Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1926:A1927
Extra
PDB:
ATOM 1 O3' G A1925 98.118 123.936 105.454 1.00 54.49 O
ATOM 2 P U A1926 97.460 122.545 105.005 1.00 54.48 P
ATOM 3 OP1 U A1926 96.159 122.852 104.382 1.00 54.25 O
ATOM 4 OP2 U A1926 97.501 121.694 106.213 1.00 54.62 O
ATOM 5 O5' U A1926 98.477 121.914 103.954 1.00 54.87 O
ATOM 6 C5' U A1926 98.008 121.098 102.875 1.00 55.26 C
ATOM 7 C4' U A1926 98.691 119.751 102.893 1.00 55.98 C
ATOM 8 O4' U A1926 100.041 119.847 102.390 1.00 55.48 O
ATOM 9 C3' U A1926 98.764 119.007 104.225 1.00 56.13 C
ATOM 10 O3' U A1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 11 C2' U A1926 100.220 119.172 104.636 1.00 55.74 C
ATOM 12 O2' U A1926 100.661 118.022 105.320 1.00 59.46 O
ATOM 13 C1' U A1926 100.914 119.199 103.281 1.00 55.12 C
ATOM 14 N1 U A1926 102.220 119.872 103.230 1.00 53.88 N
ATOM 15 C2 U A1926 103.278 119.189 102.633 1.00 54.06 C
ATOM 16 O2 U A1926 103.197 118.054 102.220 1.00 53.62 O
ATOM 17 N3 U A1926 104.449 119.892 102.547 1.00 54.21 N
ATOM 18 C4 U A1926 104.692 121.164 103.006 1.00 53.90 C
ATOM 19 O4 U A1926 105.844 121.613 102.953 1.00 53.26 O
ATOM 20 C5 U A1926 103.565 121.791 103.635 1.00 53.74 C
ATOM 21 C6 U A1926 102.399 121.137 103.726 1.00 53.37 C
ATOM 22 P A A1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 23 OP1 A A1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 24 OP2 A A1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 25 O5' A A1927 97.488 117.087 106.192 1.00 57.40 O
TER
ATOM 1 O3' U B1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 2 P A B1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 3 OP1 A B1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 4 OP2 A B1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 5 O5' A B1927 97.488 117.087 106.192 1.00 57.40 O
ATOM 6 C5' A B1927 98.616 116.587 106.878 1.00 57.78 C
ATOM 7 C4' A B1927 98.200 115.933 108.156 1.00 58.65 C
ATOM 8 O4' A B1927 99.393 115.384 108.752 1.00 59.50 O
ATOM 9 C3' A B1927 97.605 116.899 109.168 1.00 58.49 C
ATOM 10 O3' A B1927 96.722 116.172 110.010 1.00 58.39 O
ATOM 11 C2' A B1927 98.801 117.261 110.027 1.00 59.14 C
ATOM 12 O2' A B1927 98.396 117.552 111.342 1.00 59.88 O
ATOM 13 C1' A B1927 99.592 115.960 110.006 1.00 60.20 C
ATOM 14 N9 A B1927 101.016 116.181 110.174 1.00 61.98 N
ATOM 15 C8 A B1927 101.888 116.861 109.360 1.00 62.19 C
ATOM 16 N7 A B1927 103.109 116.919 109.833 1.00 62.57 N
ATOM 17 C5 A B1927 103.035 116.217 111.026 1.00 62.60 C
ATOM 18 C6 A B1927 103.987 115.913 111.992 1.00 62.33 C
ATOM 19 N6 A B1927 105.258 116.289 111.904 1.00 62.65 N
ATOM 20 N1 A B1927 103.588 115.194 113.068 1.00 62.85 N
ATOM 21 C2 A B1927 102.306 114.808 113.143 1.00 63.43 C
ATOM 22 N3 A B1927 101.315 115.031 112.289 1.00 63.87 N
ATOM 23 C4 A B1927 101.754 115.750 111.242 1.00 63.10 C
