A1972 -18.709 112.180 135.581 1.00 2.80 N
ATOM 24 C4 G A1972 -17.957 111.148 135.171 1.00 2.80 C
ATOM 25 P A A1973 -14.030 112.653 140.616 1.00 3.08 P
ATOM 26 OP1 A A1973 -14.166 114.128 140.786 1.00 3.08 O
ATOM 27 OP2 A A1973 -12.674 112.086 140.405 1.00 3.08 O
ATOM 28 O5' A A1973 -14.756 111.879 141.811 1.00 3.08 O
TER
ATOM 1 O3' A B1778 -21.214 116.471 138.536 1.00 2.73 O
ATOM 2 P A B1779 -20.778 116.926 137.089 1.00 0.01 P
ATOM 3 OP1 A B1779 -19.960 115.832 136.529 1.00 0.01 O
ATOM 4 OP2 A B1779 -20.183 118.258 137.213 1.00 0.01 O
ATOM 5 O5' A B1779 -22.171 117.018 136.341 1.00 0.01 O
ATOM 6 C5' A B1779 -22.231 117.374 134.979 1.00 0.01 C
ATOM 7 C4' A B1779 -23.556 117.979 134.609 1.00 0.01 C
ATOM 8 O4' A B1779 -24.637 117.065 134.950 1.00 0.01 O
ATOM 9 C3' A B1779 -23.909 119.303 135.280 1.00 0.01 C
ATOM 10 O3' A B1779 -24.491 120.148 134.310 1.00 0.01 O
ATOM 11 C2' A B1779 -24.990 118.885 136.274 1.00 0.01 C
ATOM 12 O2' A B1779 -25.875 119.913 136.676 1.00 0.01 O
ATOM 13 C1' A B1779 -25.684 117.835 135.452 1.00 0.01 C
ATOM 14 N9 A B1779 -26.673 117.005 136.163 1.00 0.41 N
ATOM 15 C8 A B1779 -27.132 117.205 137.430 1.00 0.41 C
ATOM 16 N7 A B1779 -28.111 116.390 137.775 1.00 0.41 N
ATOM 17 C5 A B1779 -28.379 115.615 136.672 1.00 0.41 C
ATOM 18 C6 A B1779 -29.310 114.561 136.431 1.00 0.41 C
ATOM 19 N6 A B1779 -30.209 114.058 137.285 1.00 0.41 N
ATOM 20 N1 A B1779 -29.298 113.986 135.220 1.00 0.41 N
ATOM 21 C2 A B1779 -28.410 114.468 134.333 1.00 0.41 C
ATOM 22 N3 A B1779 -27.495 115.448 134.452 1.00 0.41 N
ATOM 23 C4 A B1779 -27.511 116.008 135.666 1.00 0.41 C
ATOM 24 P A B1780 -23.736 121.472 133.838 1.00 1.22 P
ATOM 25 OP1 A B1780 -24.437 121.991 132.628 1.00 1.22 O
ATOM 26 OP2 A B1780 -22.292 121.135 133.748 1.00 1.22 O
ATOM 27 O5' A B1780 -23.980 122.446 135.054 1.00 1.22 O
TER
Atoms:
OP1: (-10.905,108.516,136.998)
OP2: (-12.597,107.601,135.270)
C3': (-14.424,111.274,138.436)
C1': (-16.091,111.457,136.792)
C5': (-12.732,111.205,136.524)
O6: (-19.728,109.623,132.483)
O4': (-14.940,112.102,136.271)
C8: (-16.311,109.701,135.016)
C2: (-19.796,112.247,134.846)
C6: (-19.354,110.344,133.404)
C5: (-18.177,110.243,134.166)
C4: (-17.957,111.148,135.171)
P: (-11.928,108.772,135.925)
C4': (-13.842,111.959,137.201)
C2': (-15.600,110.507,137.877)
O2': (-16.611,110.243,138.822)
N1: (-20.122,111.405,133.826)
N2: (-20.679,113.204,135.100)
N3: (-18.709,112.180,135.581)
N7: (-17.132,109.335,134.077)
N9: (-16.764,110.787,135.699)
O5': (-13.030,109.819,136.429)
O3': (-14.906,112.250,139.349)
OP2: (-12.597,107.601,135.270)
C3': (-14.424,111.274,138.436)
C1': (-16.091,111.457,136.792)
C5': (-12.732,111.205,136.524)
O6: (-19.728,109.623,132.483)
O4': (-14.940,112.102,136.271)
C8: (-16.311,109.701,135.016)
C2: (-19.796,112.247,134.846)
C6: (-19.354,110.344,133.404)
C5: (-18.177,110.243,134.166)
C4: (-17.957,111.148,135.171)
P: (-11.928,108.772,135.925)
C4': (-13.842,111.959,137.201)
C2': (-15.600,110.507,137.877)
O2': (-16.611,110.243,138.822)
N1: (-20.122,111.405,133.826)
N2: (-20.679,113.204,135.100)
N3: (-18.709,112.180,135.581)
N7: (-17.132,109.335,134.077)
N9: (-16.764,110.787,135.699)
O5': (-13.030,109.819,136.429)
O3': (-14.906,112.250,139.349)
OP1: (-19.960,115.832,136.529)
OP2: (-20.183,118.258,137.213)
C3': (-23.909,119.303,135.280)
C1': (-25.684,117.835,135.452)
C5': (-22.231,117.374,134.979)
O4': (-24.637,117.065,134.950)
C8: (-27.132,117.205,137.430)
O2': (-25.875,119.913,136.676)
C6: (-29.310,114.561,136.431)
C5: (-28.379,115.615,136.672)
C4: (-27.511,116.008,135.666)
P: (-20.778,116.926,137.089)
C4': (-23.556,117.979,134.609)
C2': (-24.990,118.885,136.274)
C2: (-28.410,114.468,134.333)
N1: (-29.298,113.986,135.220)
N3: (-27.495,115.448,134.452)
N6: (-30.209,114.058,137.285)
N7: (-28.111,116.390,137.775)
N9: (-26.673,117.005,136.163)
O5': (-22.171,117.018,136.341)
O3': (-24.491,120.148,134.310)
OP2: (-20.183,118.258,137.213)
C3': (-23.909,119.303,135.280)
C1': (-25.684,117.835,135.452)
C5': (-22.231,117.374,134.979)
O4': (-24.637,117.065,134.950)
C8: (-27.132,117.205,137.430)
O2': (-25.875,119.913,136.676)
C6: (-29.310,114.561,136.431)
C5: (-28.379,115.615,136.672)
C4: (-27.511,116.008,135.666)
P: (-20.778,116.926,137.089)
C4': (-23.556,117.979,134.609)
C2': (-24.990,118.885,136.274)
C2: (-28.410,114.468,134.333)
N1: (-29.298,113.986,135.220)
N3: (-27.495,115.448,134.452)
N6: (-30.209,114.058,137.285)
N7: (-28.111,116.390,137.775)
N9: (-26.673,117.005,136.163)
O5': (-22.171,117.018,136.341)
O3': (-24.491,120.148,134.310)
Image (generated by PyMOL):