Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0414:0182
Extra
PDB:
ATOM 1 O3' U A 413 73.063 83.673 14.445 1.00 61.02 O
ATOM 2 P G A 414 73.489 84.928 13.536 1.00 61.29 P
ATOM 3 OP1 G A 414 72.313 85.257 12.682 1.00 62.29 O
ATOM 4 OP2 G A 414 74.813 84.665 12.908 1.00 59.23 O
ATOM 5 O5' G A 414 73.665 86.117 14.580 1.00 61.44 O
ATOM 6 C5' G A 414 72.523 86.644 15.288 1.00 59.37 C
ATOM 7 C4' G A 414 72.952 87.704 16.276 1.00 57.33 C
ATOM 8 O4' G A 414 73.954 87.153 17.167 1.00 56.89 O
ATOM 9 C3' G A 414 73.630 88.935 15.707 1.00 55.59 C
ATOM 10 O3' G A 414 72.665 89.847 15.210 1.00 55.79 O
ATOM 11 C2' G A 414 74.367 89.473 16.928 1.00 55.75 C
ATOM 12 O2' G A 414 73.525 90.119 17.864 1.00 55.03 O
ATOM 13 C1' G A 414 74.840 88.176 17.573 1.00 54.67 C
ATOM 14 N9 G A 414 76.188 87.799 17.179 1.00 54.44 N
ATOM 15 C8 G A 414 76.564 86.753 16.373 1.00 55.05 C
ATOM 16 N7 G A 414 77.857 86.649 16.244 1.00 55.66 N
ATOM 17 C5 G A 414 78.359 87.699 16.998 1.00 55.07 C
ATOM 18 C6 G A 414 79.693 88.099 17.236 1.00 55.38 C
ATOM 19 O6 G A 414 80.732 87.594 16.810 1.00 56.77 O
ATOM 20 N1 G A 414 79.751 89.214 18.064 1.00 54.76 N
ATOM 21 C2 G A 414 78.663 89.864 18.589 1.00 54.60 C
ATOM 22 N2 G A 414 78.921 90.917 19.363 1.00 55.60 N
ATOM 23 N3 G A 414 77.415 89.505 18.370 1.00 54.51 N
ATOM 24 C4 G A 414 77.339 88.421 17.572 1.00 54.67 C
ATOM 25 P C A 415 73.027 90.781 13.956 1.00 55.51 P
ATOM 26 OP1 C A 415 71.829 91.619 13.664 1.00 53.32 O
ATOM 27 OP2 C A 415 73.603 89.919 12.891 1.00 57.02 O
ATOM 28 O5' C A 415 74.178 91.727 14.508 1.00 53.42 O
TER
ATOM 1 O3' A B 181 77.862 94.972 19.999 1.00 57.26 O
ATOM 2 P A B 182 77.406 93.891 21.103 1.00 58.04 P
ATOM 3 OP1 A B 182 78.303 93.968 22.289 1.00 55.77 O
ATOM 4 OP2 A B 182 77.234 92.591 20.406 1.00 57.70 O
ATOM 5 O5' A B 182 75.958 94.398 21.529 1.00 55.02 O
ATOM 6 C5' A B 182 75.794 95.633 22.233 1.00 52.59 C
ATOM 7 C4' A B 182 74.331 95.922 22.434 1.00 53.07 C
ATOM 8 O4' A B 182 73.698 96.117 21.144 1.00 53.32 O
ATOM 9 C3' A B 182 73.525 94.798 23.058 1.00 52.23 C
ATOM 10 O3' A B 182 73.677 94.735 24.460 1.00 50.47 O
ATOM 11 C2' A B 182 72.114 95.142 22.608 1.00 53.19 C
ATOM 12 O2' A B 182 71.543 96.216 23.326 1.00 52.76 O
ATOM 13 C1' A B 182 72.377 95.586 21.170 1.00 53.21 C
ATOM 14 N9 A B 182 72.332 94.447 20.254 1.00 53.48 N
ATOM 15 C8 A B 182 73.396 93.768 19.709 1.00 53.90 C
ATOM 16 N7 A B 182 73.045 92.768 18.939 1.00 55.36 N
ATOM 17 C5 A B 182 71.656 92.789 18.974 1.00 55.78 C
ATOM 18 C6 A B 182 70.674 91.969 18.368 1.00 56.24 C
ATOM 19 N6 A B 182 70.957 90.933 17.565 1.00 54.45 N
ATOM 20 N1 A B 182 69.374 92.257 18.621 1.00 55.57 N
ATOM 21 C2 A B 182 69.092 93.293 19.422 1.00 54.89 C
ATOM 22 N3 A B 182 69.924 94.134 20.045 1.00 55.00 N
ATOM 23 C4 A B 182 71.204 93.822 19.778 1.00 54.35 C
