ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2423:2424

Extra

PDB:
ATOM 1 O3' G A 422 -40.686 59.475 51.303 1.00 80.32 O
ATOM 2 P C A 423 -42.019 59.404 50.423 1.00 64.83 P
ATOM 3 OP1 C A 423 -41.713 58.761 49.146 1.00 65.10 O
ATOM 4 OP2 C A 423 -42.533 60.741 50.400 1.00 65.43 O
ATOM 5 O5' C A 423 -42.953 58.469 51.254 1.00 64.49 O
ATOM 6 C5' C A 423 -43.363 57.233 50.718 1.00 64.48 C
ATOM 7 C4' C A 423 -44.780 57.293 50.204 1.00 65.19 C
ATOM 8 O4' C A 423 -44.859 58.135 49.016 1.00 65.99 O
ATOM 9 C3' C A 423 -45.361 55.960 49.770 1.00 65.20 C
ATOM 10 O3' C A 423 -45.894 55.254 50.853 1.00 64.73 O
ATOM 11 C2' C A 423 -46.396 56.346 48.718 1.00 66.15 C
ATOM 12 O2' C A 423 -47.610 56.775 49.317 1.00 66.44 O
ATOM 13 C1' C A 423 -45.721 57.546 48.057 1.00 66.56 C
ATOM 14 N1 C A 423 -44.913 57.129 46.874 1.00 66.71 N
ATOM 15 C2 C A 423 -45.614 56.763 45.714 1.00 67.42 C
ATOM 16 O2 C A 423 -46.882 56.816 45.699 1.00 67.91 O
ATOM 17 N3 C A 423 -44.904 56.361 44.630 1.00 67.61 N
ATOM 18 C4 C A 423 -43.583 56.300 44.656 1.00 67.13 C
ATOM 19 N4 C A 423 -42.979 55.890 43.533 1.00 67.40 N
ATOM 20 C5 C A 423 -42.850 56.659 45.830 1.00 66.40 C
ATOM 21 C6 C A 423 -43.541 57.061 46.899 1.00 66.22 C
ATOM 22 P A A 424 -45.797 53.667 50.921 1.00 60.99 P
ATOM 23 OP1 A A 424 -44.608 53.337 51.754 1.00 60.15 O
ATOM 24 OP2 A A 424 -45.870 53.142 49.534 1.00 61.49 O
ATOM 25 O5' A A 424 -47.127 53.327 51.699 1.00 61.04 O
TER

ATOM 1 O3' C B 423 -45.894 55.254 50.853 1.00 64.73 O
ATOM 2 P A B 424 -45.797 53.667 50.921 1.00 60.99 P
ATOM 3 OP1 A B 424 -44.608 53.337 51.754 1.00 60.15 O
ATOM 4 OP2 A B 424 -45.870 53.142 49.534 1.00 61.49 O
ATOM 5 O5' A B 424 -47.127 53.327 51.699 1.00 61.04 O
ATOM 6 C5' A B 424 -47.138 53.310 53.095 1.00 60.48 C
ATOM 7 C4' A B 424 -48.207 54.177 53.680 1.00 60.85 C
ATOM 8 O4' A B 424 -48.460 53.692 55.016 1.00 60.31 O
ATOM 9 C3' A B 424 -47.835 55.656 53.838 1.00 61.04 C
ATOM 10 O3' A B 424 -48.417 56.492 52.822 1.00 61.89 O
ATOM 11 C2' A B 424 -48.244 55.997 55.281 1.00 60.73 C
ATOM 12 O2' A B 424 -49.593 56.411 55.363 1.00 61.33 O
ATOM 13 C1' A B 424 -48.121 54.656 55.961 1.00 60.08 C
ATOM 14 N9 A B 424 -46.734 54.396 56.408 1.00 59.36 N
ATOM 15 C8 A B 424 -45.741 53.625 55.830 1.00 59.03 C
ATOM 16 N7 A B 424 -44.609 53.606 56.466 1.00 58.43 N
ATOM 17 C5 A B 424 -44.878 54.417 57.566 1.00 58.34 C
ATOM 18 C6 A B 424 -44.107 54.819 58.654 1.00 57.84 C
ATOM 19 N6 A B 424 -42.861 54.444 58.837 1.00 57.31 N
ATOM 20 N1 A B 424 -44.663 55.631 59.569 1.00 57.94 N
ATOM 21 C2 A B 424 -45.924 56.016 59.407 1.00 58.51 C
ATOM 22 N3 A B 424 -46.757 55.700 58.439 1.00 59.02 N
ATOM 23 C4 A B 424 -46.165 54.907 57.540 1.00 58.90 C
ATOM 24 P G B 425 -48.301 58.121 52.858 1.00 65.00 P
ATOM 25 OP1 G B 425 -47.598 58.538 51.628 1.00 65.37 O
ATOM 26 OP2 G B 425 -47.710 58.519 54.167 1.00 64.38 O
ATOM 27 O5' G B 425 -49.837 58.594 52.791 1.00 65.77 O
TER

Atoms:
C2: (-45.614,56.763,45.714)
OP1: (-41.713,58.761,49.146)
OP2: (-42.533,60.741,50.400)
C4: (-43.583,56.300,44.656)
O5': (-42.953,58.469,51.254)
C3': (-45.361,55.960,49.770)
C1': (-45.721,57.546,48.057)
O4': (-44.859,58.135,49.016)
C5': (-43.363,57.233,50.718)
P: (-42.019,59.404,50.423)
O2: (-46.882,56.816,45.699)
C4': (-44.780,57.293,50.204)
C2': (-46.396,56.346,48.718)
O2': (-47.610,56.775,49.317)
N1: (-44.913,57.129,46.874)
N3: (-44.904,56.361,44.630)
N4: (-42.979,55.890,43.533)
C6: (-43.541,57.061,46.899)
C5: (-42.850,56.659,45.830)
O3': (-45.894,55.254,50.853)
OP1: (-44.608,53.337,51.754)
OP2: (-45.870,53.142,49.534)
C3': (-47.835,55.656,53.838)
C1': (-48.121,54.656,55.961)
C5': (-47.138,53.310,53.095)
O4': (-48.460,53.692,55.016)
C8: (-45.741,53.625,55.830)
O2': (-49.593,56.411,55.363)
C6: (-44.107,54.819,58.654)
C5: (-44.878,54.417,57.566)
C4: (-46.165,54.907,57.540)
P: (-45.797,53.667,50.921)
C4': (-48.207,54.177,53.680)
C2': (-48.244,55.997,55.281)
C2: (-45.924,56.016,59.407)
N1: (-44.663,55.631,59.569)
N3: (-46.757,55.700,58.439)
N6: (-42.861,54.444,58.837)
N7: (-44.609,53.606,56.466)
N9: (-46.734,54.396,56.408)
O5': (-47.127,53.327,51.699)
O3': (-48.417,56.492,52.822)
Image (generated by PyMOL):
PyMOL image
show in jmol