Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61515:61477
Extra
PDB:
ATOM 1 O3' U A1514 264.798 -70.143 276.625 1.00 68.38 O
ATOM 2 P G A1515 265.684 -71.483 276.788 1.00 71.71 P
ATOM 3 OP1 G A1515 264.732 -72.621 277.125 1.00 71.58 O
ATOM 4 OP2 G A1515 266.791 -71.155 277.739 1.00 72.03 O
ATOM 5 O5' G A1515 266.277 -71.688 275.333 1.00 71.93 O
ATOM 6 C5' G A1515 267.110 -70.718 274.750 1.00 72.07 C
ATOM 7 C4' G A1515 266.667 -70.422 273.359 1.00 71.90 C
ATOM 8 O4' G A1515 266.648 -71.661 272.595 1.00 72.11 O
ATOM 9 C3' G A1515 265.265 -69.828 273.263 1.00 71.36 C
ATOM 10 O3' G A1515 265.257 -68.733 272.363 1.00 71.22 O
ATOM 11 C2' G A1515 264.421 -70.962 272.700 1.00 71.28 C
ATOM 12 O2' G A1515 263.329 -70.544 271.903 1.00 70.92 O
ATOM 13 C1' G A1515 265.433 -71.759 271.889 1.00 71.75 C
ATOM 14 N9 G A1515 265.048 -73.163 271.756 1.00 71.86 N
ATOM 15 C8 G A1515 265.158 -74.143 272.686 1.00 72.02 C
ATOM 16 N7 G A1515 264.617 -75.253 272.270 1.00 72.06 N
ATOM 17 C5 G A1515 264.076 -74.981 271.028 1.00 71.92 C
ATOM 18 C6 G A1515 263.350 -75.786 270.116 1.00 71.90 C
ATOM 19 O6 G A1515 263.038 -76.964 270.237 1.00 72.03 O
ATOM 20 N1 G A1515 262.965 -75.118 268.964 1.00 71.75 N
ATOM 21 C2 G A1515 263.269 -73.815 268.741 1.00 71.61 C
ATOM 22 N2 G A1515 262.868 -73.291 267.584 1.00 71.48 N
ATOM 23 N3 G A1515 263.932 -73.066 269.589 1.00 71.62 N
ATOM 24 C4 G A1515 264.316 -73.691 270.709 1.00 71.78 C
ATOM 25 P U A1516 265.287 -67.253 272.945 1.00 64.63 P
ATOM 26 OP1 U A1516 265.633 -66.368 271.832 1.00 64.63 O
ATOM 27 OP2 U A1516 266.166 -67.270 274.123 1.00 64.91 O
ATOM 28 O5' U A1516 263.782 -67.012 273.409 1.00 64.14 O
TER
ATOM 1 O3' C B1476 264.376 -71.760 264.463 1.00 66.58 O
ATOM 2 P A B1477 264.565 -70.639 265.590 1.00 64.40 P
ATOM 3 OP1 A B1477 266.016 -70.561 265.888 1.00 64.84 O
ATOM 4 OP2 A B1477 263.618 -70.955 266.688 1.00 64.08 O
ATOM 5 O5' A B1477 264.120 -69.321 264.860 1.00 64.08 O
ATOM 6 C5' A B1477 264.018 -68.111 265.579 1.00 63.77 C
ATOM 7 C4' A B1477 263.513 -67.002 264.708 1.00 63.49 C
ATOM 8 O4' A B1477 262.072 -67.072 264.598 1.00 63.08 O
ATOM 9 C3' A B1477 263.767 -65.622 265.221 1.00 63.30 C
ATOM 10 O3' A B1477 265.091 -65.201 264.965 1.00 63.66 O
ATOM 11 C2' A B1477 262.717 -64.809 264.496 1.00 62.89 C
ATOM 12 O2' A B1477 263.124 -64.596 263.175 1.00 63.07 O
ATOM 13 C1' A B1477 261.551 -65.780 264.442 1.00 62.73 C
ATOM 14 N9 A B1477 260.532 -65.537 265.483 1.00 62.36 N
ATOM 15 C8 A B1477 260.284 -66.294 266.595 1.00 62.36 C
ATOM 16 N7 A B1477 259.280 -65.888 267.336 1.00 62.02 N
ATOM 17 C5 A B1477 258.820 -64.806 266.637 1.00 61.78 C
ATOM 18 C6 A B1477 257.757 -63.956 266.914 1.00 61.41 C
ATOM 19 N6 A B1477 257.002 -64.110 268.007 1.00 61.25 N
ATOM 20 N1 A B1477 257.540 -62.948 266.034 1.00 61.24 N
ATOM 21 C2 A B1477 258.349 -62.840 264.972 1.00 61.44 C
ATOM 22 N3 A B1477 259.377 -63.597 264.609 1.00 61.81 N
ATOM 23 C4 A B1477 259.562 -64.576 265.498 1.00 61.96 C
ATOM 24 P G B1478 266.014 -64.707 266.181 1.00 62.17 P
