Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U0B:A20:A12
Extra
PDB:
ATOM 1 O3' U A 19 68.525 54.035 -7.360 1.00 64.73 O
ATOM 2 P A A 20 68.885 53.108 -6.100 1.00 60.08 P
ATOM 3 OP1 A A 20 67.579 52.578 -5.612 1.00 63.26 O
ATOM 4 OP2 A A 20 69.756 53.882 -5.175 1.00 61.15 O
ATOM 5 O5' A A 20 69.736 51.894 -6.707 1.00 58.69 O
ATOM 6 C5' A A 20 69.177 50.986 -7.679 1.00 47.57 C
ATOM 7 C4' A A 20 70.278 50.161 -8.319 1.00 42.11 C
ATOM 8 O4' A A 20 70.876 49.305 -7.302 1.00 41.79 O
ATOM 9 C3' A A 20 69.842 49.178 -9.401 1.00 39.79 C
ATOM 10 O3' A A 20 69.717 49.780 -10.688 1.00 34.89 O
ATOM 11 C2' A A 20 70.976 48.163 -9.383 1.00 38.57 C
ATOM 12 O2' A A 20 72.135 48.636 -10.048 1.00 33.85 O
ATOM 13 C1' A A 20 71.254 48.063 -7.882 1.00 39.35 C
ATOM 14 N9 A A 20 70.510 46.982 -7.225 1.00 42.73 N
ATOM 15 C8 A A 20 69.503 47.066 -6.292 1.00 41.43 C
ATOM 16 N7 A A 20 69.079 45.902 -5.866 1.00 43.53 N
ATOM 17 C5 A A 20 69.850 44.989 -6.572 1.00 41.36 C
ATOM 18 C6 A A 20 69.903 43.585 -6.566 1.00 41.40 C
ATOM 19 N6 A A 20 69.142 42.807 -5.791 1.00 36.64 N
ATOM 20 N1 A A 20 70.784 42.992 -7.394 1.00 44.17 N
ATOM 21 C2 A A 20 71.556 43.760 -8.167 1.00 39.41 C
ATOM 22 N3 A A 20 71.603 45.077 -8.262 1.00 39.01 N
ATOM 23 C4 A A 20 70.719 45.641 -7.426 1.00 40.53 C
ATOM 24 P U A 21 68.345 49.613 -11.493 1.00 36.09 P
ATOM 25 OP1 U A 21 68.480 50.236 -12.841 1.00 38.48 O
ATOM 26 OP2 U A 21 67.264 50.062 -10.577 1.00 38.27 O
ATOM 27 O5' U A 21 68.170 48.041 -11.667 1.00 35.45 O
TER
ATOM 1 O3' A B 11 63.878 36.714 -0.973 1.00 46.58 O
ATOM 2 P A B 12 65.139 36.940 -0.008 1.00 49.60 P
ATOM 3 OP1 A B 12 65.635 35.589 0.376 1.00 49.39 O
ATOM 4 OP2 A B 12 64.715 37.892 1.048 1.00 47.89 O
ATOM 5 O5' A B 12 66.211 37.642 -0.960 1.00 48.94 O
ATOM 6 C5' A B 12 66.629 37.020 -2.185 1.00 44.84 C
ATOM 7 C4' A B 12 67.535 37.948 -2.975 1.00 42.96 C
ATOM 8 O4' A B 12 66.765 39.082 -3.452 1.00 43.11 O
ATOM 9 C3' A B 12 68.715 38.537 -2.206 1.00 40.83 C
ATOM 10 O3' A B 12 69.851 37.661 -2.280 1.00 37.42 O
ATOM 11 C2' A B 12 68.951 39.872 -2.909 1.00 41.28 C
ATOM 12 O2' A B 12 69.762 39.760 -4.061 1.00 41.48 O
ATOM 13 C1' A B 12 67.527 40.268 -3.317 1.00 42.95 C
ATOM 14 N9 A B 12 66.820 41.151 -2.386 1.00 43.83 N
ATOM 15 C8 A B 12 66.001 40.791 -1.336 1.00 44.03 C
