Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1GTR:B5:B6
Extra
PDB:
ATOM 1 O3' U A 4 28.862 33.245 28.040 1.00 18.60 O
ATOM 2 P A A 5 27.304 33.161 28.426 1.00 21.45 P
ATOM 3 OP1 A A 5 26.650 32.497 27.280 1.00 20.70 O
ATOM 4 OP2 A A 5 26.720 34.388 29.006 1.00 22.82 O
ATOM 5 O5' A A 5 27.504 32.098 29.604 1.00 22.30 O
ATOM 6 C5' A A 5 26.456 31.773 30.505 1.00 23.91 C
ATOM 7 C4' A A 5 26.974 30.801 31.554 1.00 25.41 C
ATOM 8 O4' A A 5 27.995 31.458 32.317 1.00 25.94 O
ATOM 9 C3' A A 5 25.906 30.388 32.555 1.00 25.66 C
ATOM 10 O3' A A 5 26.300 29.157 33.174 1.00 25.14 O
ATOM 11 C2' A A 5 25.984 31.523 33.541 1.00 25.79 C
ATOM 12 O2' A A 5 25.507 31.103 34.823 1.00 28.34 O
ATOM 13 C1' A A 5 27.470 31.788 33.607 1.00 25.24 C
ATOM 14 N9 A A 5 27.677 33.203 33.903 1.00 23.73 N
ATOM 15 C8 A A 5 27.598 34.279 33.061 1.00 23.10 C
ATOM 16 N7 A A 5 27.821 35.418 33.647 1.00 23.93 N
ATOM 17 C5 A A 5 28.064 35.066 34.967 1.00 23.46 C
ATOM 18 C6 A A 5 28.361 35.823 36.094 1.00 24.01 C
ATOM 19 N6 A A 5 28.472 37.146 36.049 1.00 25.21 N
ATOM 20 N1 A A 5 28.539 35.166 37.246 1.00 24.98 N
ATOM 21 C2 A A 5 28.428 33.845 37.267 1.00 25.30 C
ATOM 22 N3 A A 5 28.153 33.015 36.277 1.00 24.45 N
ATOM 23 C4 A A 5 27.979 33.715 35.134 1.00 24.31 C
ATOM 24 P U A 6 26.050 27.764 32.413 1.00 26.62 P
ATOM 25 OP1 U A 6 26.488 27.271 33.738 1.00 27.62 O
ATOM 26 OP2 U A 6 26.503 27.068 31.193 1.00 27.76 O
ATOM 27 O5' U A 6 24.439 27.793 32.386 1.00 24.76 O
TER
ATOM 1 O3' A B 5 26.300 29.157 33.174 1.00 25.14 O
ATOM 2 P U B 6 26.050 27.764 32.413 1.00 26.62 P
ATOM 3 OP1 U B 6 26.488 27.271 33.738 1.00 27.62 O
ATOM 4 OP2 U B 6 26.503 27.068 31.193 1.00 27.76 O
ATOM 5 O5' U B 6 24.439 27.793 32.386 1.00 24.76 O
ATOM 6 C5' U B 6 23.617 27.724 33.557 1.00 23.72 C
ATOM 7 C4' U B 6 22.197 27.404 33.173 1.00 24.36 C
ATOM 8 O4' U B 6 21.713 28.275 32.137 1.00 23.97 O
ATOM 9 C3' U B 6 22.151 26.066 32.498 1.00 26.29 C
ATOM 10 O3' U B 6 22.200 24.989 33.430 1.00 30.31 O
ATOM 11 C2' U B 6 20.828 26.108 31.816 1.00 24.90 C
ATOM 12 O2' U B 6 19.762 26.066 32.768 1.00 24.92 O
ATOM 13 C1' U B 6 20.919 27.500 31.212 1.00 24.74 C
ATOM 14 N1 U B 6 21.523 27.399 29.836 1.00 24.90 N
ATOM 15 C2 U B 6 20.707 26.934 28.812 1.00 25.89 C
ATOM 16 O2 U B 6 19.524 26.631 28.975 1.00 26.39 O
ATOM 17 N3 U B 6 21.293 26.860 27.553 1.00 25.29 N
ATOM 18 C4 U B 6 22.588 27.200 27.206 1.00 22.83 C
ATOM 19 O4 U B 6 22.980 27.091 26.039 1.00 19.53 O
ATOM 20 C5 U B 6 23.359 27.672 28.330 1.00 22.77 C
ATOM 21 C6 U B 6 22.822 27.753 29.568 1.00 23.67 C