ATOM 25 OP1 G B1478 267.434 -64.855 265.780 1.00 62.71 O
ATOM 26 OP2 G B1478 265.548 -65.407 267.357 1.00 62.06 O
ATOM 27 O5' G B1478 265.645 -63.172 266.262 1.00 61.80 O
TER
ATOM 2 P G A1515 265.684 -71.483 276.788 1.00 71.71 P
ATOM 3 OP1 G A1515 264.732 -72.621 277.125 1.00 71.58 O
ATOM 4 OP2 G A1515 266.791 -71.155 277.739 1.00 72.03 O
ATOM 5 O5' G A1515 266.277 -71.688 275.333 1.00 71.93 O
ATOM 6 C5' G A1515 267.110 -70.718 274.750 1.00 72.07 C
ATOM 7 C4' G A1515 266.667 -70.422 273.359 1.00 71.90 C
ATOM 8 O4' G A1515 266.648 -71.661 272.595 1.00 72.11 O
ATOM 9 C3' G A1515 265.265 -69.828 273.263 1.00 71.36 C
ATOM 10 O3' G A1515 265.257 -68.733 272.363 1.00 71.22 O
ATOM 11 C2' G A1515 264.421 -70.962 272.700 1.00 71.28 C
ATOM 12 O2' G A1515 263.329 -70.544 271.903 1.00 70.92 O
ATOM 13 C1' G A1515 265.433 -71.759 271.889 1.00 71.75 C
ATOM 14 N9 G A1515 265.048 -73.163 271.756 1.00 71.86 N
ATOM 15 C8 G A1515 265.158 -74.143 272.686 1.00 72.02 C
ATOM 16 N7 G A1515 264.617 -75.253 272.270 1.00 72.06 N
ATOM 17 C5 G A1515 264.076 -74.981 271.028 1.00 71.92 C
ATOM 18 C6 G A1515 263.350 -75.786 270.116 1.00 71.90 C
ATOM 19 O6 G A1515 263.038 -76.964 270.237 1.00 72.03 O
ATOM 20 N1 G A1515 262.965 -75.118 268.964 1.00 71.75 N
ATOM 21 C2 G A1515 263.269 -73.815 268.741 1.00 71.61 C
ATOM 22 N2 G A1515 262.868 -73.291 267.584 1.00 71.48 N
ATOM 23 N3 G A1515 263.932 -73.066 269.589 1.00 71.62 N
ATOM 24 C4 G A1515 264.316 -73.691 270.709 1.00 71.78 C
ATOM 25 P U A1516 265.287 -67.253 272.945 1.00 64.63 P
ATOM 26 OP1 U A1516 265.633 -66.368 271.832 1.00 64.63 O
ATOM 27 OP2 U A1516 266.166 -67.270 274.123 1.00 64.91 O
ATOM 28 O5' U A1516 263.782 -67.012 273.409 1.00 64.14 O
TER
ATOM 1 O3' C B1476 264.376 -71.760 264.463 1.00 66.58 O
ATOM 2 P A B1477 264.565 -70.639 265.590 1.00 64.40 P
ATOM 3 OP1 A B1477 266.016 -70.561 265.888 1.00 64.84 O
ATOM 4 OP2 A B1477 263.618 -70.955 266.688 1.00 64.08 O
ATOM 5 O5' A B1477 264.120 -69.321 264.860 1.00 64.08 O
ATOM 6 C5' A B1477 264.018 -68.111 265.579 1.00 63.77 C
ATOM 7 C4' A B1477 263.513 -67.002 264.708 1.00 63.49 C
ATOM 8 O4' A B1477 262.072 -67.072 264.598 1.00 63.08 O
ATOM 9 C3' A B1477 263.767 -65.622 265.221 1.00 63.30 C
ATOM 10 O3' A B1477 265.091 -65.201 264.965 1.00 63.66 O
ATOM 11 C2' A B1477 262.717 -64.809 264.496 1.00 62.89 C
ATOM 12 O2' A B1477 263.124 -64.596 263.175 1.00 63.07 O
ATOM 13 C1' A B1477 261.551 -65.780 264.442 1.00 62.73 C
ATOM 14 N9 A B1477 260.532 -65.537 265.483 1.00 62.36 N
ATOM 15 C8 A B1477 260.284 -66.294 266.595 1.00 62.36 C
ATOM 16 N7 A B1477 259.280 -65.888 267.336 1.00 62.02 N
ATOM 17 C5 A B1477 258.820 -64.806 266.637 1.00 61.78 C
ATOM 18 C6 A B1477 257.757 -63.956 266.914 1.00 61.41 C
ATOM 19 N6 A B1477 257.002 -64.110 268.007 1.00 61.25 N
ATOM 20 N1 A B1477 257.540 -62.948 266.034 1.00 61.24 N
ATOM 21 C2 A B1477 258.349 -62.840 264.972 1.00 61.44 C
ATOM 22 N3 A B1477 259.377 -63.597 264.609 1.00 61.81 N
