Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1428:A1499
Extra
PDB:
ATOM 1 O3' A A1427 8.452 -15.695 -8.566 1.00 61.31 O
ATOM 2 P G A1428 8.570 -14.166 -9.007 1.00 73.40 P
ATOM 3 OP1 G A1428 9.505 -13.518 -8.050 1.00 70.65 O
ATOM 4 OP2 G A1428 7.196 -13.640 -9.135 1.00 62.92 O
ATOM 5 O5' G A1428 9.238 -14.268 -10.454 1.00 70.68 O
ATOM 6 C5' G A1428 10.632 -14.490 -10.594 1.00 65.36 C
ATOM 7 C4' G A1428 10.954 -15.421 -11.736 1.00 53.53 C
ATOM 8 O4' G A1428 9.916 -16.427 -11.905 1.00 53.71 O
ATOM 9 C3' G A1428 11.050 -14.804 -13.107 1.00 53.93 C
ATOM 10 O3' G A1428 12.222 -14.031 -13.299 1.00 53.26 O
ATOM 11 C2' G A1428 10.980 -16.045 -13.981 1.00 63.59 C
ATOM 12 O2' G A1428 12.175 -16.784 -13.881 1.00 63.27 O
ATOM 13 C1' G A1428 9.892 -16.836 -13.267 1.00 64.65 C
ATOM 14 N9 G A1428 8.567 -16.550 -13.857 1.00 69.56 N
ATOM 15 C8 G A1428 7.488 -15.930 -13.290 1.00 71.73 C
ATOM 16 N7 G A1428 6.484 -15.800 -14.106 1.00 67.06 N
ATOM 17 C5 G A1428 6.917 -16.343 -15.300 1.00 69.29 C
ATOM 18 C6 G A1428 6.233 -16.473 -16.554 1.00 78.37 C
ATOM 19 O6 G A1428 5.072 -16.112 -16.865 1.00 74.31 O
ATOM 20 N1 G A1428 7.054 -17.098 -17.503 1.00 75.33 N
ATOM 21 C2 G A1428 8.342 -17.530 -17.277 1.00 67.01 C
ATOM 22 N2 G A1428 8.959 -18.098 -18.322 1.00 60.62 N
ATOM 23 N3 G A1428 8.966 -17.403 -16.112 1.00 66.98 N
ATOM 24 C4 G A1428 8.207 -16.806 -15.166 1.00 65.43 C
ATOM 25 P G A1429 12.233 -12.844 -14.385 1.00 63.54 P
ATOM 26 OP1 G A1429 13.050 -11.732 -13.823 1.00 75.59 O
ATOM 27 OP2 G A1429 10.823 -12.586 -14.745 1.00 84.26 O
ATOM 28 O5' G A1429 12.983 -13.488 -15.626 1.00 57.91 O
TER
ATOM 1 O3' C B1498 11.608 -20.628 -16.971 1.00 48.40 O
ATOM 2 P A B1499 12.416 -20.577 -18.339 1.00 49.53 P
ATOM 3 OP1 A B1499 11.599 -19.808 -19.298 1.00 66.16 O
ATOM 4 OP2 A B1499 12.795 -21.961 -18.680 1.00 53.38 O
ATOM 5 O5' A B1499 13.694 -19.743 -17.940 1.00 66.77 O
ATOM 6 C5' A B1499 14.529 -19.185 -18.936 1.00 71.92 C
ATOM 7 C4' A B1499 15.912 -19.744 -18.845 1.00 62.37 C
ATOM 8 O4' A B1499 16.522 -19.229 -17.643 1.00 45.72 O
ATOM 9 C3' A B1499 15.967 -21.265 -18.743 1.00 70.39 C
ATOM 10 O3' A B1499 16.853 -21.846 -19.744 1.00 79.81 O
ATOM 11 C2' A B1499 16.433 -21.537 -17.301 1.00 62.23 C
ATOM 12 O2' A B1499 17.267 -22.665 -17.150 1.00 74.82 O
ATOM 13 C1' A B1499 17.165 -20.262 -16.951 1.00 60.20 C
ATOM 14 N9 A B1499 17.166 -19.924 -15.527 1.00 71.37 N
ATOM 15 C8 A B1499 18.104 -20.263 -14.557 1.00 76.63 C
ATOM 16 N7 A B1499 17.867 -19.745 -13.360 1.00 65.95 N
ATOM 17 C5 A B1499 16.704 -19.005 -13.559 1.00 60.69 C
ATOM 18 C6 A B1499 15.935 -18.226 -12.686 1.00 53.76 C
ATOM 19 N6 A B1499 16.173 -18.020 -11.399 1.00 51.03 N
ATOM 20 N1 A B1499 14.859 -17.647 -13.219 1.00 60.68 N
ATOM 21 C2 A B1499 14.597 -17.834 -14.528 1.00 62.01 C
ATOM 22 N3 A B1499 15.229 -18.524 -15.471 1.00 50.35 N
ATOM 23 C4 A B1499 16.280 -19.099 -14.894 1.00 60.75 C