ATOM 24 P C B1928 95.141 116.408 109.937 1.00 58.99 P
ATOM 25 OP1 C B1928 94.878 117.350 108.828 1.00 58.57 O
ATOM 26 OP2 C B1928 94.694 116.738 111.311 1.00 59.02 O
ATOM 27 O5' C B1928 94.612 114.946 109.579 1.00 58.71 O
TER
ATOM 2 P U A1926 97.460 122.545 105.005 1.00 54.48 P
ATOM 3 OP1 U A1926 96.159 122.852 104.382 1.00 54.25 O
ATOM 4 OP2 U A1926 97.501 121.694 106.213 1.00 54.62 O
ATOM 5 O5' U A1926 98.477 121.914 103.954 1.00 54.87 O
ATOM 6 C5' U A1926 98.008 121.098 102.875 1.00 55.26 C
ATOM 7 C4' U A1926 98.691 119.751 102.893 1.00 55.98 C
ATOM 8 O4' U A1926 100.041 119.847 102.390 1.00 55.48 O
ATOM 9 C3' U A1926 98.764 119.007 104.225 1.00 56.13 C
ATOM 10 O3' U A1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 11 C2' U A1926 100.220 119.172 104.636 1.00 55.74 C
ATOM 12 O2' U A1926 100.661 118.022 105.320 1.00 59.46 O
ATOM 13 C1' U A1926 100.914 119.199 103.281 1.00 55.12 C
ATOM 14 N1 U A1926 102.220 119.872 103.230 1.00 53.88 N
ATOM 15 C2 U A1926 103.278 119.189 102.633 1.00 54.06 C
ATOM 16 O2 U A1926 103.197 118.054 102.220 1.00 53.62 O
ATOM 17 N3 U A1926 104.449 119.892 102.547 1.00 54.21 N
ATOM 18 C4 U A1926 104.692 121.164 103.006 1.00 53.90 C
ATOM 19 O4 U A1926 105.844 121.613 102.953 1.00 53.26 O
ATOM 20 C5 U A1926 103.565 121.791 103.635 1.00 53.74 C
ATOM 21 C6 U A1926 102.399 121.137 103.726 1.00 53.37 C
ATOM 22 P A A1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 23 OP1 A A1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 24 OP2 A A1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 25 O5' A A1927 97.488 117.087 106.192 1.00 57.40 O
TER
ATOM 1 O3' U B1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 2 P A B1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 3 OP1 A B1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 4 OP2 A B1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 5 O5' A B1927 97.488 117.087 106.192 1.00 57.40 O
ATOM 6 C5' A B1927 98.616 116.587 106.878 1.00 57.78 C
ATOM 7 C4' A B1927 98.200 115.933 108.156 1.00 58.65 C
ATOM 8 O4' A B1927 99.393 115.384 108.752 1.00 59.50 O
ATOM 9 C3' A B1927 97.605 116.899 109.168 1.00 58.49 C
ATOM 10 O3' A B1927 96.722 116.172 110.010 1.00 58.39 O
ATOM 11 C2' A B1927 98.801 117.261 110.027 1.00 59.14 C
ATOM 12 O2' A B1927 98.396 117.552 111.342 1.00 59.88 O
ATOM 13 C1' A B1927 99.592 115.960 110.006 1.00 60.20 C
ATOM 14 N9 A B1927 101.016 116.181 110.174 1.00 61.98 N
ATOM 15 C8 A B1927 101.888 116.861 109.360 1.00 62.19 C
ATOM 16 N7 A B1927 103.109 116.919 109.833 1.00 62.57 N
ATOM 17 C5 A B1927 103.035 116.217 111.026 1.00 62.60 C
ATOM 18 C6 A B1927 103.987 115.913 111.992 1.00 62.33 C
ATOM 19 N6 A B1927 105.258 116.289 111.904 1.00 62.65 N
ATOM 20 N1 A B1927 103.588 115.194 113.068 1.00 62.85 N
ATOM 21 C2 A B1927 102.306 114.808 113.143 1.00 63.43 C
