Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B72:B73
Extra
PDB:
ATOM 1 O3' G A 71 -12.666 -35.201 33.140 1.00 67.48 O
ATOM 2 P C A 72 -12.773 -36.054 34.484 1.00 67.04 P
ATOM 3 OP1 C A 72 -13.762 -37.127 34.228 1.00 67.11 O
ATOM 4 OP2 C A 72 -12.963 -35.131 35.621 1.00 67.70 O
ATOM 5 O5' C A 72 -11.312 -36.683 34.626 1.00 66.40 O
ATOM 6 C5' C A 72 -10.843 -37.673 33.726 1.00 65.29 C
ATOM 7 C4' C A 72 -9.599 -38.332 34.287 1.00 64.80 C
ATOM 8 O4' C A 72 -8.493 -37.409 34.191 1.00 64.08 O
ATOM 9 C3' C A 72 -9.638 -38.693 35.765 1.00 65.06 C
ATOM 10 O3' C A 72 -10.275 -39.946 35.942 1.00 66.43 O
ATOM 11 C2' C A 72 -8.157 -38.790 36.095 1.00 63.86 C
ATOM 12 O2' C A 72 -7.634 -40.068 35.797 1.00 62.83 O
ATOM 13 C1' C A 72 -7.540 -37.738 35.178 1.00 63.47 C
ATOM 14 N1 C A 72 -7.135 -36.492 35.890 1.00 63.60 N
ATOM 15 C2 C A 72 -5.830 -36.378 36.397 1.00 63.66 C
ATOM 16 O2 C A 72 -5.028 -37.311 36.247 1.00 63.44 O
ATOM 17 N3 C A 72 -5.478 -35.236 37.044 1.00 63.83 N
ATOM 18 C4 C A 72 -6.362 -34.246 37.193 1.00 64.00 C
ATOM 19 N4 C A 72 -5.962 -33.147 37.832 1.00 64.49 N
ATOM 20 C5 C A 72 -7.692 -34.337 36.685 1.00 64.36 C
ATOM 21 C6 C A 72 -8.030 -35.466 36.048 1.00 64.12 C
ATOM 22 P A A 73 -11.789 -40.050 36.443 1.00 67.49 P
ATOM 23 OP1 A A 73 -12.633 -39.167 35.617 1.00 67.66 O
ATOM 24 OP2 A A 73 -11.810 -39.907 37.916 1.00 67.77 O
ATOM 25 O5' A A 73 -12.140 -41.557 36.047 1.00 68.58 O
TER
ATOM 1 O3' C B 72 -10.275 -39.946 35.942 1.00 66.43 O
ATOM 2 P A B 73 -11.789 -40.050 36.443 1.00 67.49 P
ATOM 3 OP1 A B 73 -12.633 -39.167 35.617 1.00 67.66 O
ATOM 4 OP2 A B 73 -11.810 -39.907 37.916 1.00 67.77 O
ATOM 5 O5' A B 73 -12.140 -41.557 36.047 1.00 68.58 O
ATOM 6 C5' A B 73 -11.516 -42.674 36.673 1.00 69.75 C
ATOM 7 C4' A B 73 -12.516 -43.796 36.889 1.00 71.00 C
ATOM 8 O4' A B 73 -12.698 -43.991 38.316 1.00 71.89 O
ATOM 9 C3' A B 73 -13.930 -43.536 36.383 1.00 71.81 C
ATOM 10 O3' A B 73 -14.077 -43.815 34.995 1.00 71.57 O
ATOM 11 C2' A B 73 -14.748 -44.458 37.282 1.00 72.59 C
ATOM 12 O2' A B 73 -14.646 -45.829 36.938 1.00 72.67 O
ATOM 13 C1' A B 73 -14.073 -44.164 38.619 1.00 72.89 C
ATOM 14 N9 A B 73 -14.602 -42.956 39.263 1.00 73.77 N
ATOM 15 C8 A B 73 -13.984 -41.739 39.380 1.00 74.11 C
ATOM 16 N7 A B 73 -14.695 -40.826 39.997 1.00 74.73 N
ATOM 17 C5 A B 73 -15.868 -41.487 40.308 1.00 75.12 C
ATOM 18 C6 A B 73 -17.041 -41.069 40.973 1.00 75.91 C
ATOM 19 N6 A B 73 -17.196 -39.830 41.449 1.00 76.72 N
ATOM 20 N1 A B 73 -18.043 -41.971 41.125 1.00 75.91 N
ATOM 21 C2 A B 73 -17.875 -43.213 40.640 1.00 75.50 C
ATOM 22 N3 A B 73 -16.815 -43.721 40.000 1.00 75.02 N
ATOM 23 C4 A B 73 -15.834 -42.802 39.864 1.00 74.64 C
ATOM 24 P A B 74 -14.981 -42.837 34.105 1.00 72.05 P
