Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11180:11189
Extra
PDB:
ATOM 1 O3' U A1179 -14.360 -3.013 -32.961 1.00212.74 O
ATOM 2 P G A1180 -15.271 -1.684 -33.100 1.00233.37 P
ATOM 3 OP1 G A1180 -16.024 -1.790 -34.373 1.00233.96 O
ATOM 4 OP2 G A1180 -14.382 -0.514 -32.899 1.00232.56 O
ATOM 5 O5' G A1180 -16.266 -1.823 -31.865 1.00234.17 O
ATOM 6 C5' G A1180 -16.871 -3.077 -31.559 1.00234.77 C
ATOM 7 C4' G A1180 -16.631 -3.488 -30.129 1.00234.63 C
ATOM 8 O4' G A1180 -17.562 -2.766 -29.283 1.00235.30 O
ATOM 9 C3' G A1180 -16.867 -4.969 -29.830 1.00234.96 C
ATOM 10 O3' G A1180 -16.074 -5.349 -28.695 1.00234.38 O
ATOM 11 C2' G A1180 -18.346 -4.974 -29.453 1.00236.13 C
ATOM 12 O2' G A1180 -18.761 -6.088 -28.694 1.00236.57 O
ATOM 13 C1' G A1180 -18.450 -3.677 -28.659 1.00236.09 C
ATOM 14 N9 G A1180 -19.785 -3.076 -28.649 1.00237.09 N
ATOM 15 C8 G A1180 -20.672 -2.877 -29.680 1.00237.76 C
ATOM 16 N7 G A1180 -21.775 -2.288 -29.284 1.00238.58 N
ATOM 17 C5 G A1180 -21.603 -2.081 -27.915 1.00238.44 C
ATOM 18 C6 G A1180 -22.436 -1.490 -26.916 1.00239.05 C
ATOM 19 O6 G A1180 -23.567 -0.997 -27.030 1.00239.90 O
ATOM 20 N1 G A1180 -21.831 -1.503 -25.657 1.00238.59 N
ATOM 21 C2 G A1180 -20.589 -2.022 -25.389 1.00237.66 C
ATOM 22 N2 G A1180 -20.133 -1.955 -24.135 1.00237.30 N
ATOM 23 N3 G A1180 -19.823 -2.568 -26.305 1.00237.09 N
ATOM 24 C4 G A1180 -20.377 -2.563 -27.527 1.00237.52 C
ATOM 25 P G A1181 -15.691 -6.895 -28.418 1.00240.19 P
ATOM 26 OP1 G A1181 -15.956 -7.157 -26.979 1.00240.44 O
ATOM 27 OP2 G A1181 -14.315 -7.105 -28.933 1.00239.12 O
ATOM 28 O5' G A1181 -16.736 -7.700 -29.317 1.00241.09 O
TER
ATOM 1 O3' A B1188 -18.945 -4.054 -21.324 1.00319.71 O
ATOM 2 P A B1189 -18.743 -5.352 -22.253 1.00246.69 P
ATOM 3 OP1 A B1189 -20.086 -5.927 -22.494 1.00247.81 O
ATOM 4 OP2 A B1189 -17.715 -6.203 -21.604 1.00245.97 O
ATOM 5 O5' A B1189 -18.166 -4.735 -23.611 1.00246.16 O
ATOM 6 C5' A B1189 -17.221 -3.661 -23.599 1.00245.31 C
ATOM 7 C4' A B1189 -16.491 -3.542 -24.923 1.00244.71 C
ATOM 8 O4' A B1189 -17.299 -2.774 -25.857 1.00245.27 O
ATOM 9 C3' A B1189 -15.130 -2.843 -24.875 1.00243.57 C
ATOM 10 O3' A B1189 -14.266 -3.455 -25.847 1.00242.94 O
ATOM 11 C2' A B1189 -15.476 -1.417 -25.309 1.00243.71 C
ATOM 12 O2' A B1189 -14.393 -0.673 -25.830 1.00242.78 O
ATOM 13 C1' A B1189 -16.541 -1.687 -26.361 1.00244.56 C
ATOM 14 N9 A B1189 -17.450 -0.561 -26.616 1.00245.17 N
ATOM 15 C8 A B1189 -18.348 0.024 -25.753 1.00245.83 C
ATOM 16 N7 A B1189 -19.040 1.002 -26.291 1.00246.28 N
ATOM 17 C5 A B1189 -18.568 1.078 -27.599 1.00245.89 C
ATOM 18 C6 A B1189 -18.888 1.917 -28.690 1.00246.06 C
ATOM 19 N6 A B1189 -19.804 2.888 -28.646 1.00246.69 N
ATOM 20 N1 A B1189 -18.227 1.726 -29.852 1.00245.54 N
ATOM 21 C2 A B1189 -17.307 0.758 -29.916 1.00244.91 C
ATOM 22 N3 A B1189 -16.919 -0.089 -28.964 1.00244.69 N
ATOM 23 C4 A B1189 -17.593 0.118 -27.814 1.00245.21 C