ATOM 24 P G B1500 18.453 -21.586 -19.803 1.00 57.78 P
ATOM 25 OP1 G B1500 18.954 -22.341 -20.971 1.00 96.25 O
ATOM 26 OP2 G B1500 19.013 -21.908 -18.468 1.00 88.95 O
ATOM 27 O5' G B1500 18.576 -20.023 -20.098 1.00 82.84 O
TER
ATOM 2 P G A1428 8.570 -14.166 -9.007 1.00 73.40 P
ATOM 3 OP1 G A1428 9.505 -13.518 -8.050 1.00 70.65 O
ATOM 4 OP2 G A1428 7.196 -13.640 -9.135 1.00 62.92 O
ATOM 5 O5' G A1428 9.238 -14.268 -10.454 1.00 70.68 O
ATOM 6 C5' G A1428 10.632 -14.490 -10.594 1.00 65.36 C
ATOM 7 C4' G A1428 10.954 -15.421 -11.736 1.00 53.53 C
ATOM 8 O4' G A1428 9.916 -16.427 -11.905 1.00 53.71 O
ATOM 9 C3' G A1428 11.050 -14.804 -13.107 1.00 53.93 C
ATOM 10 O3' G A1428 12.222 -14.031 -13.299 1.00 53.26 O
ATOM 11 C2' G A1428 10.980 -16.045 -13.981 1.00 63.59 C
ATOM 12 O2' G A1428 12.175 -16.784 -13.881 1.00 63.27 O
ATOM 13 C1' G A1428 9.892 -16.836 -13.267 1.00 64.65 C
ATOM 14 N9 G A1428 8.567 -16.550 -13.857 1.00 69.56 N
ATOM 15 C8 G A1428 7.488 -15.930 -13.290 1.00 71.73 C
ATOM 16 N7 G A1428 6.484 -15.800 -14.106 1.00 67.06 N
ATOM 17 C5 G A1428 6.917 -16.343 -15.300 1.00 69.29 C
ATOM 18 C6 G A1428 6.233 -16.473 -16.554 1.00 78.37 C
ATOM 19 O6 G A1428 5.072 -16.112 -16.865 1.00 74.31 O
ATOM 20 N1 G A1428 7.054 -17.098 -17.503 1.00 75.33 N
ATOM 21 C2 G A1428 8.342 -17.530 -17.277 1.00 67.01 C
ATOM 22 N2 G A1428 8.959 -18.098 -18.322 1.00 60.62 N
ATOM 23 N3 G A1428 8.966 -17.403 -16.112 1.00 66.98 N
ATOM 24 C4 G A1428 8.207 -16.806 -15.166 1.00 65.43 C
ATOM 25 P G A1429 12.233 -12.844 -14.385 1.00 63.54 P
ATOM 26 OP1 G A1429 13.050 -11.732 -13.823 1.00 75.59 O
ATOM 27 OP2 G A1429 10.823 -12.586 -14.745 1.00 84.26 O
ATOM 28 O5' G A1429 12.983 -13.488 -15.626 1.00 57.91 O
TER
ATOM 1 O3' C B1498 11.608 -20.628 -16.971 1.00 48.40 O
ATOM 2 P A B1499 12.416 -20.577 -18.339 1.00 49.53 P
ATOM 3 OP1 A B1499 11.599 -19.808 -19.298 1.00 66.16 O
ATOM 4 OP2 A B1499 12.795 -21.961 -18.680 1.00 53.38 O
ATOM 5 O5' A B1499 13.694 -19.743 -17.940 1.00 66.77 O
ATOM 6 C5' A B1499 14.529 -19.185 -18.936 1.00 71.92 C
ATOM 7 C4' A B1499 15.912 -19.744 -18.845 1.00 62.37 C
ATOM 8 O4' A B1499 16.522 -19.229 -17.643 1.00 45.72 O
ATOM 9 C3' A B1499 15.967 -21.265 -18.743 1.00 70.39 C
ATOM 10 O3' A B1499 16.853 -21.846 -19.744 1.00 79.81 O
ATOM 11 C2' A B1499 16.433 -21.537 -17.301 1.00 62.23 C
ATOM 12 O2' A B1499 17.267 -22.665 -17.150 1.00 74.82 O
ATOM 13 C1' A B1499 17.165 -20.262 -16.951 1.00 60.20 C
ATOM 14 N9 A B1499 17.166 -19.924 -15.527 1.00 71.37 N
ATOM 15 C8 A B1499 18.104 -20.263 -14.557 1.00 76.63 C
ATOM 16 N7 A B1499 17.867 -19.745 -13.360 1.00 65.95 N
ATOM 17 C5 A B1499 16.704 -19.005 -13.559 1.00 60.69 C
ATOM 18 C6 A B1499 15.935 -18.226 -12.686 1.00 53.76 C
ATOM 19 N6 A B1499 16.173 -18.020 -11.399 1.00 51.03 N
ATOM 20 N1 A B1499 14.859 -17.647 -13.219 1.00 60.68 N
ATOM 21 C2 A B1499 14.597 -17.834 -14.528 1.00 62.01 C
ATOM 22 N3 A B1499 15.229 -18.524 -15.471 1.00 50.35 N