ATOM 25 OP1 A B 74 -14.843 -43.266 32.696 1.00 71.99 O
ATOM 26 OP2 A B 74 -14.681 -41.435 34.473 1.00 71.95 O
ATOM 27 O5' A B 74 -16.475 -43.151 34.590 1.00 72.90 O
TER
ATOM 2 P C A 72 -12.773 -36.054 34.484 1.00 67.04 P
ATOM 3 OP1 C A 72 -13.762 -37.127 34.228 1.00 67.11 O
ATOM 4 OP2 C A 72 -12.963 -35.131 35.621 1.00 67.70 O
ATOM 5 O5' C A 72 -11.312 -36.683 34.626 1.00 66.40 O
ATOM 6 C5' C A 72 -10.843 -37.673 33.726 1.00 65.29 C
ATOM 7 C4' C A 72 -9.599 -38.332 34.287 1.00 64.80 C
ATOM 8 O4' C A 72 -8.493 -37.409 34.191 1.00 64.08 O
ATOM 9 C3' C A 72 -9.638 -38.693 35.765 1.00 65.06 C
ATOM 10 O3' C A 72 -10.275 -39.946 35.942 1.00 66.43 O
ATOM 11 C2' C A 72 -8.157 -38.790 36.095 1.00 63.86 C
ATOM 12 O2' C A 72 -7.634 -40.068 35.797 1.00 62.83 O
ATOM 13 C1' C A 72 -7.540 -37.738 35.178 1.00 63.47 C
ATOM 14 N1 C A 72 -7.135 -36.492 35.890 1.00 63.60 N
ATOM 15 C2 C A 72 -5.830 -36.378 36.397 1.00 63.66 C
ATOM 16 O2 C A 72 -5.028 -37.311 36.247 1.00 63.44 O
ATOM 17 N3 C A 72 -5.478 -35.236 37.044 1.00 63.83 N
ATOM 18 C4 C A 72 -6.362 -34.246 37.193 1.00 64.00 C
ATOM 19 N4 C A 72 -5.962 -33.147 37.832 1.00 64.49 N
ATOM 20 C5 C A 72 -7.692 -34.337 36.685 1.00 64.36 C
ATOM 21 C6 C A 72 -8.030 -35.466 36.048 1.00 64.12 C
ATOM 22 P A A 73 -11.789 -40.050 36.443 1.00 67.49 P
ATOM 23 OP1 A A 73 -12.633 -39.167 35.617 1.00 67.66 O
ATOM 24 OP2 A A 73 -11.810 -39.907 37.916 1.00 67.77 O
ATOM 25 O5' A A 73 -12.140 -41.557 36.047 1.00 68.58 O
TER
ATOM 1 O3' C B 72 -10.275 -39.946 35.942 1.00 66.43 O
ATOM 2 P A B 73 -11.789 -40.050 36.443 1.00 67.49 P
ATOM 3 OP1 A B 73 -12.633 -39.167 35.617 1.00 67.66 O
ATOM 4 OP2 A B 73 -11.810 -39.907 37.916 1.00 67.77 O
ATOM 5 O5' A B 73 -12.140 -41.557 36.047 1.00 68.58 O
ATOM 6 C5' A B 73 -11.516 -42.674 36.673 1.00 69.75 C
ATOM 7 C4' A B 73 -12.516 -43.796 36.889 1.00 71.00 C
ATOM 8 O4' A B 73 -12.698 -43.991 38.316 1.00 71.89 O
ATOM 9 C3' A B 73 -13.930 -43.536 36.383 1.00 71.81 C
ATOM 10 O3' A B 73 -14.077 -43.815 34.995 1.00 71.57 O
ATOM 11 C2' A B 73 -14.748 -44.458 37.282 1.00 72.59 C
ATOM 12 O2' A B 73 -14.646 -45.829 36.938 1.00 72.67 O
ATOM 13 C1' A B 73 -14.073 -44.164 38.619 1.00 72.89 C
ATOM 14 N9 A B 73 -14.602 -42.956 39.263 1.00 73.77 N
ATOM 15 C8 A B 73 -13.984 -41.739 39.380 1.00 74.11 C
ATOM 16 N7 A B 73 -14.695 -40.826 39.997 1.00 74.73 N
ATOM 17 C5 A B 73 -15.868 -41.487 40.308 1.00 75.12 C
ATOM 18 C6 A B 73 -17.041 -41.069 40.973 1.00 75.91 C
ATOM 19 N6 A B 73 -17.196 -39.830 41.449 1.00 76.72 N
ATOM 20 N1 A B 73 -18.043 -41.971 41.125 1.00 75.91 N
ATOM 21 C2 A B 73 -17.875 -43.213 40.640 1.00 75.50 C
ATOM 22 N3 A B 73 -16.815 -43.721 40.000 1.00 75.02 N
