Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11496:11497
Extra
PDB:
ATOM 1 O3' C A1495 23.153 -8.872 123.990 1.00 53.47 O
ATOM 2 P G A1496 22.854 -7.363 124.391 1.00 73.71 P
ATOM 3 OP1 G A1496 21.606 -6.972 123.741 1.00 73.36 O
ATOM 4 OP2 G A1496 24.067 -6.588 124.094 1.00 73.89 O
ATOM 5 O5' G A1496 22.643 -7.469 125.957 1.00 74.28 O
ATOM 6 C5' G A1496 21.725 -8.395 126.495 1.00 74.22 C
ATOM 7 C4' G A1496 21.930 -8.560 127.971 1.00 74.79 C
ATOM 8 O4' G A1496 23.196 -9.214 128.215 1.00 74.96 O
ATOM 9 C3' G A1496 22.002 -7.273 128.776 1.00 75.32 C
ATOM 10 O3' G A1496 20.721 -6.781 129.110 1.00 75.36 O
ATOM 11 C2' G A1496 22.809 -7.677 129.995 1.00 75.85 C
ATOM 12 O2' G A1496 21.957 -8.248 130.965 1.00 76.02 O
ATOM 13 C1' G A1496 23.734 -8.777 129.440 1.00 75.58 C
ATOM 14 N9 G A1496 25.132 -8.302 129.221 1.00 75.76 N
ATOM 15 C8 G A1496 25.611 -7.564 128.147 1.00 75.52 C
ATOM 16 N7 G A1496 26.883 -7.276 128.227 1.00 75.78 N
ATOM 17 C5 G A1496 27.272 -7.848 129.426 1.00 76.21 C
ATOM 18 C6 G A1496 28.536 -7.848 130.026 1.00 76.63 C
ATOM 19 O6 G A1496 29.546 -7.320 129.565 1.00 76.67 O
ATOM 20 N1 G A1496 28.567 -8.509 131.242 1.00 77.01 N
ATOM 21 C2 G A1496 27.485 -9.121 131.823 1.00 76.99 C
ATOM 22 N2 G A1496 27.695 -9.731 133.019 1.00 77.40 N
ATOM 23 N3 G A1496 26.274 -9.135 131.256 1.00 76.59 N
ATOM 24 C4 G A1496 26.232 -8.479 130.063 1.00 76.22 C
ATOM 25 P U A1497 20.451 -5.204 129.200 1.00 69.16 P
ATOM 26 OP1 U A1497 19.011 -5.027 129.482 1.00 69.10 O
ATOM 27 OP2 U A1497 21.024 -4.590 127.988 1.00 68.86 O
ATOM 28 O5' U A1497 21.287 -4.763 130.471 1.00 69.84 O
TER
ATOM 1 O3' G B1496 20.721 -6.781 129.110 1.00 75.36 O
ATOM 2 P U B1497 20.451 -5.204 129.200 1.00 69.16 P
ATOM 3 OP1 U B1497 19.011 -5.027 129.482 1.00 69.10 O
ATOM 4 OP2 U B1497 21.024 -4.590 127.988 1.00 68.86 O
ATOM 5 O5' U B1497 21.287 -4.763 130.471 1.00 69.84 O
ATOM 6 C5' U B1497 20.856 -5.132 131.783 1.00 70.24 C
ATOM 7 C4' U B1497 21.529 -4.311 132.854 1.00 70.88 C
ATOM 8 O4' U B1497 22.970 -4.569 132.833 1.00 71.03 O
ATOM 9 C3' U B1497 21.354 -2.794 132.727 1.00 71.06 C
ATOM 10 O3' U B1497 21.205 -2.231 134.035 1.00 71.65 O
ATOM 11 C2' U B1497 22.698 -2.356 132.126 1.00 71.08 C
ATOM 12 O2' U B1497 23.059 -0.994 132.362 1.00 71.45 O
ATOM 13 C1' U B1497 23.659 -3.341 132.804 1.00 71.32 C
ATOM 14 N1 U B1497 24.936 -3.518 132.094 1.00 71.19 N
ATOM 15 C2 U B1497 26.117 -3.224 132.750 1.00 71.66 C
ATOM 16 O2 U B1497 26.176 -2.889 133.918 1.00 72.19 O
ATOM 17 N3 U B1497 27.259 -3.354 131.986 1.00 71.50 N
ATOM 18 C4 U B1497 27.356 -3.725 130.650 1.00 70.92 C
ATOM 19 O4 U B1497 28.456 -3.820 130.070 1.00 70.83 O
ATOM 20 C5 U B1497 26.070 -3.978 130.073 1.00 70.47 C
ATOM 21 C6 U B1497 24.941 -3.870 130.784 1.00 70.61 C
