Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02479:01927
Extra
PDB:
ATOM 1 O3' A A2478 85.546 111.881 104.499 1.00 91.20 O
ATOM 2 P G A2479 87.030 112.350 104.884 1.00 86.04 P
ATOM 3 OP1 G A2479 87.996 111.500 104.124 1.00 85.40 O
ATOM 4 OP2 G A2479 87.097 112.391 106.368 1.00 85.76 O
ATOM 5 O5' G A2479 87.110 113.849 104.341 1.00 80.35 O
ATOM 6 C5' G A2479 88.052 114.210 103.313 1.00 69.34 C
ATOM 7 C4' G A2479 89.324 114.737 103.933 1.00 61.13 C
ATOM 8 O4' G A2479 90.452 114.311 103.132 1.00 56.23 O
ATOM 9 C3' G A2479 89.477 116.249 104.062 1.00 57.75 C
ATOM 10 O3' G A2479 88.856 116.789 105.231 1.00 56.12 O
ATOM 11 C2' G A2479 90.987 116.388 104.126 1.00 56.21 C
ATOM 12 O2' G A2479 91.480 116.050 105.408 1.00 53.88 O
ATOM 13 C1' G A2479 91.422 115.339 103.098 1.00 55.13 C
ATOM 14 N9 G A2479 91.447 115.878 101.741 1.00 53.17 N
ATOM 15 C8 G A2479 90.485 115.713 100.778 1.00 53.33 C
ATOM 16 N7 G A2479 90.742 116.364 99.681 1.00 53.42 N
ATOM 17 C5 G A2479 91.953 116.988 99.929 1.00 52.09 C
ATOM 18 C6 G A2479 92.713 117.844 99.116 1.00 51.85 C
ATOM 19 O6 G A2479 92.450 118.265 97.994 1.00 54.05 O
ATOM 20 N1 G A2479 93.888 118.228 99.737 1.00 51.49 N
ATOM 21 C2 G A2479 94.276 117.847 100.989 1.00 51.87 C
ATOM 22 N2 G A2479 95.463 118.302 101.400 1.00 51.18 N
ATOM 23 N3 G A2479 93.557 117.072 101.777 1.00 52.03 N
ATOM 24 C4 G A2479 92.415 116.678 101.184 1.00 52.35 C
ATOM 25 P G A2480 88.417 118.342 105.269 1.00 56.25 P
ATOM 26 OP1 G A2480 87.865 118.621 106.623 1.00 54.55 O
ATOM 27 OP2 G A2480 87.603 118.652 104.064 1.00 56.61 O
ATOM 28 O5' G A2480 89.780 119.153 105.157 1.00 53.84 O
TER
ATOM 1 O3' U B1926 98.679 117.642 103.804 1.00 59.67 O
ATOM 2 P A B1927 97.472 116.836 104.493 1.00 60.25 P
ATOM 3 OP1 A B1927 97.740 115.398 104.262 1.00 59.22 O
ATOM 4 OP2 A B1927 96.181 117.424 104.063 1.00 61.24 O
ATOM 5 O5' A B1927 97.634 117.127 106.043 1.00 59.81 O
ATOM 6 C5' A B1927 98.755 116.622 106.748 1.00 60.98 C
ATOM 7 C4' A B1927 98.304 115.926 107.996 1.00 61.56 C
ATOM 8 O4' A B1927 99.466 115.332 108.631 1.00 64.22 O
ATOM 9 C3' A B1927 97.667 116.827 109.042 1.00 60.99 C
ATOM 10 O3' A B1927 96.758 116.036 109.793 1.00 60.88 O
ATOM 11 C2' A B1927 98.861 117.203 109.908 1.00 61.77 C
ATOM 12 O2' A B1927 98.487 117.566 111.217 1.00 63.42 O
ATOM 13 C1' A B1927 99.647 115.892 109.913 1.00 63.88 C
ATOM 14 N9 A B1927 101.083 116.052 110.138 1.00 66.18 N
ATOM 15 C8 A B1927 102.008 116.629 109.300 1.00 66.87 C
ATOM 16 N7 A B1927 103.222 116.658 109.792 1.00 67.89 N
ATOM 17 C5 A B1927 103.093 116.048 111.032 1.00 68.53 C
ATOM 18 C6 A B1927 104.019 115.775 112.047 1.00 69.61 C
ATOM 19 N6 A B1927 105.314 116.090 111.968 1.00 70.89 N
ATOM 20 N1 A B1927 103.567 115.159 113.163 1.00 70.42 N
ATOM 21 C2 A B1927 102.268 114.842 113.237 1.00 69.01 C
ATOM 22 N3 A B1927 101.299 115.046 112.348 1.00 68.70 N
ATOM 23 C4 A B1927 101.783 115.662 111.255 1.00 68.00 C
