ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01926:01927

Extra

PDB:
ATOM 1 O3' G A1925 97.194 123.623 103.929 1.00 43.79 O
ATOM 2 P U A1926 97.548 122.206 104.601 1.00 44.68 P
ATOM 3 OP1 U A1926 96.293 121.412 104.624 1.00 45.60 O
ATOM 4 OP2 U A1926 98.282 122.460 105.872 1.00 45.52 O
ATOM 5 O5' U A1926 98.567 121.510 103.595 1.00 42.98 O
ATOM 6 C5' U A1926 98.086 120.766 102.472 1.00 43.41 C
ATOM 7 C4' U A1926 98.765 119.418 102.395 1.00 45.09 C
ATOM 8 O4' U A1926 100.116 119.564 101.880 1.00 44.69 O
ATOM 9 C3' U A1926 98.877 118.612 103.688 1.00 45.69 C
ATOM 10 O3' U A1926 98.654 117.235 103.412 1.00 47.85 O
ATOM 11 C2' U A1926 100.338 118.806 104.081 1.00 44.86 C
ATOM 12 O2' U A1926 100.855 117.702 104.791 1.00 44.79 O
ATOM 13 C1' U A1926 101.016 118.872 102.717 1.00 43.84 C
ATOM 14 N1 U A1926 102.305 119.582 102.712 1.00 42.91 N
ATOM 15 C2 U A1926 103.394 118.933 102.160 1.00 42.19 C
ATOM 16 O2 U A1926 103.334 117.814 101.700 1.00 41.59 O
ATOM 17 N3 U A1926 104.564 119.646 102.170 1.00 42.69 N
ATOM 18 C4 U A1926 104.759 120.914 102.666 1.00 43.45 C
ATOM 19 O4 U A1926 105.882 121.416 102.614 1.00 42.73 O
ATOM 20 C5 U A1926 103.588 121.522 103.227 1.00 44.25 C
ATOM 21 C6 U A1926 102.431 120.852 103.232 1.00 43.43 C
ATOM 22 P A A1927 97.399 116.484 104.077 1.00 48.66 P
ATOM 23 OP1 A A1927 97.580 115.037 103.805 1.00 49.02 O
ATOM 24 OP2 A A1927 96.144 117.164 103.656 1.00 47.27 O
ATOM 25 O5' A A1927 97.591 116.714 105.635 1.00 48.34 O
TER

ATOM 1 O3' U B1926 98.654 117.235 103.412 1.00 47.85 O
ATOM 2 P A B1927 97.399 116.484 104.077 1.00 48.66 P
ATOM 3 OP1 A B1927 97.580 115.037 103.805 1.00 49.02 O
ATOM 4 OP2 A B1927 96.144 117.164 103.656 1.00 47.27 O
ATOM 5 O5' A B1927 97.591 116.714 105.635 1.00 48.34 O
ATOM 6 C5' A B1927 98.746 116.207 106.304 1.00 50.65 C
ATOM 7 C4' A B1927 98.346 115.551 107.597 1.00 52.21 C
ATOM 8 O4' A B1927 99.537 115.013 108.232 1.00 52.94 O
ATOM 9 C3' A B1927 97.703 116.484 108.614 1.00 52.20 C
ATOM 10 O3' A B1927 96.782 115.745 109.404 1.00 52.89 O
ATOM 11 C2' A B1927 98.894 116.908 109.462 1.00 52.82 C
ATOM 12 O2' A B1927 98.508 117.304 110.760 1.00 54.99 O
ATOM 13 C1' A B1927 99.723 115.622 109.490 1.00 53.49 C
ATOM 14 N9 A B1927 101.157 115.850 109.666 1.00 55.54 N
ATOM 15 C8 A B1927 102.005 116.552 108.843 1.00 55.87 C
ATOM 16 N7 A B1927 103.239 116.609 109.279 1.00 56.63 N
ATOM 17 C5 A B1927 103.209 115.889 110.463 1.00 57.23 C
ATOM 18 C6 A B1927 104.202 115.582 111.406 1.00 57.73 C
ATOM 19 N6 A B1927 105.468 115.984 111.299 1.00 58.67 N
ATOM 20 N1 A B1927 103.846 114.841 112.478 1.00 58.58 N
ATOM 21 C2 A B1927 102.571 114.442 112.586 1.00 58.62 C
ATOM 22 N3 A B1927 101.544 114.669 111.768 1.00 58.11 N
ATOM 23 C4 A B1927 101.934 115.407 110.712 1.00 57.40 C
ATOM 24 P C B1928 95.210 116.061 109.315 1.00 54.01 P
ATOM 25 OP1 C B1928 94.905 116.530 107.938 1.00 54.50 O
ATOM 26 OP2 C B1928 94.855 116.915 110.477 1.00 54.61 O
ATOM 27 O5' C B1928 94.550 114.629 109.537 1.00 52.42 O
TER

Atoms:
C4: (104.759,120.914,102.666)
N3: (104.564,119.646,102.170)
OP1: (96.293,121.412,104.624)
OP2: (98.282,122.460,105.872)
C2: (103.394,118.933,102.160)
C1': (101.016,118.872,102.717)
C3': (98.877,118.612,103.688)
O5': (98.567,121.510,103.595)
O4': (100.116,119.564,101.880)
C5': (98.086,120.766,102.472)
P: (97.548,122.206,104.601)
C4': (98.765,119.418,102.395)
C2': (100.338,118.806,104.081)
O2': (100.855,117.702,104.791)
N1: (102.305,119.582,102.712)
O4: (105.882,121.416,102.614)
O2: (103.334,117.814,101.700)
C6: (102.431,120.852,103.232)
C5: (103.588,121.522,103.227)
O3': (98.654,117.235,103.412)
OP1: (97.580,115.037,103.805)
OP2: (96.144,117.164,103.656)
C3': (97.703,116.484,108.614)
C1': (99.723,115.622,109.490)
C5': (98.746,116.207,106.304)
O4': (99.537,115.013,108.232)
C8: (102.005,116.552,108.843)
O2': (98.508,117.304,110.760)
C6: (104.202,115.582,111.406)
C5: (103.209,115.889,110.463)
C4: (101.934,115.407,110.712)
P: (97.399,116.484,104.077)
C4': (98.346,115.551,107.597)
C2': (98.894,116.908,109.462)
C2: (102.571,114.442,112.586)
N1: (103.846,114.841,112.478)
N3: (101.544,114.669,111.768)
N6: (105.468,115.984,111.299)
N7: (103.239,116.609,109.279)
N9: (101.157,115.850,109.666)
O5': (97.591,116.714,105.635)
O3': (96.782,115.745,109.404)
Image (generated by PyMOL):
PyMOL image
show in jmol