ATOM 22 N3 A B1927 101.315 115.031 112.289 1.00 63.87 N
ATOM 23 C4 A B1927 101.754 115.750 111.242 1.00 63.10 C
ATOM 24 P C B1928 95.141 116.408 109.937 1.00 58.99 P
ATOM 25 OP1 C B1928 94.878 117.350 108.828 1.00 58.57 O
ATOM 26 OP2 C B1928 94.694 116.738 111.311 1.00 59.02 O
ATOM 27 O5' C B1928 94.612 114.946 109.579 1.00 58.71 O
TER
Atoms:
C4: (104.692,121.164,103.006)
N3: (104.449,119.892,102.547)
OP1: (96.159,122.852,104.382)
OP2: (97.501,121.694,106.213)
C2: (103.278,119.189,102.633)
C1': (100.914,119.199,103.281)
C3': (98.764,119.007,104.225)
O5': (98.477,121.914,103.954)
O4': (100.041,119.847,102.390)
C5': (98.008,121.098,102.875)
P: (97.460,122.545,105.005)
C4': (98.691,119.751,102.893)
C2': (100.220,119.172,104.636)
O2': (100.661,118.022,105.320)
N1: (102.220,119.872,103.230)
O4: (105.844,121.613,102.953)
O2: (103.197,118.054,102.220)
C6: (102.399,121.137,103.726)
C5: (103.565,121.791,103.635)
O3': (98.569,117.621,103.962)
N3: (104.449,119.892,102.547)
OP1: (96.159,122.852,104.382)
OP2: (97.501,121.694,106.213)
C2: (103.278,119.189,102.633)
C1': (100.914,119.199,103.281)
C3': (98.764,119.007,104.225)
O5': (98.477,121.914,103.954)
O4': (100.041,119.847,102.390)
C5': (98.008,121.098,102.875)
P: (97.460,122.545,105.005)
C4': (98.691,119.751,102.893)
C2': (100.220,119.172,104.636)
O2': (100.661,118.022,105.320)
N1: (102.220,119.872,103.230)
O4: (105.844,121.613,102.953)
O2: (103.197,118.054,102.220)
C6: (102.399,121.137,103.726)
C5: (103.565,121.791,103.635)
O3': (98.569,117.621,103.962)
OP1: (97.646,115.388,104.412)
OP2: (96.026,117.380,104.228)
C3': (97.605,116.899,109.168)
C1': (99.592,115.960,110.006)
C5': (98.616,116.587,106.878)
O4': (99.393,115.384,108.752)
C8: (101.888,116.861,109.360)
O2': (98.396,117.552,111.342)
C6: (103.987,115.913,111.992)
C5: (103.035,116.217,111.026)
C4: (101.754,115.750,111.242)
P: (97.341,116.827,104.638)
C4': (98.200,115.933,108.156)
C2': (98.801,117.261,110.027)
C2: (102.306,114.808,113.143)
N1: (103.588,115.194,113.068)
N3: (101.315,115.031,112.289)
N6: (105.258,116.289,111.904)
N7: (103.109,116.919,109.833)
N9: (101.016,116.181,110.174)
O5': (97.488,117.087,106.192)
O3': (96.722,116.172,110.010)
OP2: (96.026,117.380,104.228)
C3': (97.605,116.899,109.168)
C1': (99.592,115.960,110.006)
C5': (98.616,116.587,106.878)
O4': (99.393,115.384,108.752)
C8: (101.888,116.861,109.360)
O2': (98.396,117.552,111.342)
C6: (103.987,115.913,111.992)
C5: (103.035,116.217,111.026)
C4: (101.754,115.750,111.242)
P: (97.341,116.827,104.638)
C4': (98.200,115.933,108.156)
C2': (98.801,117.261,110.027)
C2: (102.306,114.808,113.143)
N1: (103.588,115.194,113.068)
N3: (101.315,115.031,112.289)
N6: (105.258,116.289,111.904)
N7: (103.109,116.919,109.833)
N9: (101.016,116.181,110.174)
O5': (97.488,117.087,106.192)
O3': (96.722,116.172,110.010)
Image (generated by PyMOL):