ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIM:A50:A51

Extra

PDB:
ATOM 1 O3' A A 49 -18.402 50.946 4.669 1.00 29.12 O
ATOM 2 P A A 50 -18.815 52.390 4.129 1.00 29.55 P
ATOM 3 OP1 A A 50 -20.279 52.542 4.273 1.00 29.55 O
ATOM 4 OP2 A A 50 -18.194 52.577 2.802 1.00 29.62 O
ATOM 5 O5' A A 50 -18.075 53.376 5.151 1.00 30.71 O
ATOM 6 C5' A A 50 -18.466 53.404 6.528 1.00 31.77 C
ATOM 7 C4' A A 50 -17.374 53.915 7.461 1.00 32.12 C
ATOM 8 O4' A A 50 -16.130 53.177 7.296 1.00 31.45 O
ATOM 9 C3' A A 50 -16.965 55.371 7.281 1.00 32.09 C
ATOM 10 O3' A A 50 -17.946 56.262 7.813 1.00 32.64 O
ATOM 11 C2' A A 50 -15.631 55.370 8.030 1.00 31.85 C
ATOM 12 O2' A A 50 -15.754 55.365 9.440 1.00 32.36 O
ATOM 13 C1' A A 50 -15.039 54.041 7.562 1.00 30.93 C
ATOM 14 N9 A A 50 -14.233 54.190 6.353 1.00 30.61 N
ATOM 15 C8 A A 50 -14.629 53.974 5.058 1.00 30.88 C
ATOM 16 N7 A A 50 -13.693 54.198 4.164 1.00 30.95 N
ATOM 17 C5 A A 50 -12.602 54.591 4.926 1.00 30.50 C
ATOM 18 C6 A A 50 -11.286 54.976 4.582 1.00 29.95 C
ATOM 19 N6 A A 50 -10.838 55.014 3.323 1.00 29.75 N
ATOM 20 N1 A A 50 -10.443 55.313 5.585 1.00 29.85 N
ATOM 21 C2 A A 50 -10.887 55.269 6.850 1.00 29.71 C
ATOM 22 N3 A A 50 -12.099 54.924 7.293 1.00 29.93 N
ATOM 23 C4 A A 50 -12.918 54.595 6.277 1.00 30.35 C
ATOM 24 P U A 51 -18.635 57.338 6.838 1.00 34.23 P
ATOM 25 OP1 U A 51 -19.663 58.096 7.592 1.00 33.98 O
ATOM 26 OP2 U A 51 -19.043 56.652 5.593 1.00 34.13 O
ATOM 27 O5' U A 51 -17.407 58.310 6.506 1.00 34.47 O
TER

ATOM 1 O3' A B 50 -17.946 56.262 7.813 1.00 32.64 O
ATOM 2 P U B 51 -18.635 57.338 6.838 1.00 34.23 P
ATOM 3 OP1 U B 51 -19.663 58.096 7.592 1.00 33.98 O
ATOM 4 OP2 U B 51 -19.043 56.652 5.593 1.00 34.13 O
ATOM 5 O5' U B 51 -17.407 58.310 6.506 1.00 34.47 O
ATOM 6 C5' U B 51 -16.921 59.197 7.517 1.00 35.04 C
ATOM 7 C4' U B 51 -16.360 60.486 6.941 1.00 35.14 C
ATOM 8 O4' U B 51 -15.055 60.205 6.382 1.00 35.62 O
ATOM 9 C3' U B 51 -17.194 61.165 5.841 1.00 35.17 C
ATOM 10 O3' U B 51 -17.720 62.493 6.182 1.00 34.69 O
ATOM 11 C2' U B 51 -16.332 61.076 4.571 1.00 35.44 C
ATOM 12 O2' U B 51 -16.286 62.266 3.809 1.00 36.38 O
ATOM 13 C1' U B 51 -14.934 60.730 5.077 1.00 35.75 C
ATOM 14 N1 U B 51 -14.218 59.717 4.227 1.00 36.23 N
ATOM 15 C2 U B 51 -13.035 60.070 3.594 1.00 36.33 C
ATOM 16 O2 U B 51 -12.521 61.173 3.679 1.00 36.56 O
ATOM 17 N3 U B 51 -12.463 59.066 2.842 1.00 36.04 N
ATOM 18 C4 U B 51 -12.942 57.777 2.662 1.00 35.65 C
ATOM 19 O4 U B 51 -12.321 56.995 1.955 1.00 35.31 O
ATOM 20 C5 U B 51 -14.175 57.479 3.349 1.00 35.89 C
ATOM 21 C6 U B 51 -14.749 58.440 4.089 1.00 36.25 C
ATOM 22 P C B 52 -16.924 63.774 6.750 1.00 34.15 P
ATOM 23 OP1 C B 52 -17.405 64.938 5.974 1.00 33.84 O
ATOM 24 OP2 C B 52 -15.467 63.504 6.812 1.00 34.49 O
ATOM 25 O5' C B 52 -17.495 63.913 8.241 1.00 33.48 O
TER

Atoms:
OP1: (-20.279,52.542,4.273)
OP2: (-18.194,52.577,2.802)
C3': (-16.965,55.371,7.281)
C1': (-15.039,54.041,7.562)
C5': (-18.466,53.404,6.528)
O4': (-16.130,53.177,7.296)
C8: (-14.629,53.974,5.058)
O2': (-15.754,55.365,9.440)
C6: (-11.286,54.976,4.582)
C5: (-12.602,54.591,4.926)
C4: (-12.918,54.595,6.277)
P: (-18.815,52.390,4.129)
C4': (-17.374,53.915,7.461)
C2': (-15.631,55.370,8.030)
C2: (-10.887,55.269,6.850)
N1: (-10.443,55.313,5.585)
N3: (-12.099,54.924,7.293)
N6: (-10.838,55.014,3.323)
N7: (-13.693,54.198,4.164)
N9: (-14.233,54.190,6.353)
O5': (-18.075,53.376,5.151)
O3': (-17.946,56.262,7.813)
C4: (-12.942,57.777,2.662)
N3: (-12.463,59.066,2.842)
OP1: (-19.663,58.096,7.592)
OP2: (-19.043,56.652,5.593)
C2: (-13.035,60.070,3.594)
C1': (-14.934,60.730,5.077)
C3': (-17.194,61.165,5.841)
O5': (-17.407,58.310,6.506)
O4': (-15.055,60.205,6.382)
C5': (-16.921,59.197,7.517)
P: (-18.635,57.338,6.838)
C4': (-16.360,60.486,6.941)
C2': (-16.332,61.076,4.571)
O2': (-16.286,62.266,3.809)
N1: (-14.218,59.717,4.227)
O4: (-12.321,56.995,1.955)
O2: (-12.521,61.173,3.679)
C6: (-14.749,58.440,4.089)
C5: (-14.175,57.479,3.349)
O3': (-17.720,62.493,6.182)
Image (generated by PyMOL):
PyMOL image
show in jmol