Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2243:A2490
Extra
PDB:
ATOM 1 O3' U A2242 -99.638 -53.681 12.392 1.00 0.01 O
ATOM 2 P G A2243 -100.601 -54.269 11.293 1.00 0.01 P
ATOM 3 OP1 G A2243 -100.954 -53.194 10.400 1.00 0.01 O
ATOM 4 OP2 G A2243 -101.643 -55.007 11.976 1.00 0.01 O
ATOM 5 O5' G A2243 -99.647 -55.248 10.558 1.00 0.01 O
ATOM 6 C5' G A2243 -98.559 -54.731 9.813 1.00 0.01 C
ATOM 7 C4' G A2243 -97.616 -55.816 9.406 1.00 0.01 C
ATOM 8 O4' G A2243 -98.313 -57.068 9.482 1.00 0.01 O
ATOM 9 C3' G A2243 -97.097 -55.713 8.010 1.00 0.01 C
ATOM 10 O3' G A2243 -95.839 -56.338 7.950 1.00 0.01 O
ATOM 11 C2' G A2243 -98.126 -56.497 7.209 1.00 0.01 C
ATOM 12 O2' G A2243 -97.620 -57.127 6.063 1.00 0.01 O
ATOM 13 C1' G A2243 -98.663 -57.515 8.206 1.00 0.01 C
ATOM 14 N9 G A2243 -100.121 -57.616 8.174 1.00 0.01 N
ATOM 15 C8 G A2243 -101.146 -56.882 8.797 1.00 0.01 C
ATOM 16 N7 G A2243 -102.363 -57.215 8.486 1.00 0.01 N
ATOM 17 C5 G A2243 -102.063 -58.237 7.615 1.00 0.01 C
ATOM 18 C6 G A2243 -102.930 -59.026 6.926 1.00 0.01 C
ATOM 19 O6 G A2243 -104.144 -59.032 6.932 1.00 0.01 O
ATOM 20 N1 G A2243 -102.217 -59.901 6.171 1.00 0.01 N
ATOM 21 C2 G A2243 -100.847 -60.029 6.074 1.00 0.01 C
ATOM 22 N2 G A2243 -100.433 -60.997 5.212 1.00 0.01 N
ATOM 23 N3 G A2243 -99.987 -59.299 6.718 1.00 0.01 N
ATOM 24 C4 G A2243 -100.722 -58.481 7.424 1.00 0.01 C
ATOM 25 P G A2244 -94.535 -55.469 7.708 1.00 0.01 P
ATOM 26 OP1 G A2244 -94.982 -54.140 7.300 1.00 0.01 O
ATOM 27 OP2 G A2244 -93.687 -56.252 6.806 1.00 0.01 O
ATOM 28 O5' G A2244 -93.869 -55.375 9.132 1.00 0.01 O
TER
ATOM 1 O3' C B2489 -97.425 -61.696 4.537 1.00 0.01 O
ATOM 2 P A B2490 -96.460 -61.723 5.814 1.00 0.01 P
ATOM 3 OP1 A B2490 -97.148 -62.475 6.854 1.00 0.01 O
ATOM 4 OP2 A B2490 -96.059 -60.324 6.082 1.00 0.01 O
ATOM 5 O5' A B2490 -95.217 -62.553 5.309 1.00 0.01 O
ATOM 6 C5' A B2490 -95.018 -63.873 5.764 1.00 0.01 C
ATOM 7 C4' A B2490 -93.662 -64.368 5.404 1.00 0.01 C
ATOM 8 O4' A B2490 -93.185 -63.587 4.297 1.00 0.01 O
ATOM 9 C3' A B2490 -92.624 -64.233 6.499 1.00 0.01 C
ATOM 10 O3' A B2490 -91.675 -65.296 6.403 1.00 0.01 O
ATOM 11 C2' A B2490 -91.970 -62.913 6.172 1.00 0.01 C
ATOM 12 O2' A B2490 -90.667 -62.769 6.665 1.00 0.01 O
ATOM 13 C1' A B2490 -92.003 -62.921 4.654 1.00 0.01 C
ATOM 14 N9 A B2490 -92.063 -61.589 4.078 1.00 0.01 N
ATOM 15 C8 A B2490 -92.904 -60.663 4.562 1.00 0.01 C
ATOM 16 N7 A B2490 -92.809 -59.548 3.952 1.00 0.01 N
ATOM 17 C5 A B2490 -91.846 -59.747 2.994 1.00 0.01 C
ATOM 18 C6 A B2490 -91.331 -58.866 2.030 1.00 0.01 C
ATOM 19 N6 A B2490 -91.777 -57.588 1.894 1.00 0.01 N
ATOM 20 N1 A B2490 -90.375 -59.370 1.216 1.00 0.01 N
ATOM 21 C2 A B2490 -90.015 -60.634 1.408 1.00 0.01 C
ATOM 22 N3 A B2490 -90.444 -61.532 2.275 1.00 0.01 N
ATOM 23 C4 A B2490 -91.374 -61.017 3.052 1.00 0.01 C