ATOM 16 N7 A B 12 65.487 41.811 -0.694 1.00 42.79 N
ATOM 17 C5 A B 12 66.006 42.918 -1.359 1.00 42.55 C
ATOM 18 C6 A B 12 65.840 44.308 -1.168 1.00 41.25 C
ATOM 19 N6 A B 12 65.098 44.837 -0.195 1.00 42.34 N
ATOM 20 N1 A B 12 66.478 45.143 -2.019 1.00 39.38 N
ATOM 21 C2 A B 12 67.237 44.611 -2.983 1.00 43.67 C
ATOM 22 N3 A B 12 67.480 43.328 -3.259 1.00 42.56 N
ATOM 23 C4 A B 12 66.828 42.524 -2.401 1.00 42.77 C
ATOM 24 P A B 13 71.219 38.035 -1.503 1.00 36.90 P
ATOM 25 OP1 A B 13 72.010 36.784 -1.449 1.00 37.55 O
ATOM 26 OP2 A B 13 70.925 38.764 -0.240 1.00 40.09 O
ATOM 27 O5' A B 13 71.937 39.068 -2.478 1.00 34.69 O
TER
ATOM 2 P A A 20 68.885 53.108 -6.100 1.00 60.08 P
ATOM 3 OP1 A A 20 67.579 52.578 -5.612 1.00 63.26 O
ATOM 4 OP2 A A 20 69.756 53.882 -5.175 1.00 61.15 O
ATOM 5 O5' A A 20 69.736 51.894 -6.707 1.00 58.69 O
ATOM 6 C5' A A 20 69.177 50.986 -7.679 1.00 47.57 C
ATOM 7 C4' A A 20 70.278 50.161 -8.319 1.00 42.11 C
ATOM 8 O4' A A 20 70.876 49.305 -7.302 1.00 41.79 O
ATOM 9 C3' A A 20 69.842 49.178 -9.401 1.00 39.79 C
ATOM 10 O3' A A 20 69.717 49.780 -10.688 1.00 34.89 O
ATOM 11 C2' A A 20 70.976 48.163 -9.383 1.00 38.57 C
ATOM 12 O2' A A 20 72.135 48.636 -10.048 1.00 33.85 O
ATOM 13 C1' A A 20 71.254 48.063 -7.882 1.00 39.35 C
ATOM 14 N9 A A 20 70.510 46.982 -7.225 1.00 42.73 N
ATOM 15 C8 A A 20 69.503 47.066 -6.292 1.00 41.43 C
ATOM 16 N7 A A 20 69.079 45.902 -5.866 1.00 43.53 N
ATOM 17 C5 A A 20 69.850 44.989 -6.572 1.00 41.36 C
ATOM 18 C6 A A 20 69.903 43.585 -6.566 1.00 41.40 C
ATOM 19 N6 A A 20 69.142 42.807 -5.791 1.00 36.64 N
ATOM 20 N1 A A 20 70.784 42.992 -7.394 1.00 44.17 N
ATOM 21 C2 A A 20 71.556 43.760 -8.167 1.00 39.41 C
ATOM 22 N3 A A 20 71.603 45.077 -8.262 1.00 39.01 N
ATOM 23 C4 A A 20 70.719 45.641 -7.426 1.00 40.53 C
ATOM 24 P U A 21 68.345 49.613 -11.493 1.00 36.09 P
ATOM 25 OP1 U A 21 68.480 50.236 -12.841 1.00 38.48 O
ATOM 26 OP2 U A 21 67.264 50.062 -10.577 1.00 38.27 O
ATOM 27 O5' U A 21 68.170 48.041 -11.667 1.00 35.45 O
TER
ATOM 1 O3' A B 11 63.878 36.714 -0.973 1.00 46.58 O
ATOM 2 P A B 12 65.139 36.940 -0.008 1.00 49.60 P
ATOM 3 OP1 A B 12 65.635 35.589 0.376 1.00 49.39 O
ATOM 4 OP2 A B 12 64.715 37.892 1.048 1.00 47.89 O
ATOM 5 O5' A B 12 66.211 37.642 -0.960 1.00 48.94 O