ATOM 24 P C B 183 73.920 93.314 25.156 1.00 52.41 P
ATOM 25 OP1 C B 183 74.329 93.598 26.549 1.00 52.16 O
ATOM 26 OP2 C B 183 74.797 92.483 24.294 1.00 52.85 O
ATOM 27 O5' C B 183 72.477 92.637 25.138 1.00 53.85 O
TER
ATOM 2 P G A 414 73.489 84.928 13.536 1.00 61.29 P
ATOM 3 OP1 G A 414 72.313 85.257 12.682 1.00 62.29 O
ATOM 4 OP2 G A 414 74.813 84.665 12.908 1.00 59.23 O
ATOM 5 O5' G A 414 73.665 86.117 14.580 1.00 61.44 O
ATOM 6 C5' G A 414 72.523 86.644 15.288 1.00 59.37 C
ATOM 7 C4' G A 414 72.952 87.704 16.276 1.00 57.33 C
ATOM 8 O4' G A 414 73.954 87.153 17.167 1.00 56.89 O
ATOM 9 C3' G A 414 73.630 88.935 15.707 1.00 55.59 C
ATOM 10 O3' G A 414 72.665 89.847 15.210 1.00 55.79 O
ATOM 11 C2' G A 414 74.367 89.473 16.928 1.00 55.75 C
ATOM 12 O2' G A 414 73.525 90.119 17.864 1.00 55.03 O
ATOM 13 C1' G A 414 74.840 88.176 17.573 1.00 54.67 C
ATOM 14 N9 G A 414 76.188 87.799 17.179 1.00 54.44 N
ATOM 15 C8 G A 414 76.564 86.753 16.373 1.00 55.05 C
ATOM 16 N7 G A 414 77.857 86.649 16.244 1.00 55.66 N
ATOM 17 C5 G A 414 78.359 87.699 16.998 1.00 55.07 C
ATOM 18 C6 G A 414 79.693 88.099 17.236 1.00 55.38 C
ATOM 19 O6 G A 414 80.732 87.594 16.810 1.00 56.77 O
ATOM 20 N1 G A 414 79.751 89.214 18.064 1.00 54.76 N
ATOM 21 C2 G A 414 78.663 89.864 18.589 1.00 54.60 C
ATOM 22 N2 G A 414 78.921 90.917 19.363 1.00 55.60 N
ATOM 23 N3 G A 414 77.415 89.505 18.370 1.00 54.51 N
ATOM 24 C4 G A 414 77.339 88.421 17.572 1.00 54.67 C
ATOM 25 P C A 415 73.027 90.781 13.956 1.00 55.51 P
ATOM 26 OP1 C A 415 71.829 91.619 13.664 1.00 53.32 O
ATOM 27 OP2 C A 415 73.603 89.919 12.891 1.00 57.02 O
ATOM 28 O5' C A 415 74.178 91.727 14.508 1.00 53.42 O
TER
ATOM 1 O3' A B 181 77.862 94.972 19.999 1.00 57.26 O
ATOM 2 P A B 182 77.406 93.891 21.103 1.00 58.04 P
ATOM 3 OP1 A B 182 78.303 93.968 22.289 1.00 55.77 O
ATOM 4 OP2 A B 182 77.234 92.591 20.406 1.00 57.70 O
ATOM 5 O5' A B 182 75.958 94.398 21.529 1.00 55.02 O
ATOM 6 C5' A B 182 75.794 95.633 22.233 1.00 52.59 C
ATOM 7 C4' A B 182 74.331 95.922 22.434 1.00 53.07 C
ATOM 8 O4' A B 182 73.698 96.117 21.144 1.00 53.32 O
ATOM 9 C3' A B 182 73.525 94.798 23.058 1.00 52.23 C
ATOM 10 O3' A B 182 73.677 94.735 24.460 1.00 50.47 O
ATOM 11 C2' A B 182 72.114 95.142 22.608 1.00 53.19 C
ATOM 12 O2' A B 182 71.543 96.216 23.326 1.00 52.76 O
ATOM 13 C1' A B 182 72.377 95.586 21.170 1.00 53.21 C
ATOM 14 N9 A B 182 72.332 94.447 20.254 1.00 53.48 N
ATOM 15 C8 A B 182 73.396 93.768 19.709 1.00 53.90 C
ATOM 16 N7 A B 182 73.045 92.768 18.939 1.00 55.36 N
ATOM 17 C5 A B 182 71.656 92.789 18.974 1.00 55.78 C
ATOM 18 C6 A B 182 70.674 91.969 18.368 1.00 56.24 C
ATOM 19 N6 A B 182 70.957 90.933 17.565 1.00 54.45 N
ATOM 20 N1 A B 182 69.374 92.257 18.621 1.00 55.57 N
ATOM 21 C2 A B 182 69.092 93.293 19.422 1.00 54.89 C