ATOM 22 P C B 7 23.135 23.744 33.020 1.00 34.29 P
ATOM 23 OP1 C B 7 24.024 24.098 34.154 1.00 34.73 O
ATOM 24 OP2 C B 7 23.674 23.697 31.639 1.00 34.17 O
ATOM 25 O5' C B 7 22.449 22.329 33.344 1.00 35.19 O
TER
ATOM 2 P A A 5 27.304 33.161 28.426 1.00 21.45 P
ATOM 3 OP1 A A 5 26.650 32.497 27.280 1.00 20.70 O
ATOM 4 OP2 A A 5 26.720 34.388 29.006 1.00 22.82 O
ATOM 5 O5' A A 5 27.504 32.098 29.604 1.00 22.30 O
ATOM 6 C5' A A 5 26.456 31.773 30.505 1.00 23.91 C
ATOM 7 C4' A A 5 26.974 30.801 31.554 1.00 25.41 C
ATOM 8 O4' A A 5 27.995 31.458 32.317 1.00 25.94 O
ATOM 9 C3' A A 5 25.906 30.388 32.555 1.00 25.66 C
ATOM 10 O3' A A 5 26.300 29.157 33.174 1.00 25.14 O
ATOM 11 C2' A A 5 25.984 31.523 33.541 1.00 25.79 C
ATOM 12 O2' A A 5 25.507 31.103 34.823 1.00 28.34 O
ATOM 13 C1' A A 5 27.470 31.788 33.607 1.00 25.24 C
ATOM 14 N9 A A 5 27.677 33.203 33.903 1.00 23.73 N
ATOM 15 C8 A A 5 27.598 34.279 33.061 1.00 23.10 C
ATOM 16 N7 A A 5 27.821 35.418 33.647 1.00 23.93 N
ATOM 17 C5 A A 5 28.064 35.066 34.967 1.00 23.46 C
ATOM 18 C6 A A 5 28.361 35.823 36.094 1.00 24.01 C
ATOM 19 N6 A A 5 28.472 37.146 36.049 1.00 25.21 N
ATOM 20 N1 A A 5 28.539 35.166 37.246 1.00 24.98 N
ATOM 21 C2 A A 5 28.428 33.845 37.267 1.00 25.30 C
ATOM 22 N3 A A 5 28.153 33.015 36.277 1.00 24.45 N
ATOM 23 C4 A A 5 27.979 33.715 35.134 1.00 24.31 C
ATOM 24 P U A 6 26.050 27.764 32.413 1.00 26.62 P
ATOM 25 OP1 U A 6 26.488 27.271 33.738 1.00 27.62 O
ATOM 26 OP2 U A 6 26.503 27.068 31.193 1.00 27.76 O
ATOM 27 O5' U A 6 24.439 27.793 32.386 1.00 24.76 O
TER
ATOM 1 O3' A B 5 26.300 29.157 33.174 1.00 25.14 O
ATOM 2 P U B 6 26.050 27.764 32.413 1.00 26.62 P
ATOM 3 OP1 U B 6 26.488 27.271 33.738 1.00 27.62 O
ATOM 4 OP2 U B 6 26.503 27.068 31.193 1.00 27.76 O
ATOM 5 O5' U B 6 24.439 27.793 32.386 1.00 24.76 O
ATOM 6 C5' U B 6 23.617 27.724 33.557 1.00 23.72 C
ATOM 7 C4' U B 6 22.197 27.404 33.173 1.00 24.36 C
ATOM 8 O4' U B 6 21.713 28.275 32.137 1.00 23.97 O
ATOM 9 C3' U B 6 22.151 26.066 32.498 1.00 26.29 C
ATOM 10 O3' U B 6 22.200 24.989 33.430 1.00 30.31 O
ATOM 11 C2' U B 6 20.828 26.108 31.816 1.00 24.90 C
ATOM 12 O2' U B 6 19.762 26.066 32.768 1.00 24.92 O
ATOM 13 C1' U B 6 20.919 27.500 31.212 1.00 24.74 C
ATOM 14 N1 U B 6 21.523 27.399 29.836 1.00 24.90 N
ATOM 15 C2 U B 6 20.707 26.934 28.812 1.00 25.89 C
ATOM 16 O2 U B 6 19.524 26.631 28.975 1.00 26.39 O
ATOM 17 N3 U B 6 21.293 26.860 27.553 1.00 25.29 N
ATOM 18 C4 U B 6 22.588 27.200 27.206 1.00 22.83 C
ATOM 19 O4 U B 6 22.980 27.091 26.039 1.00 19.53 O
ATOM 20 C5 U B 6 23.359 27.672 28.330 1.00 22.77 C
