Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A321:A342
Extra
PDB:
ATOM 1 O3' G A 320 43.449-118.663 -45.781 1.00 50.47 O
ATOM 2 P G A 321 44.214-119.501 -46.929 1.00 52.86 P
ATOM 3 OP1 G A 321 43.372-120.640 -47.359 1.00 58.70 O
ATOM 4 OP2 G A 321 45.586-119.773 -46.425 1.00 61.03 O
ATOM 5 O5' G A 321 44.283-118.479 -48.152 1.00 55.21 O
ATOM 6 C5' G A 321 43.194-117.605 -48.454 1.00 57.86 C
ATOM 7 C4' G A 321 43.719-116.293 -48.979 1.00 56.83 C
ATOM 8 O4' G A 321 44.375-115.574 -47.909 1.00 57.86 O
ATOM 9 C3' G A 321 44.746-116.419 -50.090 1.00 57.71 C
ATOM 10 O3' G A 321 44.069-116.490 -51.349 1.00 63.48 O
ATOM 11 C2' G A 321 45.581-115.151 -49.931 1.00 56.67 C
ATOM 12 O2' G A 321 45.041-114.035 -50.602 1.00 58.10 O
ATOM 13 C1' G A 321 45.510-114.895 -48.418 1.00 60.22 C
ATOM 14 N9 G A 321 46.679-115.368 -47.682 1.00 65.00 N
ATOM 15 C8 G A 321 46.892-116.656 -47.247 1.00 65.78 C
ATOM 16 N7 G A 321 48.024-116.807 -46.616 1.00 65.38 N
ATOM 17 C5 G A 321 48.603-115.546 -46.631 1.00 66.54 C
ATOM 18 C6 G A 321 49.850-115.104 -46.114 1.00 69.07 C
ATOM 19 O6 G A 321 50.717-115.770 -45.515 1.00 72.10 O
ATOM 20 N1 G A 321 50.050-113.746 -46.351 1.00 69.88 N
ATOM 21 C2 G A 321 49.165-112.916 -47.001 1.00 66.97 C
ATOM 22 N2 G A 321 49.530-111.627 -47.102 1.00 64.49 N
ATOM 23 N3 G A 321 48.004-113.319 -47.505 1.00 66.56 N
ATOM 24 C4 G A 321 47.787-114.637 -47.283 1.00 67.54 C
ATOM 25 P A A 322 44.733-117.253 -52.605 1.00 67.62 P
ATOM 26 OP1 A A 322 43.830-117.166 -53.769 1.00 68.93 O
ATOM 27 OP2 A A 322 45.267-118.576 -52.197 1.00 60.03 O
ATOM 28 O5' A A 322 45.971-116.343 -52.971 1.00 59.50 O
TER
ATOM 1 O3' G B 341 48.190-108.932 -50.106 1.00 59.19 O
ATOM 2 P A B 342 48.864-108.439 -48.717 1.00 50.52 P
ATOM 3 OP1 A B 342 48.123-108.970 -47.551 1.00 61.93 O
ATOM 4 OP2 A B 342 49.121-106.984 -48.851 1.00 51.45 O
ATOM 5 O5' A B 342 50.294-109.104 -48.730 1.00 58.75 O
ATOM 6 C5' A B 342 50.888-109.394 -49.967 1.00 60.19 C
ATOM 7 C4' A B 342 52.318-109.767 -49.783 1.00 58.41 C
ATOM 8 O4' A B 342 52.417-111.043 -49.099 1.00 54.28 O
ATOM 9 C3' A B 342 52.986-109.931 -51.124 1.00 58.01 C
ATOM 10 O3' A B 342 54.291-109.384 -51.068 1.00 57.35 O
ATOM 11 C2' A B 342 52.901-111.420 -51.407 1.00 55.22 C
ATOM 12 O2' A B 342 53.999-111.869 -52.167 1.00 59.22 O
ATOM 13 C1' A B 342 52.786-112.054 -50.010 1.00 56.88 C
ATOM 14 N9 A B 342 51.715-113.055 -49.992 1.00 70.13 N
ATOM 15 C8 A B 342 50.510-112.959 -50.663 1.00 69.85 C
ATOM 16 N7 A B 342 49.757-114.022 -50.561 1.00 64.92 N
ATOM 17 C5 A B 342 50.496-114.877 -49.765 1.00 61.30 C
ATOM 18 C6 A B 342 50.259-116.173 -49.333 1.00 63.50 C
ATOM 19 N6 A B 342 49.180-116.880 -49.707 1.00 64.41 N
ATOM 20 N1 A B 342 51.175-116.744 -48.521 1.00 67.96 N
ATOM 21 C2 A B 342 52.272-116.044 -48.200 1.00 66.67 C
ATOM 22 N3 A B 342 52.628-114.819 -48.576 1.00 62.02 N
ATOM 23 C4 A B 342 51.688-114.282 -49.369 1.00 63.81 C
ATOM 24 P A B 343 54.666-108.213 -52.090 1.00 58.58 P