ATOM 24 P C B2491 -92.020 -66.730 7.035 1.00 0.01 P
ATOM 25 OP1 C B2491 -93.392 -66.652 7.552 1.00 0.01 O
ATOM 26 OP2 C B2491 -90.945 -67.062 7.952 1.00 0.01 O
ATOM 27 O5' C B2491 -91.976 -67.702 5.780 1.00 0.01 O
TER
ATOM 2 P G A2243 -100.601 -54.269 11.293 1.00 0.01 P
ATOM 3 OP1 G A2243 -100.954 -53.194 10.400 1.00 0.01 O
ATOM 4 OP2 G A2243 -101.643 -55.007 11.976 1.00 0.01 O
ATOM 5 O5' G A2243 -99.647 -55.248 10.558 1.00 0.01 O
ATOM 6 C5' G A2243 -98.559 -54.731 9.813 1.00 0.01 C
ATOM 7 C4' G A2243 -97.616 -55.816 9.406 1.00 0.01 C
ATOM 8 O4' G A2243 -98.313 -57.068 9.482 1.00 0.01 O
ATOM 9 C3' G A2243 -97.097 -55.713 8.010 1.00 0.01 C
ATOM 10 O3' G A2243 -95.839 -56.338 7.950 1.00 0.01 O
ATOM 11 C2' G A2243 -98.126 -56.497 7.209 1.00 0.01 C
ATOM 12 O2' G A2243 -97.620 -57.127 6.063 1.00 0.01 O
ATOM 13 C1' G A2243 -98.663 -57.515 8.206 1.00 0.01 C
ATOM 14 N9 G A2243 -100.121 -57.616 8.174 1.00 0.01 N
ATOM 15 C8 G A2243 -101.146 -56.882 8.797 1.00 0.01 C
ATOM 16 N7 G A2243 -102.363 -57.215 8.486 1.00 0.01 N
ATOM 17 C5 G A2243 -102.063 -58.237 7.615 1.00 0.01 C
ATOM 18 C6 G A2243 -102.930 -59.026 6.926 1.00 0.01 C
ATOM 19 O6 G A2243 -104.144 -59.032 6.932 1.00 0.01 O
ATOM 20 N1 G A2243 -102.217 -59.901 6.171 1.00 0.01 N
ATOM 21 C2 G A2243 -100.847 -60.029 6.074 1.00 0.01 C
ATOM 22 N2 G A2243 -100.433 -60.997 5.212 1.00 0.01 N
ATOM 23 N3 G A2243 -99.987 -59.299 6.718 1.00 0.01 N
ATOM 24 C4 G A2243 -100.722 -58.481 7.424 1.00 0.01 C
ATOM 25 P G A2244 -94.535 -55.469 7.708 1.00 0.01 P
ATOM 26 OP1 G A2244 -94.982 -54.140 7.300 1.00 0.01 O
ATOM 27 OP2 G A2244 -93.687 -56.252 6.806 1.00 0.01 O
ATOM 28 O5' G A2244 -93.869 -55.375 9.132 1.00 0.01 O
TER
ATOM 1 O3' C B2489 -97.425 -61.696 4.537 1.00 0.01 O
ATOM 2 P A B2490 -96.460 -61.723 5.814 1.00 0.01 P
ATOM 3 OP1 A B2490 -97.148 -62.475 6.854 1.00 0.01 O
ATOM 4 OP2 A B2490 -96.059 -60.324 6.082 1.00 0.01 O
ATOM 5 O5' A B2490 -95.217 -62.553 5.309 1.00 0.01 O
ATOM 6 C5' A B2490 -95.018 -63.873 5.764 1.00 0.01 C
ATOM 7 C4' A B2490 -93.662 -64.368 5.404 1.00 0.01 C
ATOM 8 O4' A B2490 -93.185 -63.587 4.297 1.00 0.01 O
ATOM 9 C3' A B2490 -92.624 -64.233 6.499 1.00 0.01 C
ATOM 10 O3' A B2490 -91.675 -65.296 6.403 1.00 0.01 O
ATOM 11 C2' A B2490 -91.970 -62.913 6.172 1.00 0.01 C
ATOM 12 O2' A B2490 -90.667 -62.769 6.665 1.00 0.01 O
ATOM 13 C1' A B2490 -92.003 -62.921 4.654 1.00 0.01 C
ATOM 14 N9 A B2490 -92.063 -61.589 4.078 1.00 0.01 N
ATOM 15 C8 A B2490 -92.904 -60.663 4.562 1.00 0.01 C
ATOM 16 N7 A B2490 -92.809 -59.548 3.952 1.00 0.01 N
ATOM 17 C5 A B2490 -91.846 -59.747 2.994 1.00 0.01 C
ATOM 18 C6 A B2490 -91.331 -58.866 2.030 1.00 0.01 C
ATOM 19 N6 A B2490 -91.777 -57.588 1.894 1.00 0.01 N
ATOM 20 N1 A B2490 -90.375 -59.370 1.216 1.00 0.01 N
ATOM 21 C2 A B2490 -90.015 -60.634 1.408 1.00 0.01 C
ATOM 22 N3 A B2490 -90.444 -61.532 2.275 1.00 0.01 N