ATOM 22 P U B1498 19.913 -1.366 134.427 1.00121.81 P
ATOM 23 OP1 U B1498 19.062 -1.277 133.226 1.00121.23 O
ATOM 24 OP2 U B1498 20.394 -0.105 135.060 1.00122.33 O
ATOM 25 O5' U B1498 19.223 -2.292 135.513 1.00121.99 O
TER
ATOM 2 P G A1496 22.854 -7.363 124.391 1.00 73.71 P
ATOM 3 OP1 G A1496 21.606 -6.972 123.741 1.00 73.36 O
ATOM 4 OP2 G A1496 24.067 -6.588 124.094 1.00 73.89 O
ATOM 5 O5' G A1496 22.643 -7.469 125.957 1.00 74.28 O
ATOM 6 C5' G A1496 21.725 -8.395 126.495 1.00 74.22 C
ATOM 7 C4' G A1496 21.930 -8.560 127.971 1.00 74.79 C
ATOM 8 O4' G A1496 23.196 -9.214 128.215 1.00 74.96 O
ATOM 9 C3' G A1496 22.002 -7.273 128.776 1.00 75.32 C
ATOM 10 O3' G A1496 20.721 -6.781 129.110 1.00 75.36 O
ATOM 11 C2' G A1496 22.809 -7.677 129.995 1.00 75.85 C
ATOM 12 O2' G A1496 21.957 -8.248 130.965 1.00 76.02 O
ATOM 13 C1' G A1496 23.734 -8.777 129.440 1.00 75.58 C
ATOM 14 N9 G A1496 25.132 -8.302 129.221 1.00 75.76 N
ATOM 15 C8 G A1496 25.611 -7.564 128.147 1.00 75.52 C
ATOM 16 N7 G A1496 26.883 -7.276 128.227 1.00 75.78 N
ATOM 17 C5 G A1496 27.272 -7.848 129.426 1.00 76.21 C
ATOM 18 C6 G A1496 28.536 -7.848 130.026 1.00 76.63 C
ATOM 19 O6 G A1496 29.546 -7.320 129.565 1.00 76.67 O
ATOM 20 N1 G A1496 28.567 -8.509 131.242 1.00 77.01 N
ATOM 21 C2 G A1496 27.485 -9.121 131.823 1.00 76.99 C
ATOM 22 N2 G A1496 27.695 -9.731 133.019 1.00 77.40 N
ATOM 23 N3 G A1496 26.274 -9.135 131.256 1.00 76.59 N
ATOM 24 C4 G A1496 26.232 -8.479 130.063 1.00 76.22 C
ATOM 25 P U A1497 20.451 -5.204 129.200 1.00 69.16 P
ATOM 26 OP1 U A1497 19.011 -5.027 129.482 1.00 69.10 O
ATOM 27 OP2 U A1497 21.024 -4.590 127.988 1.00 68.86 O
ATOM 28 O5' U A1497 21.287 -4.763 130.471 1.00 69.84 O
TER
ATOM 1 O3' G B1496 20.721 -6.781 129.110 1.00 75.36 O
ATOM 2 P U B1497 20.451 -5.204 129.200 1.00 69.16 P
ATOM 3 OP1 U B1497 19.011 -5.027 129.482 1.00 69.10 O
ATOM 4 OP2 U B1497 21.024 -4.590 127.988 1.00 68.86 O
ATOM 5 O5' U B1497 21.287 -4.763 130.471 1.00 69.84 O
ATOM 6 C5' U B1497 20.856 -5.132 131.783 1.00 70.24 C
ATOM 7 C4' U B1497 21.529 -4.311 132.854 1.00 70.88 C
ATOM 8 O4' U B1497 22.970 -4.569 132.833 1.00 71.03 O
ATOM 9 C3' U B1497 21.354 -2.794 132.727 1.00 71.06 C
ATOM 10 O3' U B1497 21.205 -2.231 134.035 1.00 71.65 O
ATOM 11 C2' U B1497 22.698 -2.356 132.126 1.00 71.08 C
ATOM 12 O2' U B1497 23.059 -0.994 132.362 1.00 71.45 O
ATOM 13 C1' U B1497 23.659 -3.341 132.804 1.00 71.32 C
ATOM 14 N1 U B1497 24.936 -3.518 132.094 1.00 71.19 N
ATOM 15 C2 U B1497 26.117 -3.224 132.750 1.00 71.66 C
ATOM 16 O2 U B1497 26.176 -2.889 133.918 1.00 72.19 O
ATOM 17 N3 U B1497 27.259 -3.354 131.986 1.00 71.50 N
ATOM 18 C4 U B1497 27.356 -3.725 130.650 1.00 70.92 C
ATOM 19 O4 U B1497 28.456 -3.820 130.070 1.00 70.83 O
