ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIL:A50:A51

Extra

PDB:
ATOM 1 O3' A A 49 -18.834 50.957 4.809 1.00 21.23 O
ATOM 2 P A A 50 -19.266 52.449 4.421 1.00 21.29 P
ATOM 3 OP1 A A 50 -20.727 52.565 4.638 1.00 21.32 O
ATOM 4 OP2 A A 50 -18.700 52.774 3.092 1.00 21.01 O
ATOM 5 O5' A A 50 -18.492 53.338 5.506 1.00 21.15 O
ATOM 6 C5' A A 50 -18.828 53.280 6.892 1.00 21.01 C
ATOM 7 C4' A A 50 -17.816 54.047 7.724 1.00 20.93 C
ATOM 8 O4' A A 50 -16.505 53.437 7.603 1.00 20.49 O
ATOM 9 C3' A A 50 -17.599 55.491 7.296 1.00 21.23 C
ATOM 10 O3' A A 50 -18.618 56.334 7.836 1.00 22.36 O
ATOM 11 C2' A A 50 -16.211 55.777 7.865 1.00 20.65 C
ATOM 12 O2' A A 50 -16.233 56.113 9.240 1.00 20.72 O
ATOM 13 C1' A A 50 -15.501 54.439 7.645 1.00 19.98 C
ATOM 14 N9 A A 50 -14.719 54.401 6.405 1.00 19.41 N
ATOM 15 C8 A A 50 -15.158 54.025 5.164 1.00 19.21 C
ATOM 16 N7 A A 50 -14.244 54.092 4.226 1.00 18.87 N
ATOM 17 C5 A A 50 -13.121 54.549 4.893 1.00 18.80 C
ATOM 18 C6 A A 50 -11.806 54.837 4.460 1.00 18.71 C
ATOM 19 N6 A A 50 -11.405 54.691 3.193 1.00 18.74 N
ATOM 20 N1 A A 50 -10.914 55.276 5.381 1.00 18.52 N
ATOM 21 C2 A A 50 -11.319 55.420 6.653 1.00 18.55 C
ATOM 22 N3 A A 50 -12.526 55.182 7.173 1.00 18.66 N
ATOM 23 C4 A A 50 -13.394 54.746 6.238 1.00 18.97 C
ATOM 24 P U A 51 -19.328 57.436 6.917 1.00 23.58 P
ATOM 25 OP1 U A 51 -20.360 58.107 7.740 1.00 23.55 O
ATOM 26 OP2 U A 51 -19.724 56.808 5.635 1.00 23.47 O
ATOM 27 O5' U A 51 -18.135 58.458 6.607 1.00 24.00 O
TER

ATOM 1 O3' A B 50 -18.618 56.334 7.836 1.00 22.36 O
ATOM 2 P U B 51 -19.328 57.436 6.917 1.00 23.58 P
ATOM 3 OP1 U B 51 -20.360 58.107 7.740 1.00 23.55 O
ATOM 4 OP2 U B 51 -19.724 56.808 5.635 1.00 23.47 O
ATOM 5 O5' U B 51 -18.135 58.458 6.607 1.00 24.00 O
ATOM 6 C5' U B 51 -17.818 59.508 7.517 1.00 24.94 C
ATOM 7 C4' U B 51 -16.915 60.538 6.866 1.00 25.59 C
ATOM 8 O4' U B 51 -15.720 59.871 6.395 1.00 25.56 O
ATOM 9 C3' U B 51 -17.516 61.272 5.659 1.00 25.93 C
ATOM 10 O3' U B 51 -17.982 62.624 5.938 1.00 26.70 O
ATOM 11 C2' U B 51 -16.452 61.193 4.553 1.00 25.84 C
ATOM 12 O2' U B 51 -16.048 62.456 4.056 1.00 25.99 O
ATOM 13 C1' U B 51 -15.266 60.480 5.202 1.00 25.66 C
ATOM 14 N1 U B 51 -14.646 59.436 4.311 1.00 25.45 N
ATOM 15 C2 U B 51 -13.440 59.703 3.682 1.00 25.27 C
ATOM 16 O2 U B 51 -12.826 60.748 3.805 1.00 25.13 O
ATOM 17 N3 U B 51 -12.963 58.686 2.886 1.00 25.34 N
ATOM 18 C4 U B 51 -13.557 57.456 2.657 1.00 25.40 C
ATOM 19 O4 U B 51 -13.008 56.646 1.918 1.00 25.55 O
ATOM 20 C5 U B 51 -14.810 57.249 3.342 1.00 25.39 C
ATOM 21 C6 U B 51 -15.295 58.223 4.124 1.00 25.50 C
ATOM 22 P C B 52 -17.240 63.739 6.830 1.00 27.04 P
ATOM 23 OP1 C B 52 -17.683 65.055 6.321 1.00 26.87 O
ATOM 24 OP2 C B 52 -15.790 63.441 6.917 1.00 26.82 O
ATOM 25 O5' C B 52 -17.918 63.535 8.264 1.00 26.66 O
TER

Atoms:
OP1: (-20.727,52.565,4.638)
OP2: (-18.700,52.774,3.092)
C3': (-17.599,55.491,7.296)
C1': (-15.501,54.439,7.645)
C5': (-18.828,53.280,6.892)
O4': (-16.505,53.437,7.603)
C8: (-15.158,54.025,5.164)
O2': (-16.233,56.113,9.240)
C6: (-11.806,54.837,4.460)
C5: (-13.121,54.549,4.893)
C4: (-13.394,54.746,6.238)
P: (-19.266,52.449,4.421)
C4': (-17.816,54.047,7.724)
C2': (-16.211,55.777,7.865)
C2: (-11.319,55.420,6.653)
N1: (-10.914,55.276,5.381)
N3: (-12.526,55.182,7.173)
N6: (-11.405,54.691,3.193)
N7: (-14.244,54.092,4.226)
N9: (-14.719,54.401,6.405)
O5': (-18.492,53.338,5.506)
O3': (-18.618,56.334,7.836)
C4: (-13.557,57.456,2.657)
N3: (-12.963,58.686,2.886)
OP1: (-20.360,58.107,7.740)
OP2: (-19.724,56.808,5.635)
C2: (-13.440,59.703,3.682)
C1': (-15.266,60.480,5.202)
C3': (-17.516,61.272,5.659)
O5': (-18.135,58.458,6.607)
O4': (-15.720,59.871,6.395)
C5': (-17.818,59.508,7.517)
P: (-19.328,57.436,6.917)
C4': (-16.915,60.538,6.866)
C2': (-16.452,61.193,4.553)
O2': (-16.048,62.456,4.056)
N1: (-14.646,59.436,4.311)
O4: (-13.008,56.646,1.918)
O2: (-12.826,60.748,3.805)
C6: (-15.295,58.223,4.124)
C5: (-14.810,57.249,3.342)
O3': (-17.982,62.624,5.938)
Image (generated by PyMOL):
PyMOL image
show in jmol