ATOM 22 N3 A B 182 69.924 94.134 20.045 1.00 55.00 N
ATOM 23 C4 A B 182 71.204 93.822 19.778 1.00 54.35 C
ATOM 24 P C B 183 73.920 93.314 25.156 1.00 52.41 P
ATOM 25 OP1 C B 183 74.329 93.598 26.549 1.00 52.16 O
ATOM 26 OP2 C B 183 74.797 92.483 24.294 1.00 52.85 O
ATOM 27 O5' C B 183 72.477 92.637 25.138 1.00 53.85 O
TER
Atoms:
OP1: (72.313,85.257,12.682)
OP2: (74.813,84.665,12.908)
C3': (73.630,88.935,15.707)
C1': (74.840,88.176,17.573)
C5': (72.523,86.644,15.288)
O6: (80.732,87.594,16.810)
O4': (73.954,87.153,17.167)
C8: (76.564,86.753,16.373)
C2: (78.663,89.864,18.589)
C6: (79.693,88.099,17.236)
C5: (78.359,87.699,16.998)
C4: (77.339,88.421,17.572)
P: (73.489,84.928,13.536)
C4': (72.952,87.704,16.276)
C2': (74.367,89.473,16.928)
O2': (73.525,90.119,17.864)
N1: (79.751,89.214,18.064)
N2: (78.921,90.917,19.363)
N3: (77.415,89.505,18.370)
N7: (77.857,86.649,16.244)
N9: (76.188,87.799,17.179)
O5': (73.665,86.117,14.580)
O3': (72.665,89.847,15.210)
OP2: (74.813,84.665,12.908)
C3': (73.630,88.935,15.707)
C1': (74.840,88.176,17.573)
C5': (72.523,86.644,15.288)
O6: (80.732,87.594,16.810)
O4': (73.954,87.153,17.167)
C8: (76.564,86.753,16.373)
C2: (78.663,89.864,18.589)
C6: (79.693,88.099,17.236)
C5: (78.359,87.699,16.998)
C4: (77.339,88.421,17.572)
P: (73.489,84.928,13.536)
C4': (72.952,87.704,16.276)
C2': (74.367,89.473,16.928)
O2': (73.525,90.119,17.864)
N1: (79.751,89.214,18.064)
N2: (78.921,90.917,19.363)
N3: (77.415,89.505,18.370)
N7: (77.857,86.649,16.244)
N9: (76.188,87.799,17.179)
O5': (73.665,86.117,14.580)
O3': (72.665,89.847,15.210)
OP1: (78.303,93.968,22.289)
OP2: (77.234,92.591,20.406)
C3': (73.525,94.798,23.058)
C1': (72.377,95.586,21.170)
C5': (75.794,95.633,22.233)
O4': (73.698,96.117,21.144)
C8: (73.396,93.768,19.709)
O2': (71.543,96.216,23.326)
C6: (70.674,91.969,18.368)
C5: (71.656,92.789,18.974)
C4: (71.204,93.822,19.778)
P: (77.406,93.891,21.103)
C4': (74.331,95.922,22.434)
C2': (72.114,95.142,22.608)
C2: (69.092,93.293,19.422)
N1: (69.374,92.257,18.621)
N3: (69.924,94.134,20.045)
N6: (70.957,90.933,17.565)
N7: (73.045,92.768,18.939)
N9: (72.332,94.447,20.254)
O5': (75.958,94.398,21.529)
O3': (73.677,94.735,24.460)
OP2: (77.234,92.591,20.406)
C3': (73.525,94.798,23.058)
C1': (72.377,95.586,21.170)
C5': (75.794,95.633,22.233)
O4': (73.698,96.117,21.144)
C8: (73.396,93.768,19.709)
O2': (71.543,96.216,23.326)
C6: (70.674,91.969,18.368)
C5: (71.656,92.789,18.974)
C4: (71.204,93.822,19.778)
P: (77.406,93.891,21.103)
C4': (74.331,95.922,22.434)
C2': (72.114,95.142,22.608)
C2: (69.092,93.293,19.422)
N1: (69.374,92.257,18.621)
N3: (69.924,94.134,20.045)
N6: (70.957,90.933,17.565)
N7: (73.045,92.768,18.939)
N9: (72.332,94.447,20.254)
O5': (75.958,94.398,21.529)
O3': (73.677,94.735,24.460)
Image (generated by PyMOL):