Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0449:0450
Extra
PDB:
ATOM 1 O3' A A 448 41.451 141.739 49.162 1.00 34.99 O
ATOM 2 P C A 449 42.358 142.919 48.567 1.00 35.68 P
ATOM 3 OP1 C A 449 41.696 143.425 47.341 1.00 37.49 O
ATOM 4 OP2 C A 449 43.754 142.428 48.495 1.00 31.71 O
ATOM 5 O5' C A 449 42.237 144.044 49.680 1.00 31.83 O
ATOM 6 C5' C A 449 43.386 144.714 50.162 1.00 35.42 C
ATOM 7 C4' C A 449 42.973 145.765 51.138 1.00 38.22 C
ATOM 8 O4' C A 449 42.116 145.163 52.144 1.00 39.04 O
ATOM 9 C3' C A 449 44.112 146.440 51.885 1.00 41.24 C
ATOM 10 O3' C A 449 43.713 147.778 52.120 1.00 44.72 O
ATOM 11 C2' C A 449 44.162 145.657 53.193 1.00 41.58 C
ATOM 12 O2' C A 449 44.676 146.417 54.272 1.00 44.45 O
ATOM 13 C1' C A 449 42.678 145.363 53.423 1.00 39.59 C
ATOM 14 N1 C A 449 42.391 144.177 54.252 1.00 37.18 N
ATOM 15 C2 C A 449 41.562 144.326 55.375 1.00 38.76 C
ATOM 16 O2 C A 449 41.118 145.452 55.655 1.00 40.77 O
ATOM 17 N3 C A 449 41.268 143.241 56.132 1.00 38.26 N
ATOM 18 C4 C A 449 41.773 142.049 55.810 1.00 37.12 C
ATOM 19 N4 C A 449 41.452 141.007 56.582 1.00 38.76 N
ATOM 20 C5 C A 449 42.631 141.872 54.683 1.00 35.90 C
ATOM 21 C6 C A 449 42.910 142.952 53.939 1.00 35.50 C
ATOM 22 P A A 450 44.107 148.916 51.067 1.00 47.08 P
ATOM 23 OP1 A A 450 43.361 150.122 51.480 1.00 46.73 O
ATOM 24 OP2 A A 450 43.959 148.385 49.682 1.00 44.83 O
ATOM 25 O5' A A 450 45.658 149.148 51.326 1.00 50.51 O
TER
ATOM 1 O3' C B 449 43.713 147.778 52.120 1.00 44.72 O
ATOM 2 P A B 450 44.107 148.916 51.067 1.00 47.08 P
ATOM 3 OP1 A B 450 43.361 150.122 51.480 1.00 46.73 O
ATOM 4 OP2 A B 450 43.959 148.385 49.682 1.00 44.83 O
ATOM 5 O5' A B 450 45.658 149.148 51.326 1.00 50.51 O
ATOM 6 C5' A B 450 46.480 149.823 50.358 1.00 53.33 C
ATOM 7 C4' A B 450 47.929 149.707 50.753 1.00 55.65 C
ATOM 8 O4' A B 450 48.176 150.471 51.960 1.00 57.73 O
ATOM 9 C3' A B 450 48.365 148.290 51.075 1.00 55.71 C
ATOM 10 O3' A B 450 48.760 147.652 49.862 1.00 57.67 O
ATOM 11 C2' A B 450 49.526 148.511 52.036 1.00 57.42 C
ATOM 12 O2' A B 450 50.717 148.833 51.347 1.00 56.88 O
ATOM 13 C1' A B 450 49.058 149.753 52.804 1.00 58.56 C
ATOM 14 N9 A B 450 48.364 149.522 54.074 1.00 59.63 N
ATOM 15 C8 A B 450 47.005 149.509 54.290 1.00 60.87 C
ATOM 16 N7 A B 450 46.669 149.374 55.551 1.00 61.60 N
ATOM 17 C5 A B 450 47.886 149.274 56.209 1.00 61.57 C
ATOM 18 C6 A B 450 48.217 149.154 57.573 1.00 61.54 C
ATOM 19 N6 A B 450 47.313 149.151 58.557 1.00 61.47 N
ATOM 20 N1 A B 450 49.525 149.061 57.896 1.00 60.84 N
ATOM 21 C2 A B 450 50.432 149.112 56.909 1.00 61.55 C
ATOM 22 N3 A B 450 50.247 149.251 55.594 1.00 60.60 N
ATOM 23 C4 A B 450 48.938 149.329 55.307 1.00 60.57 C
