Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11117:11118
Extra
PDB:
ATOM 1 O3' G A1116 56.425 2.726 20.805 1.00 34.76 O
ATOM 2 P U A1117 55.961 3.457 19.469 1.00 35.02 P
ATOM 3 OP1 U A1117 55.024 4.550 19.871 1.00 34.96 O
ATOM 4 OP2 U A1117 55.507 2.391 18.551 1.00 35.21 O
ATOM 5 O5' U A1117 57.316 4.093 18.915 1.00 35.25 O
ATOM 6 C5' U A1117 58.254 4.702 19.788 1.00 35.07 C
ATOM 7 C4' U A1117 59.531 4.976 19.068 1.00 35.33 C
ATOM 8 O4' U A1117 60.281 3.757 18.993 1.00 35.31 O
ATOM 9 C3' U A1117 59.391 5.387 17.623 1.00 35.76 C
ATOM 10 O3' U A1117 59.108 6.768 17.457 1.00 35.89 O
ATOM 11 C2' U A1117 60.717 4.964 17.024 1.00 35.95 C
ATOM 12 O2' U A1117 61.714 5.897 17.324 1.00 35.97 O
ATOM 13 C1' U A1117 61.019 3.715 17.809 1.00 35.67 C
ATOM 14 N1 U A1117 60.659 2.511 17.097 1.00 35.80 N
ATOM 15 C2 U A1117 61.545 2.147 16.099 1.00 36.11 C
ATOM 16 O2 U A1117 62.516 2.805 15.804 1.00 36.27 O
ATOM 17 N3 U A1117 61.243 1.007 15.451 1.00 36.24 N
ATOM 18 C4 U A1117 60.193 0.234 15.782 1.00 36.07 C
ATOM 19 O4 U A1117 60.060 -0.757 15.142 1.00 36.23 O
ATOM 20 C5 U A1117 59.364 0.651 16.836 1.00 35.74 C
ATOM 21 C6 U A1117 59.593 1.771 17.475 1.00 35.61 C
ATOM 22 P G A1118 57.875 7.230 16.509 1.00 38.21 P
ATOM 23 OP1 G A1118 56.625 6.962 17.321 1.00 37.92 O
ATOM 24 OP2 G A1118 58.059 6.572 15.195 1.00 38.55 O
ATOM 25 O5' G A1118 58.092 8.801 16.329 1.00 38.39 O
TER
ATOM 1 O3' U B1117 59.108 6.768 17.457 1.00 35.89 O
ATOM 2 P G B1118 57.875 7.230 16.509 1.00 38.21 P
ATOM 3 OP1 G B1118 56.625 6.962 17.321 1.00 37.92 O
ATOM 4 OP2 G B1118 58.059 6.572 15.195 1.00 38.55 O
ATOM 5 O5' G B1118 58.092 8.801 16.329 1.00 38.39 O
ATOM 6 C5' G B1118 58.527 9.345 15.084 1.00 38.83 C
ATOM 7 C4' G B1118 58.313 10.828 15.043 1.00 38.97 C
ATOM 8 O4' G B1118 56.906 11.096 14.892 1.00 39.01 O
ATOM 9 C3' G B1118 58.744 11.574 16.294 1.00 38.69 C
ATOM 10 O3' G B1118 60.050 12.062 16.158 1.00 38.82 O
ATOM 11 C2' G B1118 57.703 12.687 16.452 1.00 38.74 C
ATOM 12 O2' G B1118 58.106 13.873 15.783 1.00 39.08 O
ATOM 13 C1' G B1118 56.491 12.120 15.734 1.00 38.86 C
ATOM 14 N9 G B1118 55.490 11.560 16.638 1.00 38.52 N
ATOM 15 C8 G B1118 55.067 10.262 16.531 1.00 38.41 C
ATOM 16 N7 G B1118 54.095 9.966 17.334 1.00 38.13 N
ATOM 17 C5 G B1118 53.872 11.168 17.991 1.00 38.06 C
ATOM 18 C6 G B1118 52.934 11.451 18.992 1.00 37.81 C
ATOM 19 O6 G B1118 52.148 10.632 19.466 1.00 37.58 O
ATOM 20 N1 G B1118 53.008 12.781 19.435 1.00 37.83 N
ATOM 21 C2 G B1118 53.881 13.712 18.942 1.00 38.08 C
ATOM 22 N2 G B1118 53.789 14.928 19.462 1.00 38.09 N
ATOM 23 N3 G B1118 54.759 13.464 17.989 1.00 38.33 N
ATOM 24 C4 G B1118 54.709 12.175 17.576 1.00 38.30 C
