ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:01920:01961

Extra

PDB:
ATOM 1 O3' A A1919 122.185 118.124 104.511 1.00 57.28 O
ATOM 2 P G A1920 121.527 118.880 105.770 1.00 57.59 P
ATOM 3 OP1 G A1920 122.604 119.619 106.480 1.00 58.07 O
ATOM 4 OP2 G A1920 120.691 117.899 106.510 1.00 56.27 O
ATOM 5 O5' G A1920 120.599 119.988 105.111 1.00 58.10 O
ATOM 6 C5' G A1920 119.384 120.401 105.735 1.00 57.48 C
ATOM 7 C4' G A1920 118.481 121.020 104.705 1.00 58.76 C
ATOM 8 O4' G A1920 118.285 120.078 103.616 1.00 56.94 O
ATOM 9 C3' G A1920 117.081 121.353 105.184 1.00 58.61 C
ATOM 10 O3' G A1920 117.060 122.618 105.846 1.00 62.44 O
ATOM 11 C2' G A1920 116.305 121.351 103.874 1.00 57.28 C
ATOM 12 O2' G A1920 116.529 122.529 103.121 1.00 55.08 O
ATOM 13 C1' G A1920 116.950 120.163 103.149 1.00 55.85 C
ATOM 14 N9 G A1920 116.295 118.882 103.419 1.00 53.52 N
ATOM 15 C8 G A1920 116.834 117.799 104.073 1.00 53.70 C
ATOM 16 N7 G A1920 116.002 116.798 104.188 1.00 52.50 N
ATOM 17 C5 G A1920 114.843 117.242 103.567 1.00 52.35 C
ATOM 18 C6 G A1920 113.594 116.595 103.383 1.00 51.65 C
ATOM 19 O6 G A1920 113.249 115.465 103.751 1.00 50.09 O
ATOM 20 N1 G A1920 112.697 117.404 102.694 1.00 50.08 N
ATOM 21 C2 G A1920 112.963 118.671 102.243 1.00 50.35 C
ATOM 22 N2 G A1920 111.968 119.285 101.588 1.00 50.37 N
ATOM 23 N3 G A1920 114.117 119.290 102.416 1.00 50.65 N
ATOM 24 C4 G A1920 115.007 118.523 103.079 1.00 52.56 C
ATOM 25 P C A1921 116.376 122.755 107.299 1.00 64.59 P
ATOM 26 OP1 C A1921 116.622 124.150 107.742 1.00 64.41 O
ATOM 27 OP2 C A1921 116.820 121.622 108.150 1.00 65.28 O
ATOM 28 O5' C A1921 114.816 122.570 107.031 1.00 64.28 O
TER

ATOM 1 O3' G B1960 111.120 121.787 99.602 1.00 45.00 O
ATOM 2 P A B1961 110.517 123.106 100.306 1.00 46.01 P
ATOM 3 OP1 A B1961 109.648 122.624 101.404 1.00 47.41 O
ATOM 4 OP2 A B1961 109.958 124.007 99.268 1.00 46.54 O
ATOM 5 O5' A B1961 111.786 123.841 100.929 1.00 48.91 O
ATOM 6 C5' A B1961 112.602 123.199 101.928 1.00 49.54 C
ATOM 7 C4' A B1961 113.867 123.994 102.168 1.00 51.03 C
ATOM 8 O4' A B1961 114.655 124.051 100.950 1.00 49.86 O
ATOM 9 C3' A B1961 113.700 125.454 102.551 1.00 52.79 C
ATOM 10 O3' A B1961 113.394 125.589 103.937 1.00 57.55 O
ATOM 11 C2' A B1961 115.073 126.020 102.209 1.00 52.03 C
ATOM 12 O2' A B1961 116.054 125.698 103.176 1.00 55.99 O
ATOM 13 C1' A B1961 115.403 125.258 100.925 1.00 49.19 C
ATOM 14 N9 A B1961 115.055 126.004 99.718 1.00 46.64 N
ATOM 15 C8 A B1961 113.934 125.874 98.940 1.00 44.56 C
ATOM 16 N7 A B1961 113.905 126.687 97.915 1.00 45.74 N
ATOM 17 C5 A B1961 115.090 127.403 98.022 1.00 46.54 C
ATOM 18 C6 A B1961 115.663 128.417 97.228 1.00 46.33 C
ATOM 19 N6 A B1961 115.101 128.901 96.123 1.00 47.02 N
ATOM 20 N1 A B1961 116.855 128.918 97.615 1.00 46.56 N
ATOM 21 C2 A B1961 117.424 128.425 98.718 1.00 44.57 C
ATOM 22 N3 A B1961 116.993 127.474 99.538 1.00 45.03 N
ATOM 23 C4 A B1961 115.805 126.996 99.131 1.00 46.48 C
ATOM 24 P U B1962 112.500 126.831 104.451 1.00 61.88 P
ATOM 25 OP1 U B1962 112.401 126.698 105.927 1.00 61.16 O
ATOM 26 OP2 U B1962 111.251 126.902 103.636 1.00 62.33 O
ATOM 27 O5' U B1962 113.379 128.116 104.115 1.00 59.23 O
TER

Atoms:
OP1: (122.604,119.619,106.480)
OP2: (120.691,117.899,106.510)
C3': (117.081,121.353,105.184)
C1': (116.950,120.163,103.149)
C5': (119.384,120.401,105.735)
O6: (113.249,115.465,103.751)
O4': (118.285,120.078,103.616)
C8: (116.834,117.799,104.073)
C2: (112.963,118.671,102.243)
C6: (113.594,116.595,103.383)
C5: (114.843,117.242,103.567)
C4: (115.007,118.523,103.079)
P: (121.527,118.880,105.770)
C4': (118.481,121.020,104.705)
C2': (116.305,121.351,103.874)
O2': (116.529,122.529,103.121)
N1: (112.697,117.404,102.694)
N2: (111.968,119.285,101.588)
N3: (114.117,119.290,102.416)
N7: (116.002,116.798,104.188)
N9: (116.295,118.882,103.419)
O5': (120.599,119.988,105.111)
O3': (117.060,122.618,105.846)
OP1: (109.648,122.624,101.404)
OP2: (109.958,124.007,99.268)
C3': (113.700,125.454,102.551)
C1': (115.403,125.258,100.925)
C5': (112.602,123.199,101.928)
O4': (114.655,124.051,100.950)
C8: (113.934,125.874,98.940)
O2': (116.054,125.698,103.176)
C6: (115.663,128.417,97.228)
C5: (115.090,127.403,98.022)
C4: (115.805,126.996,99.131)
P: (110.517,123.106,100.306)
C4': (113.867,123.994,102.168)
C2': (115.073,126.020,102.209)
C2: (117.424,128.425,98.718)
N1: (116.855,128.918,97.615)
N3: (116.993,127.474,99.538)
N6: (115.101,128.901,96.123)
N7: (113.905,126.687,97.915)
N9: (115.055,126.004,99.718)
O5': (111.786,123.841,100.929)
O3': (113.394,125.589,103.937)
Image (generated by PyMOL):
PyMOL image
show in jmol