ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A342:A343

Extra

PDB:
ATOM 1 O3' G A 341 138.279 52.180 2.159 1.00 61.42 O
ATOM 2 P C A 342 138.023 53.053 3.488 1.00 47.46 P
ATOM 3 OP1 C A 342 138.932 52.522 4.556 1.00 48.07 O
ATOM 4 OP2 C A 342 136.557 53.166 3.747 1.00 48.07 O
ATOM 5 O5' C A 342 138.534 54.501 3.096 1.00 47.46 O
ATOM 6 C5' C A 342 139.612 55.119 3.809 1.00 47.46 C
ATOM 7 C4' C A 342 139.070 56.066 4.849 1.00 47.46 C
ATOM 8 O4' C A 342 138.446 55.321 5.926 1.00 47.46 O
ATOM 9 C3' C A 342 140.135 56.910 5.512 1.00 47.46 C
ATOM 10 O3' C A 342 140.289 58.094 4.782 1.00 47.46 O
ATOM 11 C2' C A 342 139.535 57.198 6.872 1.00 47.46 C
ATOM 12 O2' C A 342 138.605 58.255 6.820 1.00 47.46 O
ATOM 13 C1' C A 342 138.821 55.880 7.172 1.00 47.46 C
ATOM 14 N1 C A 342 139.745 54.938 7.829 1.00 48.07 N
ATOM 15 C2 C A 342 140.221 55.235 9.112 1.00 48.07 C
ATOM 16 O2 C A 342 139.830 56.266 9.683 1.00 48.07 O
ATOM 17 N3 C A 342 141.099 54.398 9.694 1.00 48.07 N
ATOM 18 C4 C A 342 141.509 53.305 9.048 1.00 48.07 C
ATOM 19 N4 C A 342 142.406 52.526 9.653 1.00 48.07 N
ATOM 20 C5 C A 342 141.026 52.968 7.753 1.00 48.07 C
ATOM 21 C6 C A 342 140.153 53.799 7.190 1.00 48.07 C
ATOM 22 P A A 343 141.752 58.661 4.483 1.00 44.87 P
ATOM 23 OP1 A A 343 142.207 58.017 3.224 1.00 41.96 O
ATOM 24 OP2 A A 343 142.615 58.597 5.688 1.00 41.96 O
ATOM 25 O5' A A 343 141.449 60.205 4.271 1.00 44.87 O
TER

ATOM 1 O3' C B 342 140.289 58.094 4.782 1.00 47.46 O
ATOM 2 P A B 343 141.752 58.661 4.483 1.00 44.87 P
ATOM 3 OP1 A B 343 142.207 58.017 3.224 1.00 41.96 O
ATOM 4 OP2 A B 343 142.615 58.597 5.688 1.00 41.96 O
ATOM 5 O5' A B 343 141.449 60.205 4.271 1.00 44.87 O
ATOM 6 C5' A B 343 140.934 60.679 3.049 1.00 44.87 C
ATOM 7 C4' A B 343 139.586 61.333 3.238 1.00 44.87 C
ATOM 8 O4' A B 343 139.541 62.229 2.106 1.00 44.87 O
ATOM 9 C3' A B 343 138.383 60.393 3.092 1.00 44.87 C
ATOM 10 O3' A B 343 137.532 60.388 4.239 1.00 44.87 O
ATOM 11 C2' A B 343 137.584 60.970 1.921 1.00 44.87 C
ATOM 12 O2' A B 343 136.624 61.918 2.326 1.00 44.87 O
ATOM 13 C1' A B 343 138.646 61.734 1.143 1.00 44.87 C
ATOM 14 N9 A B 343 139.386 60.947 0.148 1.00 41.96 N
ATOM 15 C8 A B 343 140.662 60.450 0.188 1.00 41.96 C
ATOM 16 N7 A B 343 140.997 59.771 -0.876 1.00 41.96 N
ATOM 17 C5 A B 343 139.866 59.831 -1.677 1.00 41.96 C
ATOM 18 C6 A B 343 139.570 59.309 -2.954 1.00 41.96 C
ATOM 19 N6 A B 343 140.433 58.601 -3.693 1.00 41.96 N
ATOM 20 N1 A B 343 138.340 59.549 -3.460 1.00 41.96 N
ATOM 21 C2 A B 343 137.484 60.270 -2.735 1.00 41.96 C
ATOM 22 N3 A B 343 137.646 60.812 -1.537 1.00 41.96 N
ATOM 23 C4 A B 343 138.871 60.552 -1.058 1.00 41.96 C
ATOM 24 P G B 344 136.333 59.298 4.359 1.00 36.66 P
ATOM 25 OP1 G B 344 136.976 58.011 4.684 1.00 39.30 O
ATOM 26 OP2 G B 344 135.407 59.371 3.191 1.00 39.30 O
ATOM 27 O5' G B 344 135.565 59.690 5.701 1.00 36.66 O
TER

Atoms:
C2: (140.221,55.235,9.112)
OP1: (138.932,52.522,4.556)
OP2: (136.557,53.166,3.747)
C4: (141.509,53.305,9.048)
O5': (138.534,54.501,3.096)
C3': (140.135,56.910,5.512)
C1': (138.821,55.880,7.172)
O4': (138.446,55.321,5.926)
C5': (139.612,55.119,3.809)
P: (138.023,53.053,3.488)
O2: (139.830,56.266,9.683)
C4': (139.070,56.066,4.849)
C2': (139.535,57.198,6.872)
O2': (138.605,58.255,6.820)
N1: (139.745,54.938,7.829)
N3: (141.099,54.398,9.694)
N4: (142.406,52.526,9.653)
C6: (140.153,53.799,7.190)
C5: (141.026,52.968,7.753)
O3': (140.289,58.094,4.782)
OP1: (142.207,58.017,3.224)
OP2: (142.615,58.597,5.688)
C3': (138.383,60.393,3.092)
C1': (138.646,61.734,1.143)
C5': (140.934,60.679,3.049)
O4': (139.541,62.229,2.106)
C8: (140.662,60.450,0.188)
O2': (136.624,61.918,2.326)
C6: (139.570,59.309,-2.954)
C5: (139.866,59.831,-1.677)
C4: (138.871,60.552,-1.058)
P: (141.752,58.661,4.483)
C4': (139.586,61.333,3.238)
C2': (137.584,60.970,1.921)
C2: (137.484,60.270,-2.735)
N1: (138.340,59.549,-3.460)
N3: (137.646,60.812,-1.537)
N6: (140.433,58.601,-3.693)
N7: (140.997,59.771,-0.876)
N9: (139.386,60.947,0.148)
O5': (141.449,60.205,4.271)
O3': (137.532,60.388,4.239)
Image (generated by PyMOL):
PyMOL image
show in jmol