ATOM 23 C4 A B2490 -91.374 -61.017 3.052 1.00 0.01 C
ATOM 24 P C B2491 -92.020 -66.730 7.035 1.00 0.01 P
ATOM 25 OP1 C B2491 -93.392 -66.652 7.552 1.00 0.01 O
ATOM 26 OP2 C B2491 -90.945 -67.062 7.952 1.00 0.01 O
ATOM 27 O5' C B2491 -91.976 -67.702 5.780 1.00 0.01 O
TER
Atoms:
OP1: (-100.954,-53.194,10.400)
OP2: (-101.643,-55.007,11.976)
C3': (-97.097,-55.713,8.010)
C1': (-98.663,-57.515,8.206)
C5': (-98.559,-54.731,9.813)
O6: (-104.144,-59.032,6.932)
O4': (-98.313,-57.068,9.482)
C8: (-101.146,-56.882,8.797)
C2: (-100.847,-60.029,6.074)
C6: (-102.930,-59.026,6.926)
C5: (-102.063,-58.237,7.615)
C4: (-100.722,-58.481,7.424)
P: (-100.601,-54.269,11.293)
C4': (-97.616,-55.816,9.406)
C2': (-98.126,-56.497,7.209)
O2': (-97.620,-57.127,6.063)
N1: (-102.217,-59.901,6.171)
N2: (-100.433,-60.997,5.212)
N3: (-99.987,-59.299,6.718)
N7: (-102.363,-57.215,8.486)
N9: (-100.121,-57.616,8.174)
O5': (-99.647,-55.248,10.558)
O3': (-95.839,-56.338,7.950)
OP2: (-101.643,-55.007,11.976)
C3': (-97.097,-55.713,8.010)
C1': (-98.663,-57.515,8.206)
C5': (-98.559,-54.731,9.813)
O6: (-104.144,-59.032,6.932)
O4': (-98.313,-57.068,9.482)
C8: (-101.146,-56.882,8.797)
C2: (-100.847,-60.029,6.074)
C6: (-102.930,-59.026,6.926)
C5: (-102.063,-58.237,7.615)
C4: (-100.722,-58.481,7.424)
P: (-100.601,-54.269,11.293)
C4': (-97.616,-55.816,9.406)
C2': (-98.126,-56.497,7.209)
O2': (-97.620,-57.127,6.063)
N1: (-102.217,-59.901,6.171)
N2: (-100.433,-60.997,5.212)
N3: (-99.987,-59.299,6.718)
N7: (-102.363,-57.215,8.486)
N9: (-100.121,-57.616,8.174)
O5': (-99.647,-55.248,10.558)
O3': (-95.839,-56.338,7.950)
OP1: (-97.148,-62.475,6.854)
OP2: (-96.059,-60.324,6.082)
C3': (-92.624,-64.233,6.499)
C1': (-92.003,-62.921,4.654)
C5': (-95.018,-63.873,5.764)
O4': (-93.185,-63.587,4.297)
C8: (-92.904,-60.663,4.562)
O2': (-90.667,-62.769,6.665)
C6: (-91.331,-58.866,2.030)
C5: (-91.846,-59.747,2.994)
C4: (-91.374,-61.017,3.052)
P: (-96.460,-61.723,5.814)
C4': (-93.662,-64.368,5.404)
C2': (-91.970,-62.913,6.172)
C2: (-90.015,-60.634,1.408)
N1: (-90.375,-59.370,1.216)
N3: (-90.444,-61.532,2.275)
N6: (-91.777,-57.588,1.894)
N7: (-92.809,-59.548,3.952)
N9: (-92.063,-61.589,4.078)
O5': (-95.217,-62.553,5.309)
O3': (-91.675,-65.296,6.403)
OP2: (-96.059,-60.324,6.082)
C3': (-92.624,-64.233,6.499)
C1': (-92.003,-62.921,4.654)
C5': (-95.018,-63.873,5.764)
O4': (-93.185,-63.587,4.297)
C8: (-92.904,-60.663,4.562)
O2': (-90.667,-62.769,6.665)
C6: (-91.331,-58.866,2.030)
C5: (-91.846,-59.747,2.994)
C4: (-91.374,-61.017,3.052)
P: (-96.460,-61.723,5.814)
C4': (-93.662,-64.368,5.404)
C2': (-91.970,-62.913,6.172)
C2: (-90.015,-60.634,1.408)
N1: (-90.375,-59.370,1.216)
N3: (-90.444,-61.532,2.275)
N6: (-91.777,-57.588,1.894)
N7: (-92.809,-59.548,3.952)
N9: (-92.063,-61.589,4.078)
O5': (-95.217,-62.553,5.309)
O3': (-91.675,-65.296,6.403)
Image (generated by PyMOL):