ATOM 21 C6 U B 6 22.822 27.753 29.568 1.00 23.67 C
ATOM 22 P C B 7 23.135 23.744 33.020 1.00 34.29 P
ATOM 23 OP1 C B 7 24.024 24.098 34.154 1.00 34.73 O
ATOM 24 OP2 C B 7 23.674 23.697 31.639 1.00 34.17 O
ATOM 25 O5' C B 7 22.449 22.329 33.344 1.00 35.19 O
TER
Atoms:
OP1: (26.650,32.497,27.280)
OP2: (26.720,34.388,29.006)
C3': (25.906,30.388,32.555)
C1': (27.470,31.788,33.607)
C5': (26.456,31.773,30.505)
O4': (27.995,31.458,32.317)
C8: (27.598,34.279,33.061)
O2': (25.507,31.103,34.823)
C6: (28.361,35.823,36.094)
C5: (28.064,35.066,34.967)
C4: (27.979,33.715,35.134)
P: (27.304,33.161,28.426)
C4': (26.974,30.801,31.554)
C2': (25.984,31.523,33.541)
C2: (28.428,33.845,37.267)
N1: (28.539,35.166,37.246)
N3: (28.153,33.015,36.277)
N6: (28.472,37.146,36.049)
N7: (27.821,35.418,33.647)
N9: (27.677,33.203,33.903)
O5': (27.504,32.098,29.604)
O3': (26.300,29.157,33.174)
OP2: (26.720,34.388,29.006)
C3': (25.906,30.388,32.555)
C1': (27.470,31.788,33.607)
C5': (26.456,31.773,30.505)
O4': (27.995,31.458,32.317)
C8: (27.598,34.279,33.061)
O2': (25.507,31.103,34.823)
C6: (28.361,35.823,36.094)
C5: (28.064,35.066,34.967)
C4: (27.979,33.715,35.134)
P: (27.304,33.161,28.426)
C4': (26.974,30.801,31.554)
C2': (25.984,31.523,33.541)
C2: (28.428,33.845,37.267)
N1: (28.539,35.166,37.246)
N3: (28.153,33.015,36.277)
N6: (28.472,37.146,36.049)
N7: (27.821,35.418,33.647)
N9: (27.677,33.203,33.903)
O5': (27.504,32.098,29.604)
O3': (26.300,29.157,33.174)
C4: (22.588,27.200,27.206)
N3: (21.293,26.860,27.553)
OP1: (26.488,27.271,33.738)
OP2: (26.503,27.068,31.193)
C2: (20.707,26.934,28.812)
C1': (20.919,27.500,31.212)
C3': (22.151,26.066,32.498)
O5': (24.439,27.793,32.386)
O4': (21.713,28.275,32.137)
C5': (23.617,27.724,33.557)
P: (26.050,27.764,32.413)
C4': (22.197,27.404,33.173)
C2': (20.828,26.108,31.816)
O2': (19.762,26.066,32.768)
N1: (21.523,27.399,29.836)
O4: (22.980,27.091,26.039)
O2: (19.524,26.631,28.975)
C6: (22.822,27.753,29.568)
C5: (23.359,27.672,28.330)
O3': (22.200,24.989,33.430)
N3: (21.293,26.860,27.553)
OP1: (26.488,27.271,33.738)
OP2: (26.503,27.068,31.193)
C2: (20.707,26.934,28.812)
C1': (20.919,27.500,31.212)
C3': (22.151,26.066,32.498)
O5': (24.439,27.793,32.386)
O4': (21.713,28.275,32.137)
C5': (23.617,27.724,33.557)
P: (26.050,27.764,32.413)
C4': (22.197,27.404,33.173)
C2': (20.828,26.108,31.816)
O2': (19.762,26.066,32.768)
N1: (21.523,27.399,29.836)
O4: (22.980,27.091,26.039)
O2: (19.524,26.631,28.975)
C6: (22.822,27.753,29.568)
C5: (23.359,27.672,28.330)
O3': (22.200,24.989,33.430)
Image (generated by PyMOL):