ATOM 24 P G B1190 -12.675 -3.190 -25.830 1.00276.13 P
ATOM 25 OP1 G B1190 -12.450 -1.922 -25.106 1.00275.84 O
ATOM 26 OP2 G B1190 -12.203 -3.297 -27.235 1.00275.75 O
ATOM 27 O5' G B1190 -12.103 -4.414 -24.980 1.00275.80 O
TER
ATOM 2 P G A1180 -15.271 -1.684 -33.100 1.00233.37 P
ATOM 3 OP1 G A1180 -16.024 -1.790 -34.373 1.00233.96 O
ATOM 4 OP2 G A1180 -14.382 -0.514 -32.899 1.00232.56 O
ATOM 5 O5' G A1180 -16.266 -1.823 -31.865 1.00234.17 O
ATOM 6 C5' G A1180 -16.871 -3.077 -31.559 1.00234.77 C
ATOM 7 C4' G A1180 -16.631 -3.488 -30.129 1.00234.63 C
ATOM 8 O4' G A1180 -17.562 -2.766 -29.283 1.00235.30 O
ATOM 9 C3' G A1180 -16.867 -4.969 -29.830 1.00234.96 C
ATOM 10 O3' G A1180 -16.074 -5.349 -28.695 1.00234.38 O
ATOM 11 C2' G A1180 -18.346 -4.974 -29.453 1.00236.13 C
ATOM 12 O2' G A1180 -18.761 -6.088 -28.694 1.00236.57 O
ATOM 13 C1' G A1180 -18.450 -3.677 -28.659 1.00236.09 C
ATOM 14 N9 G A1180 -19.785 -3.076 -28.649 1.00237.09 N
ATOM 15 C8 G A1180 -20.672 -2.877 -29.680 1.00237.76 C
ATOM 16 N7 G A1180 -21.775 -2.288 -29.284 1.00238.58 N
ATOM 17 C5 G A1180 -21.603 -2.081 -27.915 1.00238.44 C
ATOM 18 C6 G A1180 -22.436 -1.490 -26.916 1.00239.05 C
ATOM 19 O6 G A1180 -23.567 -0.997 -27.030 1.00239.90 O
ATOM 20 N1 G A1180 -21.831 -1.503 -25.657 1.00238.59 N
ATOM 21 C2 G A1180 -20.589 -2.022 -25.389 1.00237.66 C
ATOM 22 N2 G A1180 -20.133 -1.955 -24.135 1.00237.30 N
ATOM 23 N3 G A1180 -19.823 -2.568 -26.305 1.00237.09 N
ATOM 24 C4 G A1180 -20.377 -2.563 -27.527 1.00237.52 C
ATOM 25 P G A1181 -15.691 -6.895 -28.418 1.00240.19 P
ATOM 26 OP1 G A1181 -15.956 -7.157 -26.979 1.00240.44 O
ATOM 27 OP2 G A1181 -14.315 -7.105 -28.933 1.00239.12 O
ATOM 28 O5' G A1181 -16.736 -7.700 -29.317 1.00241.09 O
TER
ATOM 1 O3' A B1188 -18.945 -4.054 -21.324 1.00319.71 O
ATOM 2 P A B1189 -18.743 -5.352 -22.253 1.00246.69 P
ATOM 3 OP1 A B1189 -20.086 -5.927 -22.494 1.00247.81 O
ATOM 4 OP2 A B1189 -17.715 -6.203 -21.604 1.00245.97 O
ATOM 5 O5' A B1189 -18.166 -4.735 -23.611 1.00246.16 O
ATOM 6 C5' A B1189 -17.221 -3.661 -23.599 1.00245.31 C
ATOM 7 C4' A B1189 -16.491 -3.542 -24.923 1.00244.71 C
ATOM 8 O4' A B1189 -17.299 -2.774 -25.857 1.00245.27 O
ATOM 9 C3' A B1189 -15.130 -2.843 -24.875 1.00243.57 C
ATOM 10 O3' A B1189 -14.266 -3.455 -25.847 1.00242.94 O
ATOM 11 C2' A B1189 -15.476 -1.417 -25.309 1.00243.71 C
ATOM 12 O2' A B1189 -14.393 -0.673 -25.830 1.00242.78 O
ATOM 13 C1' A B1189 -16.541 -1.687 -26.361 1.00244.56 C
ATOM 14 N9 A B1189 -17.450 -0.561 -26.616 1.00245.17 N
ATOM 15 C8 A B1189 -18.348 0.024 -25.753 1.00245.83 C
ATOM 16 N7 A B1189 -19.040 1.002 -26.291 1.00246.28 N
ATOM 17 C5 A B1189 -18.568 1.078 -27.599 1.00245.89 C
ATOM 18 C6 A B1189 -18.888 1.917 -28.690 1.00246.06 C
ATOM 19 N6 A B1189 -19.804 2.888 -28.646 1.00246.69 N
ATOM 20 N1 A B1189 -18.227 1.726 -29.852 1.00245.54 N
ATOM 21 C2 A B1189 -17.307 0.758 -29.916 1.00244.91 C
ATOM 22 N3 A B1189 -16.919 -0.089 -28.964 1.00244.69 N