ATOM 23 C4 A B 73 -15.834 -42.802 39.864 1.00 74.64 C
ATOM 24 P A B 74 -14.981 -42.837 34.105 1.00 72.05 P
ATOM 25 OP1 A B 74 -14.843 -43.266 32.696 1.00 71.99 O
ATOM 26 OP2 A B 74 -14.681 -41.435 34.473 1.00 71.95 O
ATOM 27 O5' A B 74 -16.475 -43.151 34.590 1.00 72.90 O
TER
Atoms:
C2: (-5.830,-36.378,36.397)
OP1: (-13.762,-37.127,34.228)
OP2: (-12.963,-35.131,35.621)
C4: (-6.362,-34.246,37.193)
O5': (-11.312,-36.683,34.626)
C3': (-9.638,-38.693,35.765)
C1': (-7.540,-37.738,35.178)
O4': (-8.493,-37.409,34.191)
C5': (-10.843,-37.673,33.726)
P: (-12.773,-36.054,34.484)
O2: (-5.028,-37.311,36.247)
C4': (-9.599,-38.332,34.287)
C2': (-8.157,-38.790,36.095)
O2': (-7.634,-40.068,35.797)
N1: (-7.135,-36.492,35.890)
N3: (-5.478,-35.236,37.044)
N4: (-5.962,-33.147,37.832)
C6: (-8.030,-35.466,36.048)
C5: (-7.692,-34.337,36.685)
O3': (-10.275,-39.946,35.942)
OP1: (-13.762,-37.127,34.228)
OP2: (-12.963,-35.131,35.621)
C4: (-6.362,-34.246,37.193)
O5': (-11.312,-36.683,34.626)
C3': (-9.638,-38.693,35.765)
C1': (-7.540,-37.738,35.178)
O4': (-8.493,-37.409,34.191)
C5': (-10.843,-37.673,33.726)
P: (-12.773,-36.054,34.484)
O2: (-5.028,-37.311,36.247)
C4': (-9.599,-38.332,34.287)
C2': (-8.157,-38.790,36.095)
O2': (-7.634,-40.068,35.797)
N1: (-7.135,-36.492,35.890)
N3: (-5.478,-35.236,37.044)
N4: (-5.962,-33.147,37.832)
C6: (-8.030,-35.466,36.048)
C5: (-7.692,-34.337,36.685)
O3': (-10.275,-39.946,35.942)
OP1: (-12.633,-39.167,35.617)
OP2: (-11.810,-39.907,37.916)
C3': (-13.930,-43.536,36.383)
C1': (-14.073,-44.164,38.619)
C5': (-11.516,-42.674,36.673)
O4': (-12.698,-43.991,38.316)
C8: (-13.984,-41.739,39.380)
O2': (-14.646,-45.829,36.938)
C6: (-17.041,-41.069,40.973)
C5: (-15.868,-41.487,40.308)
C4: (-15.834,-42.802,39.864)
P: (-11.789,-40.050,36.443)
C4': (-12.516,-43.796,36.889)
C2': (-14.748,-44.458,37.282)
C2: (-17.875,-43.213,40.640)
N1: (-18.043,-41.971,41.125)
N3: (-16.815,-43.721,40.000)
N6: (-17.196,-39.830,41.449)
N7: (-14.695,-40.826,39.997)
N9: (-14.602,-42.956,39.263)
O5': (-12.140,-41.557,36.047)
O3': (-14.077,-43.815,34.995)
OP2: (-11.810,-39.907,37.916)
C3': (-13.930,-43.536,36.383)
C1': (-14.073,-44.164,38.619)
C5': (-11.516,-42.674,36.673)
O4': (-12.698,-43.991,38.316)
C8: (-13.984,-41.739,39.380)
O2': (-14.646,-45.829,36.938)
C6: (-17.041,-41.069,40.973)
C5: (-15.868,-41.487,40.308)
C4: (-15.834,-42.802,39.864)
P: (-11.789,-40.050,36.443)
C4': (-12.516,-43.796,36.889)
C2': (-14.748,-44.458,37.282)
C2: (-17.875,-43.213,40.640)
N1: (-18.043,-41.971,41.125)
N3: (-16.815,-43.721,40.000)
N6: (-17.196,-39.830,41.449)
N7: (-14.695,-40.826,39.997)
N9: (-14.602,-42.956,39.263)
O5': (-12.140,-41.557,36.047)
O3': (-14.077,-43.815,34.995)
Image (generated by PyMOL):