ATOM 24 P A B 451 48.541 146.070 49.669 1.00 59.44 P
ATOM 25 OP1 A B 451 48.949 145.764 48.265 1.00 56.86 O
ATOM 26 OP2 A B 451 47.174 145.687 50.132 1.00 58.83 O
ATOM 27 O5' A B 451 49.617 145.430 50.658 1.00 54.01 O
TER
ATOM 2 P C A 449 42.358 142.919 48.567 1.00 35.68 P
ATOM 3 OP1 C A 449 41.696 143.425 47.341 1.00 37.49 O
ATOM 4 OP2 C A 449 43.754 142.428 48.495 1.00 31.71 O
ATOM 5 O5' C A 449 42.237 144.044 49.680 1.00 31.83 O
ATOM 6 C5' C A 449 43.386 144.714 50.162 1.00 35.42 C
ATOM 7 C4' C A 449 42.973 145.765 51.138 1.00 38.22 C
ATOM 8 O4' C A 449 42.116 145.163 52.144 1.00 39.04 O
ATOM 9 C3' C A 449 44.112 146.440 51.885 1.00 41.24 C
ATOM 10 O3' C A 449 43.713 147.778 52.120 1.00 44.72 O
ATOM 11 C2' C A 449 44.162 145.657 53.193 1.00 41.58 C
ATOM 12 O2' C A 449 44.676 146.417 54.272 1.00 44.45 O
ATOM 13 C1' C A 449 42.678 145.363 53.423 1.00 39.59 C
ATOM 14 N1 C A 449 42.391 144.177 54.252 1.00 37.18 N
ATOM 15 C2 C A 449 41.562 144.326 55.375 1.00 38.76 C
ATOM 16 O2 C A 449 41.118 145.452 55.655 1.00 40.77 O
ATOM 17 N3 C A 449 41.268 143.241 56.132 1.00 38.26 N
ATOM 18 C4 C A 449 41.773 142.049 55.810 1.00 37.12 C
ATOM 19 N4 C A 449 41.452 141.007 56.582 1.00 38.76 N
ATOM 20 C5 C A 449 42.631 141.872 54.683 1.00 35.90 C
ATOM 21 C6 C A 449 42.910 142.952 53.939 1.00 35.50 C
ATOM 22 P A A 450 44.107 148.916 51.067 1.00 47.08 P
ATOM 23 OP1 A A 450 43.361 150.122 51.480 1.00 46.73 O
ATOM 24 OP2 A A 450 43.959 148.385 49.682 1.00 44.83 O
ATOM 25 O5' A A 450 45.658 149.148 51.326 1.00 50.51 O
TER
ATOM 1 O3' C B 449 43.713 147.778 52.120 1.00 44.72 O
ATOM 2 P A B 450 44.107 148.916 51.067 1.00 47.08 P
ATOM 3 OP1 A B 450 43.361 150.122 51.480 1.00 46.73 O
ATOM 4 OP2 A B 450 43.959 148.385 49.682 1.00 44.83 O
ATOM 5 O5' A B 450 45.658 149.148 51.326 1.00 50.51 O
ATOM 6 C5' A B 450 46.480 149.823 50.358 1.00 53.33 C
ATOM 7 C4' A B 450 47.929 149.707 50.753 1.00 55.65 C
ATOM 8 O4' A B 450 48.176 150.471 51.960 1.00 57.73 O
ATOM 9 C3' A B 450 48.365 148.290 51.075 1.00 55.71 C
ATOM 10 O3' A B 450 48.760 147.652 49.862 1.00 57.67 O
ATOM 11 C2' A B 450 49.526 148.511 52.036 1.00 57.42 C
ATOM 12 O2' A B 450 50.717 148.833 51.347 1.00 56.88 O
ATOM 13 C1' A B 450 49.058 149.753 52.804 1.00 58.56 C
ATOM 14 N9 A B 450 48.364 149.522 54.074 1.00 59.63 N
ATOM 15 C8 A B 450 47.005 149.509 54.290 1.00 60.87 C
ATOM 16 N7 A B 450 46.669 149.374 55.551 1.00 61.60 N
ATOM 17 C5 A B 450 47.886 149.274 56.209 1.00 61.57 C
ATOM 18 C6 A B 450 48.217 149.154 57.573 1.00 61.54 C
ATOM 19 N6 A B 450 47.313 149.151 58.557 1.00 61.47 N
ATOM 20 N1 A B 450 49.525 149.061 57.896 1.00 60.84 N
ATOM 21 C2 A B 450 50.432 149.112 56.909 1.00 61.55 C
