ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A547:A548

Extra

PDB:
ATOM 1 O3' G A 546 158.672 110.110 -22.227 1.00 54.72 O
ATOM 2 P C A 547 158.960 110.842 -23.632 1.00 54.85 P
ATOM 3 OP1 C A 547 159.955 111.927 -23.402 1.00 51.62 O
ATOM 4 OP2 C A 547 157.646 111.163 -24.272 1.00 51.96 O
ATOM 5 O5' C A 547 159.671 109.704 -24.496 1.00 56.02 O
ATOM 6 C5' C A 547 161.068 109.383 -24.333 1.00 55.03 C
ATOM 7 C4' C A 547 161.479 108.353 -25.356 1.00 55.11 C
ATOM 8 O4' C A 547 160.703 107.146 -25.162 1.00 55.70 O
ATOM 9 C3' C A 547 161.220 108.746 -26.799 1.00 55.70 C
ATOM 10 O3' C A 547 162.312 109.480 -27.304 1.00 57.66 O
ATOM 11 C2' C A 547 161.077 107.400 -27.499 1.00 55.91 C
ATOM 12 O2' C A 547 162.311 106.808 -27.852 1.00 55.25 O
ATOM 13 C1' C A 547 160.421 106.551 -26.413 1.00 56.36 C
ATOM 14 N1 C A 547 158.961 106.435 -26.568 1.00 58.35 N
ATOM 15 C2 C A 547 158.452 105.573 -27.564 1.00 60.08 C
ATOM 16 O2 C A 547 159.247 104.945 -28.283 1.00 61.63 O
ATOM 17 N3 C A 547 157.109 105.452 -27.716 1.00 59.75 N
ATOM 18 C4 C A 547 156.286 106.149 -26.931 1.00 58.53 C
ATOM 19 N4 C A 547 154.980 106.006 -27.124 1.00 54.91 N
ATOM 20 C5 C A 547 156.774 107.031 -25.912 1.00 58.11 C
ATOM 21 C6 C A 547 158.104 107.143 -25.769 1.00 57.71 C
ATOM 22 P G A 548 162.072 110.918 -27.965 1.00 57.90 P
ATOM 23 OP1 G A 548 161.810 111.846 -26.830 1.00 56.93 O
ATOM 24 OP2 G A 548 161.077 110.747 -29.064 1.00 58.67 O
ATOM 25 O5' G A 548 163.492 111.295 -28.595 1.00 57.86 O
TER

ATOM 1 O3' C B 547 162.312 109.480 -27.304 1.00 57.66 O
ATOM 2 P G B 548 162.072 110.918 -27.965 1.00 57.90 P
ATOM 3 OP1 G B 548 161.810 111.846 -26.830 1.00 56.93 O
ATOM 4 OP2 G B 548 161.077 110.747 -29.064 1.00 58.67 O
ATOM 5 O5' G B 548 163.492 111.295 -28.595 1.00 57.86 O
ATOM 6 C5' G B 548 163.933 110.751 -29.867 1.00 56.24 C
ATOM 7 C4' G B 548 165.264 111.358 -30.254 1.00 56.83 C
ATOM 8 O4' G B 548 165.093 112.788 -30.405 1.00 57.21 O
ATOM 9 C3' G B 548 166.363 111.167 -29.214 1.00 56.68 C
ATOM 10 O3' G B 548 167.123 110.012 -29.551 1.00 55.80 O
ATOM 11 C2' G B 548 167.211 112.425 -29.356 1.00 57.97 C
ATOM 12 O2' G B 548 168.215 112.289 -30.343 1.00 59.28 O
ATOM 13 C1' G B 548 166.180 113.470 -29.806 1.00 58.91 C
ATOM 14 N9 G B 548 165.638 114.349 -28.765 1.00 61.47 N
ATOM 15 C8 G B 548 164.307 114.572 -28.509 1.00 62.46 C
ATOM 16 N7 G B 548 164.103 115.434 -27.551 1.00 64.58 N
ATOM 17 C5 G B 548 165.375 115.799 -27.135 1.00 62.76 C
ATOM 18 C6 G B 548 165.784 116.716 -26.131 1.00 61.92 C
ATOM 19 O6 G B 548 165.085 117.396 -25.374 1.00 62.24 O
ATOM 20 N1 G B 548 167.162 116.802 -26.053 1.00 61.13 N
ATOM 21 C2 G B 548 168.035 116.093 -26.822 1.00 61.67 C
ATOM 22 N2 G B 548 169.327 116.313 -26.580 1.00 64.26 N
ATOM 23 N3 G B 548 167.675 115.231 -27.757 1.00 62.60 N
ATOM 24 C4 G B 548 166.337 115.137 -27.865 1.00 61.96 C
ATOM 25 P U B 549 167.624 109.010 -28.405 1.00 56.04 P
ATOM 26 OP1 U B 549 168.209 107.812 -29.061 1.00 54.65 O
ATOM 27 OP2 U B 549 166.522 108.846 -27.431 1.00 56.89 O
ATOM 28 O5' U B 549 168.797 109.800 -27.704 1.00 57.79 O
TER

Atoms:
C2: (158.452,105.573,-27.564)
OP1: (159.955,111.927,-23.402)
OP2: (157.646,111.163,-24.272)
C4: (156.286,106.149,-26.931)
O5': (159.671,109.704,-24.496)
C3': (161.220,108.746,-26.799)
C1': (160.421,106.551,-26.413)
O4': (160.703,107.146,-25.162)
C5': (161.068,109.383,-24.333)
P: (158.960,110.842,-23.632)
O2: (159.247,104.945,-28.283)
C4': (161.479,108.353,-25.356)
C2': (161.077,107.400,-27.499)
O2': (162.311,106.808,-27.852)
N1: (158.961,106.435,-26.568)
N3: (157.109,105.452,-27.716)
N4: (154.980,106.006,-27.124)
C6: (158.104,107.143,-25.769)
C5: (156.774,107.031,-25.912)
O3': (162.312,109.480,-27.304)
OP1: (161.810,111.846,-26.830)
OP2: (161.077,110.747,-29.064)
C3': (166.363,111.167,-29.214)
C1': (166.180,113.470,-29.806)
C5': (163.933,110.751,-29.867)
O6: (165.085,117.396,-25.374)
O4': (165.093,112.788,-30.405)
C8: (164.307,114.572,-28.509)
C2: (168.035,116.093,-26.822)
C6: (165.784,116.716,-26.131)
C5: (165.375,115.799,-27.135)
C4: (166.337,115.137,-27.865)
P: (162.072,110.918,-27.965)
C4': (165.264,111.358,-30.254)
C2': (167.211,112.425,-29.356)
O2': (168.215,112.289,-30.343)
N1: (167.162,116.802,-26.053)
N2: (169.327,116.313,-26.580)
N3: (167.675,115.231,-27.757)
N7: (164.103,115.434,-27.551)
N9: (165.638,114.349,-28.765)
O5': (163.492,111.295,-28.595)
O3': (167.123,110.012,-29.551)
Image (generated by PyMOL):
PyMOL image
show in jmol