ATOM 23 C4 A B1189 -17.593 0.118 -27.814 1.00245.21 C
ATOM 24 P G B1190 -12.675 -3.190 -25.830 1.00276.13 P
ATOM 25 OP1 G B1190 -12.450 -1.922 -25.106 1.00275.84 O
ATOM 26 OP2 G B1190 -12.203 -3.297 -27.235 1.00275.75 O
ATOM 27 O5' G B1190 -12.103 -4.414 -24.980 1.00275.80 O
TER
Atoms:
OP1: (-16.024,-1.790,-34.373)
OP2: (-14.382,-0.514,-32.899)
C3': (-16.867,-4.969,-29.830)
C1': (-18.450,-3.677,-28.659)
C5': (-16.871,-3.077,-31.559)
O6: (-23.567,-0.997,-27.030)
O4': (-17.562,-2.766,-29.283)
C8: (-20.672,-2.877,-29.680)
C2: (-20.589,-2.022,-25.389)
C6: (-22.436,-1.490,-26.916)
C5: (-21.603,-2.081,-27.915)
C4: (-20.377,-2.563,-27.527)
P: (-15.271,-1.684,-33.100)
C4': (-16.631,-3.488,-30.129)
C2': (-18.346,-4.974,-29.453)
O2': (-18.761,-6.088,-28.694)
N1: (-21.831,-1.503,-25.657)
N2: (-20.133,-1.955,-24.135)
N3: (-19.823,-2.568,-26.305)
N7: (-21.775,-2.288,-29.284)
N9: (-19.785,-3.076,-28.649)
O5': (-16.266,-1.823,-31.865)
O3': (-16.074,-5.349,-28.695)
OP2: (-14.382,-0.514,-32.899)
C3': (-16.867,-4.969,-29.830)
C1': (-18.450,-3.677,-28.659)
C5': (-16.871,-3.077,-31.559)
O6: (-23.567,-0.997,-27.030)
O4': (-17.562,-2.766,-29.283)
C8: (-20.672,-2.877,-29.680)
C2: (-20.589,-2.022,-25.389)
C6: (-22.436,-1.490,-26.916)
C5: (-21.603,-2.081,-27.915)
C4: (-20.377,-2.563,-27.527)
P: (-15.271,-1.684,-33.100)
C4': (-16.631,-3.488,-30.129)
C2': (-18.346,-4.974,-29.453)
O2': (-18.761,-6.088,-28.694)
N1: (-21.831,-1.503,-25.657)
N2: (-20.133,-1.955,-24.135)
N3: (-19.823,-2.568,-26.305)
N7: (-21.775,-2.288,-29.284)
N9: (-19.785,-3.076,-28.649)
O5': (-16.266,-1.823,-31.865)
O3': (-16.074,-5.349,-28.695)
OP1: (-20.086,-5.927,-22.494)
OP2: (-17.715,-6.203,-21.604)
C3': (-15.130,-2.843,-24.875)
C1': (-16.541,-1.687,-26.361)
C5': (-17.221,-3.661,-23.599)
O4': (-17.299,-2.774,-25.857)
C8: (-18.348,0.024,-25.753)
O2': (-14.393,-0.673,-25.830)
C6: (-18.888,1.917,-28.690)
C5: (-18.568,1.078,-27.599)
C4: (-17.593,0.118,-27.814)
P: (-18.743,-5.352,-22.253)
C4': (-16.491,-3.542,-24.923)
C2': (-15.476,-1.417,-25.309)
C2: (-17.307,0.758,-29.916)
N1: (-18.227,1.726,-29.852)
N3: (-16.919,-0.089,-28.964)
N6: (-19.804,2.888,-28.646)
N7: (-19.040,1.002,-26.291)
N9: (-17.450,-0.561,-26.616)
O5': (-18.166,-4.735,-23.611)
O3': (-14.266,-3.455,-25.847)
OP2: (-17.715,-6.203,-21.604)
C3': (-15.130,-2.843,-24.875)
C1': (-16.541,-1.687,-26.361)
C5': (-17.221,-3.661,-23.599)
O4': (-17.299,-2.774,-25.857)
C8: (-18.348,0.024,-25.753)
O2': (-14.393,-0.673,-25.830)
C6: (-18.888,1.917,-28.690)
C5: (-18.568,1.078,-27.599)
C4: (-17.593,0.118,-27.814)
P: (-18.743,-5.352,-22.253)
C4': (-16.491,-3.542,-24.923)
C2': (-15.476,-1.417,-25.309)
C2: (-17.307,0.758,-29.916)
N1: (-18.227,1.726,-29.852)
N3: (-16.919,-0.089,-28.964)
N6: (-19.804,2.888,-28.646)
N7: (-19.040,1.002,-26.291)
N9: (-17.450,-0.561,-26.616)
O5': (-18.166,-4.735,-23.611)
O3': (-14.266,-3.455,-25.847)
Image (generated by PyMOL):