ATOM 22 N3 A B 450 50.247 149.251 55.594 1.00 60.60 N
ATOM 23 C4 A B 450 48.938 149.329 55.307 1.00 60.57 C
ATOM 24 P A B 451 48.541 146.070 49.669 1.00 59.44 P
ATOM 25 OP1 A B 451 48.949 145.764 48.265 1.00 56.86 O
ATOM 26 OP2 A B 451 47.174 145.687 50.132 1.00 58.83 O
ATOM 27 O5' A B 451 49.617 145.430 50.658 1.00 54.01 O
TER
Atoms:
C2: (41.562,144.326,55.375)
OP1: (41.696,143.425,47.341)
OP2: (43.754,142.428,48.495)
C4: (41.773,142.049,55.810)
O5': (42.237,144.044,49.680)
C3': (44.112,146.440,51.885)
C1': (42.678,145.363,53.423)
O4': (42.116,145.163,52.144)
C5': (43.386,144.714,50.162)
P: (42.358,142.919,48.567)
O2: (41.118,145.452,55.655)
C4': (42.973,145.765,51.138)
C2': (44.162,145.657,53.193)
O2': (44.676,146.417,54.272)
N1: (42.391,144.177,54.252)
N3: (41.268,143.241,56.132)
N4: (41.452,141.007,56.582)
C6: (42.910,142.952,53.939)
C5: (42.631,141.872,54.683)
O3': (43.713,147.778,52.120)
OP1: (41.696,143.425,47.341)
OP2: (43.754,142.428,48.495)
C4: (41.773,142.049,55.810)
O5': (42.237,144.044,49.680)
C3': (44.112,146.440,51.885)
C1': (42.678,145.363,53.423)
O4': (42.116,145.163,52.144)
C5': (43.386,144.714,50.162)
P: (42.358,142.919,48.567)
O2: (41.118,145.452,55.655)
C4': (42.973,145.765,51.138)
C2': (44.162,145.657,53.193)
O2': (44.676,146.417,54.272)
N1: (42.391,144.177,54.252)
N3: (41.268,143.241,56.132)
N4: (41.452,141.007,56.582)
C6: (42.910,142.952,53.939)
C5: (42.631,141.872,54.683)
O3': (43.713,147.778,52.120)
OP1: (43.361,150.122,51.480)
OP2: (43.959,148.385,49.682)
C3': (48.365,148.290,51.075)
C1': (49.058,149.753,52.804)
C5': (46.480,149.823,50.358)
O4': (48.176,150.471,51.960)
C8: (47.005,149.509,54.290)
O2': (50.717,148.833,51.347)
C6: (48.217,149.154,57.573)
C5: (47.886,149.274,56.209)
C4: (48.938,149.329,55.307)
P: (44.107,148.916,51.067)
C4': (47.929,149.707,50.753)
C2': (49.526,148.511,52.036)
C2: (50.432,149.112,56.909)
N1: (49.525,149.061,57.896)
N3: (50.247,149.251,55.594)
N6: (47.313,149.151,58.557)
N7: (46.669,149.374,55.551)
N9: (48.364,149.522,54.074)
O5': (45.658,149.148,51.326)
O3': (48.760,147.652,49.862)
OP2: (43.959,148.385,49.682)
C3': (48.365,148.290,51.075)
C1': (49.058,149.753,52.804)
C5': (46.480,149.823,50.358)
O4': (48.176,150.471,51.960)
C8: (47.005,149.509,54.290)
O2': (50.717,148.833,51.347)
C6: (48.217,149.154,57.573)
C5: (47.886,149.274,56.209)
C4: (48.938,149.329,55.307)
P: (44.107,148.916,51.067)
C4': (47.929,149.707,50.753)
C2': (49.526,148.511,52.036)
C2: (50.432,149.112,56.909)
N1: (49.525,149.061,57.896)
N3: (50.247,149.251,55.594)
N6: (47.313,149.151,58.557)
N7: (46.669,149.374,55.551)
N9: (48.364,149.522,54.074)
O5': (45.658,149.148,51.326)
O3': (48.760,147.652,49.862)
Image (generated by PyMOL):