ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1622:A1571

Extra

PDB:
ATOM 1 O3' G A1621 41.203 -31.818 17.536 1.00 59.56 O
ATOM 2 P G A1622 41.479 -30.333 16.955 1.00 56.30 P
ATOM 3 OP1 G A1622 42.477 -30.395 15.847 1.00 55.92 O
ATOM 4 OP2 G A1622 41.728 -29.457 18.123 1.00 56.15 O
ATOM 5 O5' G A1622 40.085 -29.906 16.301 1.00 41.54 O
ATOM 6 C5' G A1622 39.624 -30.527 15.110 1.00 44.11 C
ATOM 7 C4' G A1622 38.147 -30.785 15.196 1.00 48.70 C
ATOM 8 O4' G A1622 37.873 -31.771 16.220 1.00 52.87 O
ATOM 9 C3' G A1622 37.314 -29.588 15.598 1.00 54.04 C
ATOM 10 O3' G A1622 37.068 -28.804 14.450 1.00 61.06 O
ATOM 11 C2' G A1622 36.065 -30.228 16.190 1.00 51.26 C
ATOM 12 O2' G A1622 35.158 -30.678 15.210 1.00 43.03 O
ATOM 13 C1' G A1622 36.656 -31.457 16.875 1.00 51.92 C
ATOM 14 N9 G A1622 36.923 -31.210 18.291 1.00 47.79 N
ATOM 15 C8 G A1622 38.140 -31.059 18.910 1.00 51.15 C
ATOM 16 N7 G A1622 38.039 -30.841 20.192 1.00 54.65 N
ATOM 17 C5 G A1622 36.675 -30.845 20.433 1.00 55.60 C
ATOM 18 C6 G A1622 35.958 -30.656 21.636 1.00 54.87 C
ATOM 19 O6 G A1622 36.395 -30.412 22.755 1.00 57.41 O
ATOM 20 N1 G A1622 34.590 -30.756 21.439 1.00 52.75 N
ATOM 21 C2 G A1622 33.987 -30.988 20.232 1.00 59.95 C
ATOM 22 N2 G A1622 32.656 -31.053 20.251 1.00 64.06 N
ATOM 23 N3 G A1622 34.641 -31.148 19.093 1.00 57.30 N
ATOM 24 C4 G A1622 35.974 -31.072 19.270 1.00 52.64 C
ATOM 25 P C A1623 37.310 -27.221 14.513 1.00 54.90 P
ATOM 26 OP1 C A1623 37.124 -26.743 13.120 1.00 55.90 O
ATOM 27 OP2 C A1623 38.574 -26.902 15.240 1.00 45.19 O
ATOM 28 O5' C A1623 36.097 -26.707 15.405 1.00 55.01 O
TER

ATOM 1 O3' C B1570 29.251 -33.366 17.589 1.00 46.43 O
ATOM 2 P A B1571 29.785 -32.015 16.907 1.00 65.65 P
ATOM 3 OP1 A B1571 30.969 -32.345 16.077 1.00 55.42 O
ATOM 4 OP2 A B1571 29.921 -31.047 18.036 1.00 62.14 O
ATOM 5 O5' A B1571 28.634 -31.565 15.890 1.00 63.08 O
ATOM 6 C5' A B1571 27.531 -30.751 16.303 1.00 61.33 C
ATOM 7 C4' A B1571 27.330 -29.587 15.344 1.00 58.78 C
ATOM 8 O4' A B1571 28.369 -28.585 15.520 1.00 55.21 O
ATOM 9 C3' A B1571 27.378 -29.916 13.866 1.00 59.29 C
ATOM 10 O3' A B1571 26.159 -30.481 13.445 1.00 56.76 O
ATOM 11 C2' A B1571 27.730 -28.572 13.230 1.00 59.37 C
ATOM 12 O2' A B1571 26.649 -27.681 13.048 1.00 54.29 O
ATOM 13 C1' A B1571 28.683 -27.992 14.273 1.00 58.08 C
ATOM 14 N9 A B1571 30.033 -28.398 13.919 1.00 59.85 N
ATOM 15 C8 A B1571 30.778 -29.429 14.439 1.00 58.61 C
ATOM 16 N7 A B1571 31.917 -29.616 13.825 1.00 59.18 N
ATOM 17 C5 A B1571 31.938 -28.622 12.851 1.00 59.11 C
ATOM 18 C6 A B1571 32.882 -28.284 11.848 1.00 63.25 C
ATOM 19 N6 A B1571 34.018 -28.961 11.636 1.00 62.15 N
ATOM 20 N1 A B1571 32.603 -27.219 11.053 1.00 73.20 N
ATOM 21 C2 A B1571 31.445 -26.561 11.244 1.00 71.01 C
ATOM 22 N3 A B1571 30.476 -26.796 12.138 1.00 70.20 N
ATOM 23 C4 A B1571 30.791 -27.850 12.918 1.00 62.13 C
ATOM 24 P A B1572 26.188 -31.732 12.449 1.00 57.42 P
ATOM 25 OP1 A B1572 24.785 -32.200 12.245 1.00 57.61 O
ATOM 26 OP2 A B1572 27.243 -32.685 12.908 1.00 52.91 O
ATOM 27 O5' A B1572 26.655 -31.092 11.072 1.00 56.28 O
TER

Atoms:
OP1: (42.477,-30.395,15.847)
OP2: (41.728,-29.457,18.123)
C3': (37.314,-29.588,15.598)
C1': (36.656,-31.457,16.875)
C5': (39.624,-30.527,15.110)
O6: (36.395,-30.412,22.755)
O4': (37.873,-31.771,16.220)
C8: (38.140,-31.059,18.910)
C2: (33.987,-30.988,20.232)
C6: (35.958,-30.656,21.636)
C5: (36.675,-30.845,20.433)
C4: (35.974,-31.072,19.270)
P: (41.479,-30.333,16.955)
C4': (38.147,-30.785,15.196)
C2': (36.065,-30.228,16.190)
O2': (35.158,-30.678,15.210)
N1: (34.590,-30.756,21.439)
N2: (32.656,-31.053,20.251)
N3: (34.641,-31.148,19.093)
N7: (38.039,-30.841,20.192)
N9: (36.923,-31.210,18.291)
O5': (40.085,-29.906,16.301)
O3': (37.068,-28.804,14.450)
OP1: (30.969,-32.345,16.077)
OP2: (29.921,-31.047,18.036)
C3': (27.378,-29.916,13.866)
C1': (28.683,-27.992,14.273)
C5': (27.531,-30.751,16.303)
O4': (28.369,-28.585,15.520)
C8: (30.778,-29.429,14.439)
O2': (26.649,-27.681,13.048)
C6: (32.882,-28.284,11.848)
C5: (31.938,-28.622,12.851)
C4: (30.791,-27.850,12.918)
P: (29.785,-32.015,16.907)
C4': (27.330,-29.587,15.344)
C2': (27.730,-28.572,13.230)
C2: (31.445,-26.561,11.244)
N1: (32.603,-27.219,11.053)
N3: (30.476,-26.796,12.138)
N6: (34.018,-28.961,11.636)
N7: (31.917,-29.616,13.825)
N9: (30.033,-28.398,13.919)
O5': (28.634,-31.565,15.890)
O3': (26.159,-30.481,13.445)
Image (generated by PyMOL):
PyMOL image
show in jmol