ATOM 25 P C B1119 61.095 12.049 17.362 1.00 36.50 P
ATOM 26 OP1 C B1119 62.255 12.740 16.859 1.00 36.77 O
ATOM 27 OP2 C B1119 61.249 10.653 17.818 1.00 36.24 O
ATOM 28 O5' C B1119 60.392 12.946 18.464 1.00 36.27 O
TER
ATOM 2 P U A1117 55.961 3.457 19.469 1.00 35.02 P
ATOM 3 OP1 U A1117 55.024 4.550 19.871 1.00 34.96 O
ATOM 4 OP2 U A1117 55.507 2.391 18.551 1.00 35.21 O
ATOM 5 O5' U A1117 57.316 4.093 18.915 1.00 35.25 O
ATOM 6 C5' U A1117 58.254 4.702 19.788 1.00 35.07 C
ATOM 7 C4' U A1117 59.531 4.976 19.068 1.00 35.33 C
ATOM 8 O4' U A1117 60.281 3.757 18.993 1.00 35.31 O
ATOM 9 C3' U A1117 59.391 5.387 17.623 1.00 35.76 C
ATOM 10 O3' U A1117 59.108 6.768 17.457 1.00 35.89 O
ATOM 11 C2' U A1117 60.717 4.964 17.024 1.00 35.95 C
ATOM 12 O2' U A1117 61.714 5.897 17.324 1.00 35.97 O
ATOM 13 C1' U A1117 61.019 3.715 17.809 1.00 35.67 C
ATOM 14 N1 U A1117 60.659 2.511 17.097 1.00 35.80 N
ATOM 15 C2 U A1117 61.545 2.147 16.099 1.00 36.11 C
ATOM 16 O2 U A1117 62.516 2.805 15.804 1.00 36.27 O
ATOM 17 N3 U A1117 61.243 1.007 15.451 1.00 36.24 N
ATOM 18 C4 U A1117 60.193 0.234 15.782 1.00 36.07 C
ATOM 19 O4 U A1117 60.060 -0.757 15.142 1.00 36.23 O
ATOM 20 C5 U A1117 59.364 0.651 16.836 1.00 35.74 C
ATOM 21 C6 U A1117 59.593 1.771 17.475 1.00 35.61 C
ATOM 22 P G A1118 57.875 7.230 16.509 1.00 38.21 P
ATOM 23 OP1 G A1118 56.625 6.962 17.321 1.00 37.92 O
ATOM 24 OP2 G A1118 58.059 6.572 15.195 1.00 38.55 O
ATOM 25 O5' G A1118 58.092 8.801 16.329 1.00 38.39 O
TER
ATOM 1 O3' U B1117 59.108 6.768 17.457 1.00 35.89 O
ATOM 2 P G B1118 57.875 7.230 16.509 1.00 38.21 P
ATOM 3 OP1 G B1118 56.625 6.962 17.321 1.00 37.92 O
ATOM 4 OP2 G B1118 58.059 6.572 15.195 1.00 38.55 O
ATOM 5 O5' G B1118 58.092 8.801 16.329 1.00 38.39 O
ATOM 6 C5' G B1118 58.527 9.345 15.084 1.00 38.83 C
ATOM 7 C4' G B1118 58.313 10.828 15.043 1.00 38.97 C
ATOM 8 O4' G B1118 56.906 11.096 14.892 1.00 39.01 O
ATOM 9 C3' G B1118 58.744 11.574 16.294 1.00 38.69 C
ATOM 10 O3' G B1118 60.050 12.062 16.158 1.00 38.82 O
ATOM 11 C2' G B1118 57.703 12.687 16.452 1.00 38.74 C
ATOM 12 O2' G B1118 58.106 13.873 15.783 1.00 39.08 O
ATOM 13 C1' G B1118 56.491 12.120 15.734 1.00 38.86 C
ATOM 14 N9 G B1118 55.490 11.560 16.638 1.00 38.52 N
ATOM 15 C8 G B1118 55.067 10.262 16.531 1.00 38.41 C
ATOM 16 N7 G B1118 54.095 9.966 17.334 1.00 38.13 N
ATOM 17 C5 G B1118 53.872 11.168 17.991 1.00 38.06 C
ATOM 18 C6 G B1118 52.934 11.451 18.992 1.00 37.81 C
ATOM 19 O6 G B1118 52.148 10.632 19.466 1.00 37.58 O
ATOM 20 N1 G B1118 53.008 12.781 19.435 1.00 37.83 N
ATOM 21 C2 G B1118 53.881 13.712 18.942 1.00 38.08 C
ATOM 22 N2 G B1118 53.789 14.928 19.462 1.00 38.09 N