ATOM 23 C4 A B1477 259.562 -64.576 265.498 1.00 61.96 C
ATOM 24 P G B1478 266.014 -64.707 266.181 1.00 62.17 P
ATOM 25 OP1 G B1478 267.434 -64.855 265.780 1.00 62.71 O
ATOM 26 OP2 G B1478 265.548 -65.407 267.357 1.00 62.06 O
ATOM 27 O5' G B1478 265.645 -63.172 266.262 1.00 61.80 O
TER
Atoms:
OP1: (264.732,-72.621,277.125)
OP2: (266.791,-71.155,277.739)
C3': (265.265,-69.828,273.263)
C1': (265.433,-71.759,271.889)
C5': (267.110,-70.718,274.750)
O6: (263.038,-76.964,270.237)
O4': (266.648,-71.661,272.595)
C8: (265.158,-74.143,272.686)
C2: (263.269,-73.815,268.741)
C6: (263.350,-75.786,270.116)
C5: (264.076,-74.981,271.028)
C4: (264.316,-73.691,270.709)
P: (265.684,-71.483,276.788)
C4': (266.667,-70.422,273.359)
C2': (264.421,-70.962,272.700)
O2': (263.329,-70.544,271.903)
N1: (262.965,-75.118,268.964)
N2: (262.868,-73.291,267.584)
N3: (263.932,-73.066,269.589)
N7: (264.617,-75.253,272.270)
N9: (265.048,-73.163,271.756)
O5': (266.277,-71.688,275.333)
O3': (265.257,-68.733,272.363)
OP2: (266.791,-71.155,277.739)
C3': (265.265,-69.828,273.263)
C1': (265.433,-71.759,271.889)
C5': (267.110,-70.718,274.750)
O6: (263.038,-76.964,270.237)
O4': (266.648,-71.661,272.595)
C8: (265.158,-74.143,272.686)
C2: (263.269,-73.815,268.741)
C6: (263.350,-75.786,270.116)
C5: (264.076,-74.981,271.028)
C4: (264.316,-73.691,270.709)
P: (265.684,-71.483,276.788)
C4': (266.667,-70.422,273.359)
C2': (264.421,-70.962,272.700)
O2': (263.329,-70.544,271.903)
N1: (262.965,-75.118,268.964)
N2: (262.868,-73.291,267.584)
N3: (263.932,-73.066,269.589)
N7: (264.617,-75.253,272.270)
N9: (265.048,-73.163,271.756)
O5': (266.277,-71.688,275.333)
O3': (265.257,-68.733,272.363)
OP1: (266.016,-70.561,265.888)
OP2: (263.618,-70.955,266.688)
C3': (263.767,-65.622,265.221)
C1': (261.551,-65.780,264.442)
C5': (264.018,-68.111,265.579)
O4': (262.072,-67.072,264.598)
C8: (260.284,-66.294,266.595)
O2': (263.124,-64.596,263.175)
C6: (257.757,-63.956,266.914)
C5: (258.820,-64.806,266.637)
C4: (259.562,-64.576,265.498)
P: (264.565,-70.639,265.590)
C4': (263.513,-67.002,264.708)
C2': (262.717,-64.809,264.496)
C2: (258.349,-62.840,264.972)
N1: (257.540,-62.948,266.034)
N3: (259.377,-63.597,264.609)
N6: (257.002,-64.110,268.007)
N7: (259.280,-65.888,267.336)
N9: (260.532,-65.537,265.483)
O5': (264.120,-69.321,264.860)
O3': (265.091,-65.201,264.965)
OP2: (263.618,-70.955,266.688)
C3': (263.767,-65.622,265.221)
C1': (261.551,-65.780,264.442)
C5': (264.018,-68.111,265.579)
O4': (262.072,-67.072,264.598)
C8: (260.284,-66.294,266.595)
O2': (263.124,-64.596,263.175)
C6: (257.757,-63.956,266.914)
C5: (258.820,-64.806,266.637)
C4: (259.562,-64.576,265.498)
P: (264.565,-70.639,265.590)
C4': (263.513,-67.002,264.708)
C2': (262.717,-64.809,264.496)
C2: (258.349,-62.840,264.972)
N1: (257.540,-62.948,266.034)
N3: (259.377,-63.597,264.609)
N6: (257.002,-64.110,268.007)
N7: (259.280,-65.888,267.336)
N9: (260.532,-65.537,265.483)
O5': (264.120,-69.321,264.860)
O3': (265.091,-65.201,264.965)
Image (generated by PyMOL):