ATOM 23 C4 A B1499 16.280 -19.099 -14.894 1.00 60.75 C
ATOM 24 P G B1500 18.453 -21.586 -19.803 1.00 57.78 P
ATOM 25 OP1 G B1500 18.954 -22.341 -20.971 1.00 96.25 O
ATOM 26 OP2 G B1500 19.013 -21.908 -18.468 1.00 88.95 O
ATOM 27 O5' G B1500 18.576 -20.023 -20.098 1.00 82.84 O
TER
Atoms:
OP1: (9.505,-13.518,-8.050)
OP2: (7.196,-13.640,-9.135)
C3': (11.050,-14.804,-13.107)
C1': (9.892,-16.836,-13.267)
C5': (10.632,-14.490,-10.594)
O6: (5.072,-16.112,-16.865)
O4': (9.916,-16.427,-11.905)
C8: (7.488,-15.930,-13.290)
C2: (8.342,-17.530,-17.277)
C6: (6.233,-16.473,-16.554)
C5: (6.917,-16.343,-15.300)
C4: (8.207,-16.806,-15.166)
P: (8.570,-14.166,-9.007)
C4': (10.954,-15.421,-11.736)
C2': (10.980,-16.045,-13.981)
O2': (12.175,-16.784,-13.881)
N1: (7.054,-17.098,-17.503)
N2: (8.959,-18.098,-18.322)
N3: (8.966,-17.403,-16.112)
N7: (6.484,-15.800,-14.106)
N9: (8.567,-16.550,-13.857)
O5': (9.238,-14.268,-10.454)
O3': (12.222,-14.031,-13.299)
OP2: (7.196,-13.640,-9.135)
C3': (11.050,-14.804,-13.107)
C1': (9.892,-16.836,-13.267)
C5': (10.632,-14.490,-10.594)
O6: (5.072,-16.112,-16.865)
O4': (9.916,-16.427,-11.905)
C8: (7.488,-15.930,-13.290)
C2: (8.342,-17.530,-17.277)
C6: (6.233,-16.473,-16.554)
C5: (6.917,-16.343,-15.300)
C4: (8.207,-16.806,-15.166)
P: (8.570,-14.166,-9.007)
C4': (10.954,-15.421,-11.736)
C2': (10.980,-16.045,-13.981)
O2': (12.175,-16.784,-13.881)
N1: (7.054,-17.098,-17.503)
N2: (8.959,-18.098,-18.322)
N3: (8.966,-17.403,-16.112)
N7: (6.484,-15.800,-14.106)
N9: (8.567,-16.550,-13.857)
O5': (9.238,-14.268,-10.454)
O3': (12.222,-14.031,-13.299)
OP1: (11.599,-19.808,-19.298)
OP2: (12.795,-21.961,-18.680)
C3': (15.967,-21.265,-18.743)
C1': (17.165,-20.262,-16.951)
C5': (14.529,-19.185,-18.936)
O4': (16.522,-19.229,-17.643)
C8: (18.104,-20.263,-14.557)
O2': (17.267,-22.665,-17.150)
C6: (15.935,-18.226,-12.686)
C5: (16.704,-19.005,-13.559)
C4: (16.280,-19.099,-14.894)
P: (12.416,-20.577,-18.339)
C4': (15.912,-19.744,-18.845)
C2': (16.433,-21.537,-17.301)
C2: (14.597,-17.834,-14.528)
N1: (14.859,-17.647,-13.219)
N3: (15.229,-18.524,-15.471)
N6: (16.173,-18.020,-11.399)
N7: (17.867,-19.745,-13.360)
N9: (17.166,-19.924,-15.527)
O5': (13.694,-19.743,-17.940)
O3': (16.853,-21.846,-19.744)
OP2: (12.795,-21.961,-18.680)
C3': (15.967,-21.265,-18.743)
C1': (17.165,-20.262,-16.951)
C5': (14.529,-19.185,-18.936)
O4': (16.522,-19.229,-17.643)
C8: (18.104,-20.263,-14.557)
O2': (17.267,-22.665,-17.150)
C6: (15.935,-18.226,-12.686)
C5: (16.704,-19.005,-13.559)
C4: (16.280,-19.099,-14.894)
P: (12.416,-20.577,-18.339)
C4': (15.912,-19.744,-18.845)
C2': (16.433,-21.537,-17.301)
C2: (14.597,-17.834,-14.528)
N1: (14.859,-17.647,-13.219)
N3: (15.229,-18.524,-15.471)
N6: (16.173,-18.020,-11.399)
N7: (17.867,-19.745,-13.360)
N9: (17.166,-19.924,-15.527)
O5': (13.694,-19.743,-17.940)
O3': (16.853,-21.846,-19.744)
Image (generated by PyMOL):