ATOM 23 N3 G B1118 54.759 13.464 17.989 1.00 38.33 N
ATOM 24 C4 G B1118 54.709 12.175 17.576 1.00 38.30 C
ATOM 25 P C B1119 61.095 12.049 17.362 1.00 36.50 P
ATOM 26 OP1 C B1119 62.255 12.740 16.859 1.00 36.77 O
ATOM 27 OP2 C B1119 61.249 10.653 17.818 1.00 36.24 O
ATOM 28 O5' C B1119 60.392 12.946 18.464 1.00 36.27 O
TER
Atoms:
C4: (60.193,0.234,15.782)
N3: (61.243,1.007,15.451)
OP1: (55.024,4.550,19.871)
OP2: (55.507,2.391,18.551)
C2: (61.545,2.147,16.099)
C1': (61.019,3.715,17.809)
C3': (59.391,5.387,17.623)
O5': (57.316,4.093,18.915)
O4': (60.281,3.757,18.993)
C5': (58.254,4.702,19.788)
P: (55.961,3.457,19.469)
C4': (59.531,4.976,19.068)
C2': (60.717,4.964,17.024)
O2': (61.714,5.897,17.324)
N1: (60.659,2.511,17.097)
O4: (60.060,-0.757,15.142)
O2: (62.516,2.805,15.804)
C6: (59.593,1.771,17.475)
C5: (59.364,0.651,16.836)
O3': (59.108,6.768,17.457)
N3: (61.243,1.007,15.451)
OP1: (55.024,4.550,19.871)
OP2: (55.507,2.391,18.551)
C2: (61.545,2.147,16.099)
C1': (61.019,3.715,17.809)
C3': (59.391,5.387,17.623)
O5': (57.316,4.093,18.915)
O4': (60.281,3.757,18.993)
C5': (58.254,4.702,19.788)
P: (55.961,3.457,19.469)
C4': (59.531,4.976,19.068)
C2': (60.717,4.964,17.024)
O2': (61.714,5.897,17.324)
N1: (60.659,2.511,17.097)
O4: (60.060,-0.757,15.142)
O2: (62.516,2.805,15.804)
C6: (59.593,1.771,17.475)
C5: (59.364,0.651,16.836)
O3': (59.108,6.768,17.457)
OP1: (56.625,6.962,17.321)
OP2: (58.059,6.572,15.195)
C3': (58.744,11.574,16.294)
C1': (56.491,12.120,15.734)
C5': (58.527,9.345,15.084)
O6: (52.148,10.632,19.466)
O4': (56.906,11.096,14.892)
C8: (55.067,10.262,16.531)
C2: (53.881,13.712,18.942)
C6: (52.934,11.451,18.992)
C5: (53.872,11.168,17.991)
C4: (54.709,12.175,17.576)
P: (57.875,7.230,16.509)
C4': (58.313,10.828,15.043)
C2': (57.703,12.687,16.452)
O2': (58.106,13.873,15.783)
N1: (53.008,12.781,19.435)
N2: (53.789,14.928,19.462)
N3: (54.759,13.464,17.989)
N7: (54.095,9.966,17.334)
N9: (55.490,11.560,16.638)
O5': (58.092,8.801,16.329)
O3': (60.050,12.062,16.158)
OP2: (58.059,6.572,15.195)
C3': (58.744,11.574,16.294)
C1': (56.491,12.120,15.734)
C5': (58.527,9.345,15.084)
O6: (52.148,10.632,19.466)
O4': (56.906,11.096,14.892)
C8: (55.067,10.262,16.531)
C2: (53.881,13.712,18.942)
C6: (52.934,11.451,18.992)
C5: (53.872,11.168,17.991)
C4: (54.709,12.175,17.576)
P: (57.875,7.230,16.509)
C4': (58.313,10.828,15.043)
C2': (57.703,12.687,16.452)
O2': (58.106,13.873,15.783)
N1: (53.008,12.781,19.435)
N2: (53.789,14.928,19.462)
N3: (54.759,13.464,17.989)
N7: (54.095,9.966,17.334)
N9: (55.490,11.560,16.638)
O5': (58.092,8.801,16.329)
O3': (60.050,12.062,16.158)
Image (generated by PyMOL):