ATOM 20 C5 U B1497 26.070 -3.978 130.073 1.00 70.47 C
ATOM 21 C6 U B1497 24.941 -3.870 130.784 1.00 70.61 C
ATOM 22 P U B1498 19.913 -1.366 134.427 1.00121.81 P
ATOM 23 OP1 U B1498 19.062 -1.277 133.226 1.00121.23 O
ATOM 24 OP2 U B1498 20.394 -0.105 135.060 1.00122.33 O
ATOM 25 O5' U B1498 19.223 -2.292 135.513 1.00121.99 O
TER
Atoms:
OP1: (21.606,-6.972,123.741)
OP2: (24.067,-6.588,124.094)
C3': (22.002,-7.273,128.776)
C1': (23.734,-8.777,129.440)
C5': (21.725,-8.395,126.495)
O6: (29.546,-7.320,129.565)
O4': (23.196,-9.214,128.215)
C8: (25.611,-7.564,128.147)
C2: (27.485,-9.121,131.823)
C6: (28.536,-7.848,130.026)
C5: (27.272,-7.848,129.426)
C4: (26.232,-8.479,130.063)
P: (22.854,-7.363,124.391)
C4': (21.930,-8.560,127.971)
C2': (22.809,-7.677,129.995)
O2': (21.957,-8.248,130.965)
N1: (28.567,-8.509,131.242)
N2: (27.695,-9.731,133.019)
N3: (26.274,-9.135,131.256)
N7: (26.883,-7.276,128.227)
N9: (25.132,-8.302,129.221)
O5': (22.643,-7.469,125.957)
O3': (20.721,-6.781,129.110)
OP2: (24.067,-6.588,124.094)
C3': (22.002,-7.273,128.776)
C1': (23.734,-8.777,129.440)
C5': (21.725,-8.395,126.495)
O6: (29.546,-7.320,129.565)
O4': (23.196,-9.214,128.215)
C8: (25.611,-7.564,128.147)
C2: (27.485,-9.121,131.823)
C6: (28.536,-7.848,130.026)
C5: (27.272,-7.848,129.426)
C4: (26.232,-8.479,130.063)
P: (22.854,-7.363,124.391)
C4': (21.930,-8.560,127.971)
C2': (22.809,-7.677,129.995)
O2': (21.957,-8.248,130.965)
N1: (28.567,-8.509,131.242)
N2: (27.695,-9.731,133.019)
N3: (26.274,-9.135,131.256)
N7: (26.883,-7.276,128.227)
N9: (25.132,-8.302,129.221)
O5': (22.643,-7.469,125.957)
O3': (20.721,-6.781,129.110)
C4: (27.356,-3.725,130.650)
N3: (27.259,-3.354,131.986)
OP1: (19.011,-5.027,129.482)
OP2: (21.024,-4.590,127.988)
C2: (26.117,-3.224,132.750)
C1': (23.659,-3.341,132.804)
C3': (21.354,-2.794,132.727)
O5': (21.287,-4.763,130.471)
O4': (22.970,-4.569,132.833)
C5': (20.856,-5.132,131.783)
P: (20.451,-5.204,129.200)
C4': (21.529,-4.311,132.854)
C2': (22.698,-2.356,132.126)
O2': (23.059,-0.994,132.362)
N1: (24.936,-3.518,132.094)
O4: (28.456,-3.820,130.070)
O2: (26.176,-2.889,133.918)
C6: (24.941,-3.870,130.784)
C5: (26.070,-3.978,130.073)
O3': (21.205,-2.231,134.035)
N3: (27.259,-3.354,131.986)
OP1: (19.011,-5.027,129.482)
OP2: (21.024,-4.590,127.988)
C2: (26.117,-3.224,132.750)
C1': (23.659,-3.341,132.804)
C3': (21.354,-2.794,132.727)
O5': (21.287,-4.763,130.471)
O4': (22.970,-4.569,132.833)
C5': (20.856,-5.132,131.783)
P: (20.451,-5.204,129.200)
C4': (21.529,-4.311,132.854)
C2': (22.698,-2.356,132.126)
O2': (23.059,-0.994,132.362)
N1: (24.936,-3.518,132.094)
O4: (28.456,-3.820,130.070)
O2: (26.176,-2.889,133.918)
C6: (24.941,-3.870,130.784)
C5: (26.070,-3.978,130.073)
O3': (21.205,-2.231,134.035)
Image (generated by PyMOL):