ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GID:B11:B103

Extra

PDB:
ATOM 1 O3' A A 10 73.388 36.677 82.050 1.00 26.61 O
ATOM 2 P A A 11 74.512 35.547 82.231 1.00 26.07 P
ATOM 3 OP1 A A 11 75.021 35.611 83.614 1.00 26.20 O
ATOM 4 OP2 A A 11 75.449 35.671 81.103 1.00 25.28 O
ATOM 5 O5' A A 11 73.674 34.207 82.078 1.00 20.38 O
ATOM 6 C5' A A 11 72.701 33.867 83.042 1.00 16.57 C
ATOM 7 C4' A A 11 71.865 32.760 82.516 1.00 15.52 C
ATOM 8 O4' A A 11 71.497 33.179 81.203 1.00 19.33 O
ATOM 9 C3' A A 11 72.673 31.518 82.264 1.00 21.09 C
ATOM 10 O3' A A 11 72.669 30.720 83.419 1.00 24.66 O
ATOM 11 C2' A A 11 71.964 30.858 81.100 1.00 24.33 C
ATOM 12 O2' A A 11 70.945 29.985 81.526 1.00 27.09 O
ATOM 13 C1' A A 11 71.396 32.064 80.358 1.00 20.20 C
ATOM 14 N9 A A 11 72.123 32.434 79.155 1.00 22.29 N
ATOM 15 C8 A A 11 72.966 33.511 79.008 1.00 23.09 C
ATOM 16 N7 A A 11 73.471 33.627 77.801 1.00 17.29 N
ATOM 17 C5 A A 11 72.917 32.560 77.119 1.00 15.30 C
ATOM 18 C6 A A 11 73.052 32.138 75.828 1.00 17.81 C
ATOM 19 N6 A A 11 73.807 32.761 74.931 1.00 21.67 N
ATOM 20 N1 A A 11 72.380 31.037 75.463 1.00 21.11 N
ATOM 21 C2 A A 11 71.614 30.419 76.364 1.00 20.95 C
ATOM 22 N3 A A 11 71.401 30.728 77.621 1.00 16.62 N
ATOM 23 C4 A A 11 72.094 31.819 77.942 1.00 16.27 C
ATOM 24 P A A 12 74.066 30.257 84.024 1.00 25.90 P
ATOM 25 OP1 A A 12 73.896 29.840 85.453 1.00 25.85 O
ATOM 26 OP2 A A 12 75.030 31.309 83.666 1.00 21.11 O
ATOM 27 O5' A A 12 74.399 29.025 83.108 1.00 21.19 O
TER

ATOM 1 O3' U B 102 79.939 34.575 68.336 1.00 30.69 O
ATOM 2 P A B 103 78.724 35.560 67.983 1.00 34.99 P
ATOM 3 OP1 A B 103 78.264 35.258 66.599 1.00 37.58 O
ATOM 4 OP2 A B 103 79.172 36.924 68.318 1.00 34.26 O
ATOM 5 O5' A B 103 77.580 35.091 68.983 1.00 30.45 O
ATOM 6 C5' A B 103 76.896 33.872 68.757 1.00 28.31 C
ATOM 7 C4' A B 103 75.957 33.580 69.895 1.00 27.30 C
ATOM 8 O4' A B 103 76.746 33.566 71.091 1.00 29.17 O
ATOM 9 C3' A B 103 74.878 34.613 70.173 1.00 27.45 C
ATOM 10 O3' A B 103 73.752 34.281 69.360 1.00 29.66 O
ATOM 11 C2' A B 103 74.579 34.332 71.637 1.00 31.49 C
ATOM 12 O2' A B 103 73.709 33.237 71.806 1.00 39.83 O
ATOM 13 C1' A B 103 75.953 33.943 72.177 1.00 26.52 C
ATOM 14 N9 A B 103 76.649 35.041 72.824 1.00 21.04 N
ATOM 15 C8 A B 103 77.437 35.966 72.210 1.00 18.28 C
ATOM 16 N7 A B 103 77.953 36.845 73.033 1.00 17.35 N
ATOM 17 C5 A B 103 77.464 36.466 74.274 1.00 15.54 C
ATOM 18 C6 A B 103 77.637 36.989 75.541 1.00 16.05 C
ATOM 19 N6 A B 103 78.390 38.042 75.803 1.00 19.88 N
ATOM 20 N1 A B 103 77.006 36.390 76.557 1.00 19.76 N
ATOM 21 C2 A B 103 76.257 35.322 76.303 1.00 21.59 C
ATOM 22 N3 A B 103 76.019 34.726 75.154 1.00 21.87 N
ATOM 23 C4 A B 103 76.659 35.359 74.162 1.00 18.99 C
ATOM 24 P A B 104 72.594 35.362 69.069 1.00 28.34 P
ATOM 25 OP1 A B 104 72.406 35.506 67.601 1.00 32.15 O
ATOM 26 OP2 A B 104 72.832 36.564 69.901 1.00 26.37 O
ATOM 27 O5' A B 104 71.305 34.587 69.565 1.00 25.47 O
TER

Atoms:
OP1: (75.021,35.611,83.614)
OP2: (75.449,35.671,81.103)
C3': (72.673,31.518,82.264)
C1': (71.396,32.064,80.358)
C5': (72.701,33.867,83.042)
O4': (71.497,33.179,81.203)
C8: (72.966,33.511,79.008)
O2': (70.945,29.985,81.526)
C6: (73.052,32.138,75.828)
C5: (72.917,32.560,77.119)
C4: (72.094,31.819,77.942)
P: (74.512,35.547,82.231)
C4': (71.865,32.760,82.516)
C2': (71.964,30.858,81.100)
C2: (71.614,30.419,76.364)
N1: (72.380,31.037,75.463)
N3: (71.401,30.728,77.621)
N6: (73.807,32.761,74.931)
N7: (73.471,33.627,77.801)
N9: (72.123,32.434,79.155)
O5': (73.674,34.207,82.078)
O3': (72.669,30.720,83.419)
OP1: (78.264,35.258,66.599)
OP2: (79.172,36.924,68.318)
C3': (74.878,34.613,70.173)
C1': (75.953,33.943,72.177)
C5': (76.896,33.872,68.757)
O4': (76.746,33.566,71.091)
C8: (77.437,35.966,72.210)
O2': (73.709,33.237,71.806)
C6: (77.637,36.989,75.541)
C5: (77.464,36.466,74.274)
C4: (76.659,35.359,74.162)
P: (78.724,35.560,67.983)
C4': (75.957,33.580,69.895)
C2': (74.579,34.332,71.637)
C2: (76.257,35.322,76.303)
N1: (77.006,36.390,76.557)
N3: (76.019,34.726,75.154)
N6: (78.390,38.042,75.803)
N7: (77.953,36.845,73.033)
N9: (76.649,35.041,72.824)
O5': (77.580,35.091,68.983)
O3': (73.752,34.281,69.360)
Image (generated by PyMOL):
PyMOL image
show in jmol