ATOM 24 P C B1928 95.249 116.530 110.017 1.00 60.57 P
ATOM 25 OP1 C B1928 94.787 117.144 108.746 1.00 59.91 O
ATOM 26 OP2 C B1928 95.221 117.323 111.275 1.00 59.22 O
ATOM 27 O5' C B1928 94.467 115.166 110.289 1.00 60.14 O
TER
ATOM 2 P G A2479 87.030 112.350 104.884 1.00 86.04 P
ATOM 3 OP1 G A2479 87.996 111.500 104.124 1.00 85.40 O
ATOM 4 OP2 G A2479 87.097 112.391 106.368 1.00 85.76 O
ATOM 5 O5' G A2479 87.110 113.849 104.341 1.00 80.35 O
ATOM 6 C5' G A2479 88.052 114.210 103.313 1.00 69.34 C
ATOM 7 C4' G A2479 89.324 114.737 103.933 1.00 61.13 C
ATOM 8 O4' G A2479 90.452 114.311 103.132 1.00 56.23 O
ATOM 9 C3' G A2479 89.477 116.249 104.062 1.00 57.75 C
ATOM 10 O3' G A2479 88.856 116.789 105.231 1.00 56.12 O
ATOM 11 C2' G A2479 90.987 116.388 104.126 1.00 56.21 C
ATOM 12 O2' G A2479 91.480 116.050 105.408 1.00 53.88 O
ATOM 13 C1' G A2479 91.422 115.339 103.098 1.00 55.13 C
ATOM 14 N9 G A2479 91.447 115.878 101.741 1.00 53.17 N
ATOM 15 C8 G A2479 90.485 115.713 100.778 1.00 53.33 C
ATOM 16 N7 G A2479 90.742 116.364 99.681 1.00 53.42 N
ATOM 17 C5 G A2479 91.953 116.988 99.929 1.00 52.09 C
ATOM 18 C6 G A2479 92.713 117.844 99.116 1.00 51.85 C
ATOM 19 O6 G A2479 92.450 118.265 97.994 1.00 54.05 O
ATOM 20 N1 G A2479 93.888 118.228 99.737 1.00 51.49 N
ATOM 21 C2 G A2479 94.276 117.847 100.989 1.00 51.87 C
ATOM 22 N2 G A2479 95.463 118.302 101.400 1.00 51.18 N
ATOM 23 N3 G A2479 93.557 117.072 101.777 1.00 52.03 N
ATOM 24 C4 G A2479 92.415 116.678 101.184 1.00 52.35 C
ATOM 25 P G A2480 88.417 118.342 105.269 1.00 56.25 P
ATOM 26 OP1 G A2480 87.865 118.621 106.623 1.00 54.55 O
ATOM 27 OP2 G A2480 87.603 118.652 104.064 1.00 56.61 O
ATOM 28 O5' G A2480 89.780 119.153 105.157 1.00 53.84 O
TER
ATOM 1 O3' U B1926 98.679 117.642 103.804 1.00 59.67 O
ATOM 2 P A B1927 97.472 116.836 104.493 1.00 60.25 P
ATOM 3 OP1 A B1927 97.740 115.398 104.262 1.00 59.22 O
ATOM 4 OP2 A B1927 96.181 117.424 104.063 1.00 61.24 O
ATOM 5 O5' A B1927 97.634 117.127 106.043 1.00 59.81 O
ATOM 6 C5' A B1927 98.755 116.622 106.748 1.00 60.98 C
ATOM 7 C4' A B1927 98.304 115.926 107.996 1.00 61.56 C
ATOM 8 O4' A B1927 99.466 115.332 108.631 1.00 64.22 O
ATOM 9 C3' A B1927 97.667 116.827 109.042 1.00 60.99 C
ATOM 10 O3' A B1927 96.758 116.036 109.793 1.00 60.88 O
ATOM 11 C2' A B1927 98.861 117.203 109.908 1.00 61.77 C
ATOM 12 O2' A B1927 98.487 117.566 111.217 1.00 63.42 O
ATOM 13 C1' A B1927 99.647 115.892 109.913 1.00 63.88 C
ATOM 14 N9 A B1927 101.083 116.052 110.138 1.00 66.18 N
ATOM 15 C8 A B1927 102.008 116.629 109.300 1.00 66.87 C
ATOM 16 N7 A B1927 103.222 116.658 109.792 1.00 67.89 N
ATOM 17 C5 A B1927 103.093 116.048 111.032 1.00 68.53 C
ATOM 18 C6 A B1927 104.019 115.775 112.047 1.00 69.61 C
ATOM 19 N6 A B1927 105.314 116.090 111.968 1.00 70.89 N
ATOM 20 N1 A B1927 103.567 115.159 113.163 1.00 70.42 N
ATOM 21 C2 A B1927 102.268 114.842 113.237 1.00 69.01 C
ATOM 22 N3 A B1927 101.299 115.046 112.348 1.00 68.70 N
