ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZZM:B8:B9

Extra

PDB:
ATOM 1 O3' U A 7 17.472 -35.970 -14.564 1.00 68.62 O
ATOM 2 P C A 8 18.273 -34.574 -14.443 1.00 63.28 P
ATOM 3 OP1 C A 8 18.558 -34.354 -13.003 1.00 59.63 O
ATOM 4 OP2 C A 8 17.569 -33.528 -15.226 1.00 61.61 O
ATOM 5 O5' C A 8 19.659 -34.862 -15.165 1.00 62.13 O
ATOM 6 C5' C A 8 20.784 -35.284 -14.413 1.00 68.27 C
ATOM 7 C4' C A 8 22.052 -34.907 -15.128 1.00 67.91 C
ATOM 8 O4' C A 8 22.230 -35.755 -16.293 1.00 56.75 O
ATOM 9 C3' C A 8 22.083 -33.477 -15.646 1.00 66.11 C
ATOM 10 O3' C A 8 22.591 -32.600 -14.629 1.00 69.99 O
ATOM 11 C2' C A 8 23.069 -33.599 -16.804 1.00 60.38 C
ATOM 12 O2' C A 8 24.402 -33.602 -16.353 1.00 59.17 O
ATOM 13 C1' C A 8 22.730 -34.986 -17.365 1.00 60.76 C
ATOM 14 N1 C A 8 21.688 -34.942 -18.401 1.00 61.14 N
ATOM 15 C2 C A 8 22.027 -34.523 -19.692 1.00 58.29 C
ATOM 16 O2 C A 8 23.219 -34.216 -19.934 1.00 51.96 O
ATOM 17 N3 C A 8 21.052 -34.448 -20.637 1.00 48.26 N
ATOM 18 C4 C A 8 19.791 -34.738 -20.314 1.00 51.97 C
ATOM 19 N4 C A 8 18.850 -34.569 -21.239 1.00 54.11 N
ATOM 20 C5 C A 8 19.431 -35.192 -19.017 1.00 58.26 C
ATOM 21 C6 C A 8 20.401 -35.288 -18.103 1.00 56.70 C
ATOM 22 P G A 9 21.635 -31.497 -13.928 1.00 62.81 P
ATOM 23 OP1 G A 9 20.577 -32.223 -13.160 1.00 47.49 O
ATOM 24 OP2 G A 9 21.243 -30.487 -14.948 1.00 50.69 O
ATOM 25 O5' G A 9 22.629 -30.764 -12.914 1.00 40.27 O
TER

ATOM 1 O3' C B 8 22.591 -32.600 -14.629 1.00 69.99 O
ATOM 2 P G B 9 21.635 -31.497 -13.928 1.00 62.81 P
ATOM 3 OP1 G B 9 20.577 -32.223 -13.160 1.00 47.49 O
ATOM 4 OP2 G B 9 21.243 -30.487 -14.948 1.00 50.69 O
ATOM 5 O5' G B 9 22.629 -30.764 -12.914 1.00 40.27 O
ATOM 6 C5' G B 9 22.565 -30.951 -11.497 1.00 47.26 C
ATOM 7 C4' G B 9 22.622 -29.599 -10.802 1.00 45.20 C
ATOM 8 O4' G B 9 23.711 -28.824 -11.387 1.00 57.87 O
ATOM 9 C3' G B 9 21.376 -28.747 -10.988 1.00 44.44 C
ATOM 10 O3' G B 9 20.537 -28.897 -9.857 1.00 41.91 O
ATOM 11 C2' G B 9 21.925 -27.323 -11.030 1.00 47.58 C
ATOM 12 O2' G B 9 22.164 -26.785 -9.762 1.00 52.97 O
ATOM 13 C1' G B 9 23.265 -27.522 -11.727 1.00 45.36 C
ATOM 14 N9 G B 9 23.194 -27.459 -13.186 1.00 54.38 N
ATOM 15 C8 G B 9 23.836 -28.306 -14.039 1.00 38.16 C
ATOM 16 N7 G B 9 23.629 -28.024 -15.294 1.00 60.56 N
ATOM 17 C5 G B 9 22.798 -26.918 -15.270 1.00 44.59 C
ATOM 18 C6 G B 9 22.262 -26.170 -16.331 1.00 39.67 C
ATOM 19 O6 G B 9 22.430 -26.333 -17.533 1.00 33.38 O
ATOM 20 N1 G B 9 21.456 -25.140 -15.876 1.00 46.60 N
ATOM 21 C2 G B 9 21.200 -24.872 -14.561 1.00 37.00 C
ATOM 22 N2 G B 9 20.375 -23.867 -14.328 1.00 42.18 N
ATOM 23 N3 G B 9 21.712 -25.552 -13.555 1.00 46.99 N
ATOM 24 C4 G B 9 22.501 -26.560 -13.980 1.00 43.56 C
ATOM 25 P C B 10 19.085 -29.543 -10.014 1.00 45.26 P
ATOM 26 OP1 C B 10 18.693 -30.125 -8.704 1.00 41.68 O
ATOM 27 OP2 C B 10 19.164 -30.400 -11.222 1.00 36.42 O
ATOM 28 O5' C B 10 18.107 -28.329 -10.347 1.00 48.54 O
TER

Atoms:
C2: (22.027,-34.523,-19.692)
OP1: (18.558,-34.354,-13.003)
OP2: (17.569,-33.528,-15.226)
C4: (19.791,-34.738,-20.314)
O5': (19.659,-34.862,-15.165)
C3': (22.083,-33.477,-15.646)
C1': (22.730,-34.986,-17.365)
O4': (22.230,-35.755,-16.293)
C5': (20.784,-35.284,-14.413)
P: (18.273,-34.574,-14.443)
O2: (23.219,-34.216,-19.934)
C4': (22.052,-34.907,-15.128)
C2': (23.069,-33.599,-16.804)
O2': (24.402,-33.602,-16.353)
N1: (21.688,-34.942,-18.401)
N3: (21.052,-34.448,-20.637)
N4: (18.850,-34.569,-21.239)
C6: (20.401,-35.288,-18.103)
C5: (19.431,-35.192,-19.017)
O3': (22.591,-32.600,-14.629)
OP1: (20.577,-32.223,-13.160)
OP2: (21.243,-30.487,-14.948)
C3': (21.376,-28.747,-10.988)
C1': (23.265,-27.522,-11.727)
C5': (22.565,-30.951,-11.497)
O6: (22.430,-26.333,-17.533)
O4': (23.711,-28.824,-11.387)
C8: (23.836,-28.306,-14.039)
C2: (21.200,-24.872,-14.561)
C6: (22.262,-26.170,-16.331)
C5: (22.798,-26.918,-15.270)
C4: (22.501,-26.560,-13.980)
P: (21.635,-31.497,-13.928)
C4': (22.622,-29.599,-10.802)
C2': (21.925,-27.323,-11.030)
O2': (22.164,-26.785,-9.762)
N1: (21.456,-25.140,-15.876)
N2: (20.375,-23.867,-14.328)
N3: (21.712,-25.552,-13.555)
N7: (23.629,-28.024,-15.294)
N9: (23.194,-27.459,-13.186)
O5': (22.629,-30.764,-12.914)
O3': (20.537,-28.897,-9.857)
Image (generated by PyMOL):
PyMOL image
show in jmol