ATOM 25 OP1 A B 343 55.846-107.477 -51.580 1.00 47.50 O
ATOM 26 OP2 A B 343 53.408-107.471 -52.310 1.00 62.06 O
ATOM 27 O5' A B 343 55.036-109.042 -53.406 1.00 49.40 O
TER
ATOM 2 P G A 321 44.214-119.501 -46.929 1.00 52.86 P
ATOM 3 OP1 G A 321 43.372-120.640 -47.359 1.00 58.70 O
ATOM 4 OP2 G A 321 45.586-119.773 -46.425 1.00 61.03 O
ATOM 5 O5' G A 321 44.283-118.479 -48.152 1.00 55.21 O
ATOM 6 C5' G A 321 43.194-117.605 -48.454 1.00 57.86 C
ATOM 7 C4' G A 321 43.719-116.293 -48.979 1.00 56.83 C
ATOM 8 O4' G A 321 44.375-115.574 -47.909 1.00 57.86 O
ATOM 9 C3' G A 321 44.746-116.419 -50.090 1.00 57.71 C
ATOM 10 O3' G A 321 44.069-116.490 -51.349 1.00 63.48 O
ATOM 11 C2' G A 321 45.581-115.151 -49.931 1.00 56.67 C
ATOM 12 O2' G A 321 45.041-114.035 -50.602 1.00 58.10 O
ATOM 13 C1' G A 321 45.510-114.895 -48.418 1.00 60.22 C
ATOM 14 N9 G A 321 46.679-115.368 -47.682 1.00 65.00 N
ATOM 15 C8 G A 321 46.892-116.656 -47.247 1.00 65.78 C
ATOM 16 N7 G A 321 48.024-116.807 -46.616 1.00 65.38 N
ATOM 17 C5 G A 321 48.603-115.546 -46.631 1.00 66.54 C
ATOM 18 C6 G A 321 49.850-115.104 -46.114 1.00 69.07 C
ATOM 19 O6 G A 321 50.717-115.770 -45.515 1.00 72.10 O
ATOM 20 N1 G A 321 50.050-113.746 -46.351 1.00 69.88 N
ATOM 21 C2 G A 321 49.165-112.916 -47.001 1.00 66.97 C
ATOM 22 N2 G A 321 49.530-111.627 -47.102 1.00 64.49 N
ATOM 23 N3 G A 321 48.004-113.319 -47.505 1.00 66.56 N
ATOM 24 C4 G A 321 47.787-114.637 -47.283 1.00 67.54 C
ATOM 25 P A A 322 44.733-117.253 -52.605 1.00 67.62 P
ATOM 26 OP1 A A 322 43.830-117.166 -53.769 1.00 68.93 O
ATOM 27 OP2 A A 322 45.267-118.576 -52.197 1.00 60.03 O
ATOM 28 O5' A A 322 45.971-116.343 -52.971 1.00 59.50 O
TER
ATOM 1 O3' G B 341 48.190-108.932 -50.106 1.00 59.19 O
ATOM 2 P A B 342 48.864-108.439 -48.717 1.00 50.52 P
ATOM 3 OP1 A B 342 48.123-108.970 -47.551 1.00 61.93 O
ATOM 4 OP2 A B 342 49.121-106.984 -48.851 1.00 51.45 O
ATOM 5 O5' A B 342 50.294-109.104 -48.730 1.00 58.75 O
ATOM 6 C5' A B 342 50.888-109.394 -49.967 1.00 60.19 C
ATOM 7 C4' A B 342 52.318-109.767 -49.783 1.00 58.41 C
ATOM 8 O4' A B 342 52.417-111.043 -49.099 1.00 54.28 O
ATOM 9 C3' A B 342 52.986-109.931 -51.124 1.00 58.01 C
ATOM 10 O3' A B 342 54.291-109.384 -51.068 1.00 57.35 O
ATOM 11 C2' A B 342 52.901-111.420 -51.407 1.00 55.22 C
ATOM 12 O2' A B 342 53.999-111.869 -52.167 1.00 59.22 O
ATOM 13 C1' A B 342 52.786-112.054 -50.010 1.00 56.88 C
ATOM 14 N9 A B 342 51.715-113.055 -49.992 1.00 70.13 N
ATOM 15 C8 A B 342 50.510-112.959 -50.663 1.00 69.85 C
ATOM 16 N7 A B 342 49.757-114.022 -50.561 1.00 64.92 N
ATOM 17 C5 A B 342 50.496-114.877 -49.765 1.00 61.30 C
ATOM 18 C6 A B 342 50.259-116.173 -49.333 1.00 63.50 C
ATOM 19 N6 A B 342 49.180-116.880 -49.707 1.00 64.41 N
ATOM 20 N1 A B 342 51.175-116.744 -48.521 1.00 67.96 N
ATOM 21 C2 A B 342 52.272-116.044 -48.200 1.00 66.67 C
ATOM 22 N3 A B 342 52.628-114.819 -48.576 1.00 62.02 N
ATOM 23 C4 A B 342 51.688-114.282 -49.369 1.00 63.81 C
