ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ASY:S6:S7

Extra

PDB:
ATOM 1 O3' G A 5 37.214 35.227 -22.497 1.00 57.59 O
ATOM 2 P A A 6 36.415 35.563 -23.867 1.00 51.26 P
ATOM 3 OP1 A A 6 35.007 35.724 -23.436 1.00 53.09 O
ATOM 4 OP2 A A 6 36.626 34.555 -24.935 1.00 47.31 O
ATOM 5 O5' A A 6 36.941 36.966 -24.401 1.00 48.93 O
ATOM 6 C5' A A 6 37.340 37.975 -23.462 1.00 42.57 C
ATOM 7 C4' A A 6 38.392 38.881 -24.047 1.00 36.75 C
ATOM 8 O4' A A 6 39.653 38.180 -24.263 1.00 39.47 O
ATOM 9 C3' A A 6 37.992 39.422 -25.408 1.00 31.99 C
ATOM 10 O3' A A 6 38.476 40.767 -25.641 1.00 31.56 O
ATOM 11 C2' A A 6 38.728 38.516 -26.382 1.00 33.30 C
ATOM 12 O2' A A 6 38.959 39.232 -27.587 1.00 27.09 O
ATOM 13 C1' A A 6 40.011 38.267 -25.641 1.00 39.85 C
ATOM 14 N9 A A 6 40.725 37.054 -26.097 1.00 47.26 N
ATOM 15 C8 A A 6 40.515 35.753 -25.753 1.00 49.13 C
ATOM 16 N7 A A 6 41.356 34.905 -26.313 1.00 52.05 N
ATOM 17 C5 A A 6 42.176 35.724 -27.062 1.00 51.37 C
ATOM 18 C6 A A 6 43.290 35.432 -27.898 1.00 52.62 C
ATOM 19 N6 A A 6 43.732 34.204 -28.113 1.00 54.06 N
ATOM 20 N1 A A 6 43.900 36.499 -28.509 1.00 55.23 N
ATOM 21 C2 A A 6 43.417 37.741 -28.285 1.00 55.23 C
ATOM 22 N3 A A 6 42.386 38.107 -27.527 1.00 54.51 N
ATOM 23 C4 A A 6 41.819 37.039 -26.941 1.00 51.05 C
ATOM 24 P U A 7 37.719 42.082 -25.124 1.00 30.13 P
ATOM 25 OP1 U A 7 38.455 43.310 -25.598 1.00 30.85 O
ATOM 26 OP2 U A 7 37.614 41.936 -23.651 1.00 20.93 O
ATOM 27 O5' U A 7 36.310 42.024 -25.830 1.00 31.69 O
TER

ATOM 1 O3' A B 6 38.476 40.767 -25.641 1.00 31.56 O
ATOM 2 P U B 7 37.719 42.082 -25.124 1.00 30.13 P
ATOM 3 OP1 U B 7 38.455 43.310 -25.598 1.00 30.85 O
ATOM 4 OP2 U B 7 37.614 41.936 -23.651 1.00 20.93 O
ATOM 5 O5' U B 7 36.310 42.024 -25.830 1.00 31.69 O
ATOM 6 C5' U B 7 36.247 42.112 -27.277 1.00 34.46 C
ATOM 7 C4' U B 7 34.838 42.462 -27.699 1.00 34.92 C
ATOM 8 O4' U B 7 33.892 41.483 -27.200 1.00 32.94 O
ATOM 9 C3' U B 7 34.397 43.734 -27.028 1.00 34.01 C
ATOM 10 O3' U B 7 34.817 44.918 -27.725 1.00 34.27 O
ATOM 11 C2' U B 7 32.883 43.617 -27.028 1.00 30.15 C
ATOM 12 O2' U B 7 32.421 43.895 -28.337 1.00 26.24 O
ATOM 13 C1' U B 7 32.694 42.141 -26.786 1.00 25.83 C
ATOM 14 N1 U B 7 32.484 41.848 -25.357 1.00 23.09 N
ATOM 15 C2 U B 7 31.180 41.907 -24.909 1.00 24.95 C
ATOM 16 O2 U B 7 30.276 42.229 -25.658 1.00 32.19 O
ATOM 17 N3 U B 7 30.970 41.556 -23.608 1.00 22.39 N
ATOM 18 C4 U B 7 31.916 41.161 -22.712 1.00 23.24 C
ATOM 19 O4 U B 7 31.601 40.869 -21.541 1.00 27.06 O
ATOM 20 C5 U B 7 33.241 41.132 -23.238 1.00 25.76 C
ATOM 21 C6 U B 7 33.493 41.468 -24.521 1.00 23.64 C
ATOM 22 P A B 8 35.196 46.190 -26.829 1.00 33.66 P
ATOM 23 OP1 A B 8 36.058 46.964 -27.777 1.00 34.28 O
ATOM 24 OP2 A B 8 35.806 45.751 -25.546 1.00 27.86 O
ATOM 25 O5' A B 8 33.892 47.038 -26.459 1.00 39.65 O
TER

Atoms:
OP1: (35.007,35.724,-23.436)
OP2: (36.626,34.555,-24.935)
C3': (37.992,39.422,-25.408)
C1': (40.011,38.267,-25.641)
C5': (37.340,37.975,-23.462)
O4': (39.653,38.180,-24.263)
C8: (40.515,35.753,-25.753)
O2': (38.959,39.232,-27.587)
C6: (43.290,35.432,-27.898)
C5: (42.176,35.724,-27.062)
C4: (41.819,37.039,-26.941)
P: (36.415,35.563,-23.867)
C4': (38.392,38.881,-24.047)
C2': (38.728,38.516,-26.382)
C2: (43.417,37.741,-28.285)
N1: (43.900,36.499,-28.509)
N3: (42.386,38.107,-27.527)
N6: (43.732,34.204,-28.113)
N7: (41.356,34.905,-26.313)
N9: (40.725,37.054,-26.097)
O5': (36.941,36.966,-24.401)
O3': (38.476,40.767,-25.641)
C4: (31.916,41.161,-22.712)
N3: (30.970,41.556,-23.608)
OP1: (38.455,43.310,-25.598)
OP2: (37.614,41.936,-23.651)
C2: (31.180,41.907,-24.909)
C1': (32.694,42.141,-26.786)
C3': (34.397,43.734,-27.028)
O5': (36.310,42.024,-25.830)
O4': (33.892,41.483,-27.200)
C5': (36.247,42.112,-27.277)
P: (37.719,42.082,-25.124)
C4': (34.838,42.462,-27.699)
C2': (32.883,43.617,-27.028)
O2': (32.421,43.895,-28.337)
N1: (32.484,41.848,-25.357)
O4: (31.601,40.869,-21.541)
O2: (30.276,42.229,-25.658)
C6: (33.493,41.468,-24.521)
C5: (33.241,41.132,-23.238)
O3': (34.817,44.918,-27.725)
Image (generated by PyMOL):
PyMOL image
show in jmol