ATOM 23 C4 A B1927 101.783 115.662 111.255 1.00 68.00 C
ATOM 24 P C B1928 95.249 116.530 110.017 1.00 60.57 P
ATOM 25 OP1 C B1928 94.787 117.144 108.746 1.00 59.91 O
ATOM 26 OP2 C B1928 95.221 117.323 111.275 1.00 59.22 O
ATOM 27 O5' C B1928 94.467 115.166 110.289 1.00 60.14 O
TER
Atoms:
OP1: (87.996,111.500,104.124)
OP2: (87.097,112.391,106.368)
C3': (89.477,116.249,104.062)
C1': (91.422,115.339,103.098)
C5': (88.052,114.210,103.313)
O6: (92.450,118.265,97.994)
O4': (90.452,114.311,103.132)
C8: (90.485,115.713,100.778)
C2: (94.276,117.847,100.989)
C6: (92.713,117.844,99.116)
C5: (91.953,116.988,99.929)
C4: (92.415,116.678,101.184)
P: (87.030,112.350,104.884)
C4': (89.324,114.737,103.933)
C2': (90.987,116.388,104.126)
O2': (91.480,116.050,105.408)
N1: (93.888,118.228,99.737)
N2: (95.463,118.302,101.400)
N3: (93.557,117.072,101.777)
N7: (90.742,116.364,99.681)
N9: (91.447,115.878,101.741)
O5': (87.110,113.849,104.341)
O3': (88.856,116.789,105.231)
OP2: (87.097,112.391,106.368)
C3': (89.477,116.249,104.062)
C1': (91.422,115.339,103.098)
C5': (88.052,114.210,103.313)
O6: (92.450,118.265,97.994)
O4': (90.452,114.311,103.132)
C8: (90.485,115.713,100.778)
C2: (94.276,117.847,100.989)
C6: (92.713,117.844,99.116)
C5: (91.953,116.988,99.929)
C4: (92.415,116.678,101.184)
P: (87.030,112.350,104.884)
C4': (89.324,114.737,103.933)
C2': (90.987,116.388,104.126)
O2': (91.480,116.050,105.408)
N1: (93.888,118.228,99.737)
N2: (95.463,118.302,101.400)
N3: (93.557,117.072,101.777)
N7: (90.742,116.364,99.681)
N9: (91.447,115.878,101.741)
O5': (87.110,113.849,104.341)
O3': (88.856,116.789,105.231)
OP1: (97.740,115.398,104.262)
OP2: (96.181,117.424,104.063)
C3': (97.667,116.827,109.042)
C1': (99.647,115.892,109.913)
C5': (98.755,116.622,106.748)
O4': (99.466,115.332,108.631)
C8: (102.008,116.629,109.300)
O2': (98.487,117.566,111.217)
C6: (104.019,115.775,112.047)
C5: (103.093,116.048,111.032)
C4: (101.783,115.662,111.255)
P: (97.472,116.836,104.493)
C4': (98.304,115.926,107.996)
C2': (98.861,117.203,109.908)
C2: (102.268,114.842,113.237)
N1: (103.567,115.159,113.163)
N3: (101.299,115.046,112.348)
N6: (105.314,116.090,111.968)
N7: (103.222,116.658,109.792)
N9: (101.083,116.052,110.138)
O5': (97.634,117.127,106.043)
O3': (96.758,116.036,109.793)
OP2: (96.181,117.424,104.063)
C3': (97.667,116.827,109.042)
C1': (99.647,115.892,109.913)
C5': (98.755,116.622,106.748)
O4': (99.466,115.332,108.631)
C8: (102.008,116.629,109.300)
O2': (98.487,117.566,111.217)
C6: (104.019,115.775,112.047)
C5: (103.093,116.048,111.032)
C4: (101.783,115.662,111.255)
P: (97.472,116.836,104.493)
C4': (98.304,115.926,107.996)
C2': (98.861,117.203,109.908)
C2: (102.268,114.842,113.237)
N1: (103.567,115.159,113.163)
N3: (101.299,115.046,112.348)
N6: (105.314,116.090,111.968)
N7: (103.222,116.658,109.792)
N9: (101.083,116.052,110.138)
O5': (97.634,117.127,106.043)
O3': (96.758,116.036,109.793)
Image (generated by PyMOL):