ATOM 24 P A B 343 54.666-108.213 -52.090 1.00 58.58 P
ATOM 25 OP1 A B 343 55.846-107.477 -51.580 1.00 47.50 O
ATOM 26 OP2 A B 343 53.408-107.471 -52.310 1.00 62.06 O
ATOM 27 O5' A B 343 55.036-109.042 -53.406 1.00 49.40 O
TER
Atoms:
OP1: (43.372,-120.640,-47.359)
OP2: (45.586,-119.773,-46.425)
C3': (44.746,-116.419,-50.090)
C1': (45.510,-114.895,-48.418)
C5': (43.194,-117.605,-48.454)
O6: (50.717,-115.770,-45.515)
O4': (44.375,-115.574,-47.909)
C8: (46.892,-116.656,-47.247)
C2: (49.165,-112.916,-47.001)
C6: (49.850,-115.104,-46.114)
C5: (48.603,-115.546,-46.631)
C4: (47.787,-114.637,-47.283)
P: (44.214,-119.501,-46.929)
C4': (43.719,-116.293,-48.979)
C2': (45.581,-115.151,-49.931)
O2': (45.041,-114.035,-50.602)
N1: (50.050,-113.746,-46.351)
N2: (49.530,-111.627,-47.102)
N3: (48.004,-113.319,-47.505)
N7: (48.024,-116.807,-46.616)
N9: (46.679,-115.368,-47.682)
O5': (44.283,-118.479,-48.152)
O3': (44.069,-116.490,-51.349)
OP2: (45.586,-119.773,-46.425)
C3': (44.746,-116.419,-50.090)
C1': (45.510,-114.895,-48.418)
C5': (43.194,-117.605,-48.454)
O6: (50.717,-115.770,-45.515)
O4': (44.375,-115.574,-47.909)
C8: (46.892,-116.656,-47.247)
C2: (49.165,-112.916,-47.001)
C6: (49.850,-115.104,-46.114)
C5: (48.603,-115.546,-46.631)
C4: (47.787,-114.637,-47.283)
P: (44.214,-119.501,-46.929)
C4': (43.719,-116.293,-48.979)
C2': (45.581,-115.151,-49.931)
O2': (45.041,-114.035,-50.602)
N1: (50.050,-113.746,-46.351)
N2: (49.530,-111.627,-47.102)
N3: (48.004,-113.319,-47.505)
N7: (48.024,-116.807,-46.616)
N9: (46.679,-115.368,-47.682)
O5': (44.283,-118.479,-48.152)
O3': (44.069,-116.490,-51.349)
OP1: (48.123,-108.970,-47.551)
OP2: (49.121,-106.984,-48.851)
C3': (52.986,-109.931,-51.124)
C1': (52.786,-112.054,-50.010)
C5': (50.888,-109.394,-49.967)
O4': (52.417,-111.043,-49.099)
C8: (50.510,-112.959,-50.663)
O2': (53.999,-111.869,-52.167)
C6: (50.259,-116.173,-49.333)
C5: (50.496,-114.877,-49.765)
C4: (51.688,-114.282,-49.369)
P: (48.864,-108.439,-48.717)
C4': (52.318,-109.767,-49.783)
C2': (52.901,-111.420,-51.407)
C2: (52.272,-116.044,-48.200)
N1: (51.175,-116.744,-48.521)
N3: (52.628,-114.819,-48.576)
N6: (49.180,-116.880,-49.707)
N7: (49.757,-114.022,-50.561)
N9: (51.715,-113.055,-49.992)
O5': (50.294,-109.104,-48.730)
O3': (54.291,-109.384,-51.068)
OP2: (49.121,-106.984,-48.851)
C3': (52.986,-109.931,-51.124)
C1': (52.786,-112.054,-50.010)
C5': (50.888,-109.394,-49.967)
O4': (52.417,-111.043,-49.099)
C8: (50.510,-112.959,-50.663)
O2': (53.999,-111.869,-52.167)
C6: (50.259,-116.173,-49.333)
C5: (50.496,-114.877,-49.765)
C4: (51.688,-114.282,-49.369)
P: (48.864,-108.439,-48.717)
C4': (52.318,-109.767,-49.783)
C2': (52.901,-111.420,-51.407)
C2: (52.272,-116.044,-48.200)
N1: (51.175,-116.744,-48.521)
N3: (52.628,-114.819,-48.576)
N6: (49.180,-116.880,-49.707)
N7: (49.757,-114.022,-50.561)
N9: (51.715,-113.055,-49.992)
O5': (50.294,-109.104,-48.730)
O3': (54.291,-109.384,-51.068)
Image (generated by PyMOL):