ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01920:01961

Extra

PDB:
ATOM 1 O3' A A1919 122.148 118.336 104.502 1.00 59.49 O
ATOM 2 P G A1920 121.479 119.113 105.741 1.00 59.58 P
ATOM 3 OP1 G A1920 122.559 119.837 106.464 1.00 61.14 O
ATOM 4 OP2 G A1920 120.618 118.153 106.475 1.00 59.78 O
ATOM 5 O5' G A1920 120.569 120.223 105.059 1.00 59.54 O
ATOM 6 C5' G A1920 119.351 120.654 105.666 1.00 58.48 C
ATOM 7 C4' G A1920 118.459 121.271 104.622 1.00 59.59 C
ATOM 8 O4' G A1920 118.263 120.328 103.533 1.00 57.75 O
ATOM 9 C3' G A1920 117.060 121.615 105.098 1.00 59.63 C
ATOM 10 O3' G A1920 117.051 122.898 105.726 1.00 63.83 O
ATOM 11 C2' G A1920 116.276 121.596 103.792 1.00 57.89 C
ATOM 12 O2' G A1920 116.483 122.772 103.032 1.00 56.57 O
ATOM 13 C1' G A1920 116.927 120.411 103.067 1.00 56.55 C
ATOM 14 N9 G A1920 116.276 119.127 103.328 1.00 54.40 N
ATOM 15 C8 G A1920 116.814 118.047 103.990 1.00 54.39 C
ATOM 16 N7 G A1920 115.984 117.044 104.100 1.00 53.33 N
ATOM 17 C5 G A1920 114.829 117.482 103.466 1.00 53.03 C
ATOM 18 C6 G A1920 113.581 116.830 103.271 1.00 51.75 C
ATOM 19 O6 G A1920 113.237 115.699 103.633 1.00 50.10 O
ATOM 20 N1 G A1920 112.687 117.636 102.577 1.00 49.94 N
ATOM 21 C2 G A1920 112.955 118.902 102.127 1.00 50.46 C
ATOM 22 N2 G A1920 111.963 119.518 101.470 1.00 50.75 N
ATOM 23 N3 G A1920 114.108 119.522 102.303 1.00 51.19 N
ATOM 24 C4 G A1920 114.994 118.761 102.975 1.00 52.84 C
ATOM 25 P C A1921 116.348 123.090 107.163 1.00 65.35 P
ATOM 26 OP1 C A1921 116.585 124.509 107.530 1.00 65.37 O
ATOM 27 OP2 C A1921 116.789 122.010 108.081 1.00 66.03 O
ATOM 28 O5' C A1921 114.791 122.882 106.884 1.00 65.94 O
TER

ATOM 1 O3' G B1960 111.133 122.049 99.521 1.00 47.06 O
ATOM 2 P A B1961 110.519 123.372 100.204 1.00 47.79 P
ATOM 3 OP1 A B1961 109.653 122.915 101.322 1.00 48.09 O
ATOM 4 OP2 A B1961 109.952 124.232 99.143 1.00 48.03 O
ATOM 5 O5' A B1961 111.784 124.136 100.802 1.00 50.50 O
ATOM 6 C5' A B1961 112.618 123.520 101.802 1.00 52.16 C
ATOM 7 C4' A B1961 113.873 124.336 102.026 1.00 53.89 C
ATOM 8 O4' A B1961 114.670 124.374 100.813 1.00 53.42 O
ATOM 9 C3' A B1961 113.694 125.804 102.376 1.00 55.76 C
ATOM 10 O3' A B1961 113.382 125.983 103.757 1.00 60.64 O
ATOM 11 C2' A B1961 115.068 126.369 102.038 1.00 54.81 C
ATOM 12 O2' A B1961 116.025 126.084 103.036 1.00 58.45 O
ATOM 13 C1' A B1961 115.420 125.580 100.776 1.00 51.60 C
ATOM 14 N9 A B1961 115.087 126.309 99.553 1.00 49.65 N
ATOM 15 C8 A B1961 113.981 126.167 98.751 1.00 48.24 C
ATOM 16 N7 A B1961 113.966 126.982 97.724 1.00 49.20 N
ATOM 17 C5 A B1961 115.144 127.707 97.854 1.00 48.84 C
ATOM 18 C6 A B1961 115.726 128.727 97.070 1.00 48.59 C
ATOM 19 N6 A B1961 115.182 129.210 95.955 1.00 48.44 N
ATOM 20 N1 A B1961 116.905 129.236 97.479 1.00 47.55 N
ATOM 21 C2 A B1961 117.458 128.747 98.593 1.00 47.41 C
ATOM 22 N3 A B1961 117.018 127.792 99.406 1.00 47.34 N
ATOM 23 C4 A B1961 115.842 127.305 98.977 1.00 49.10 C
ATOM 24 P U B1962 112.603 127.310 104.244 1.00 63.48 P
ATOM 25 OP1 U B1962 112.571 127.279 105.725 1.00 64.01 O
ATOM 26 OP2 U B1962 111.325 127.424 103.488 1.00 64.15 O
ATOM 27 O5' U B1962 113.548 128.509 103.793 1.00 61.09 O
TER

Atoms:
OP1: (122.559,119.837,106.464)
OP2: (120.618,118.153,106.475)
C3': (117.060,121.615,105.098)
C1': (116.927,120.411,103.067)
C5': (119.351,120.654,105.666)
O6: (113.237,115.699,103.633)
O4': (118.263,120.328,103.533)
C8: (116.814,118.047,103.990)
C2: (112.955,118.902,102.127)
C6: (113.581,116.830,103.271)
C5: (114.829,117.482,103.466)
C4: (114.994,118.761,102.975)
P: (121.479,119.113,105.741)
C4': (118.459,121.271,104.622)
C2': (116.276,121.596,103.792)
O2': (116.483,122.772,103.032)
N1: (112.687,117.636,102.577)
N2: (111.963,119.518,101.470)
N3: (114.108,119.522,102.303)
N7: (115.984,117.044,104.100)
N9: (116.276,119.127,103.328)
O5': (120.569,120.223,105.059)
O3': (117.051,122.898,105.726)
OP1: (109.653,122.915,101.322)
OP2: (109.952,124.232,99.143)
C3': (113.694,125.804,102.376)
C1': (115.420,125.580,100.776)
C5': (112.618,123.520,101.802)
O4': (114.670,124.374,100.813)
C8: (113.981,126.167,98.751)
O2': (116.025,126.084,103.036)
C6: (115.726,128.727,97.070)
C5: (115.144,127.707,97.854)
C4: (115.842,127.305,98.977)
P: (110.519,123.372,100.204)
C4': (113.873,124.336,102.026)
C2': (115.068,126.369,102.038)
C2: (117.458,128.747,98.593)
N1: (116.905,129.236,97.479)
N3: (117.018,127.792,99.406)
N6: (115.182,129.210,95.955)
N7: (113.966,126.982,97.724)
N9: (115.087,126.309,99.553)
O5': (111.784,124.136,100.802)
O3': (113.382,125.983,103.757)
Image (generated by PyMOL):
PyMOL image
show in jmol