ATOM 6 C5' A B 12 66.629 37.020 -2.185 1.00 44.84 C
ATOM 7 C4' A B 12 67.535 37.948 -2.975 1.00 42.96 C
ATOM 8 O4' A B 12 66.765 39.082 -3.452 1.00 43.11 O
ATOM 9 C3' A B 12 68.715 38.537 -2.206 1.00 40.83 C
ATOM 10 O3' A B 12 69.851 37.661 -2.280 1.00 37.42 O
ATOM 11 C2' A B 12 68.951 39.872 -2.909 1.00 41.28 C
ATOM 12 O2' A B 12 69.762 39.760 -4.061 1.00 41.48 O
ATOM 13 C1' A B 12 67.527 40.268 -3.317 1.00 42.95 C
ATOM 14 N9 A B 12 66.820 41.151 -2.386 1.00 43.83 N
ATOM 15 C8 A B 12 66.001 40.791 -1.336 1.00 44.03 C
ATOM 16 N7 A B 12 65.487 41.811 -0.694 1.00 42.79 N
ATOM 17 C5 A B 12 66.006 42.918 -1.359 1.00 42.55 C
ATOM 18 C6 A B 12 65.840 44.308 -1.168 1.00 41.25 C
ATOM 19 N6 A B 12 65.098 44.837 -0.195 1.00 42.34 N
ATOM 20 N1 A B 12 66.478 45.143 -2.019 1.00 39.38 N
ATOM 21 C2 A B 12 67.237 44.611 -2.983 1.00 43.67 C
ATOM 22 N3 A B 12 67.480 43.328 -3.259 1.00 42.56 N
ATOM 23 C4 A B 12 66.828 42.524 -2.401 1.00 42.77 C
ATOM 24 P A B 13 71.219 38.035 -1.503 1.00 36.90 P
ATOM 25 OP1 A B 13 72.010 36.784 -1.449 1.00 37.55 O
ATOM 26 OP2 A B 13 70.925 38.764 -0.240 1.00 40.09 O
ATOM 27 O5' A B 13 71.937 39.068 -2.478 1.00 34.69 O
TER
Atoms:
OP1: (67.579,52.578,-5.612)
OP2: (69.756,53.882,-5.175)
C3': (69.842,49.178,-9.401)
C1': (71.254,48.063,-7.882)
C5': (69.177,50.986,-7.679)
O4': (70.876,49.305,-7.302)
C8: (69.503,47.066,-6.292)
O2': (72.135,48.636,-10.048)
C6: (69.903,43.585,-6.566)
C5: (69.850,44.989,-6.572)
C4: (70.719,45.641,-7.426)
P: (68.885,53.108,-6.100)
C4': (70.278,50.161,-8.319)
C2': (70.976,48.163,-9.383)
C2: (71.556,43.760,-8.167)
N1: (70.784,42.992,-7.394)
N3: (71.603,45.077,-8.262)
N6: (69.142,42.807,-5.791)
N7: (69.079,45.902,-5.866)
N9: (70.510,46.982,-7.225)
O5': (69.736,51.894,-6.707)
O3': (69.717,49.780,-10.688)
OP2: (69.756,53.882,-5.175)
C3': (69.842,49.178,-9.401)
C1': (71.254,48.063,-7.882)
C5': (69.177,50.986,-7.679)
O4': (70.876,49.305,-7.302)
C8: (69.503,47.066,-6.292)
O2': (72.135,48.636,-10.048)
C6: (69.903,43.585,-6.566)
C5: (69.850,44.989,-6.572)
C4: (70.719,45.641,-7.426)
P: (68.885,53.108,-6.100)
C4': (70.278,50.161,-8.319)
C2': (70.976,48.163,-9.383)
C2: (71.556,43.760,-8.167)
N1: (70.784,42.992,-7.394)
N3: (71.603,45.077,-8.262)
N6: (69.142,42.807,-5.791)
N7: (69.079,45.902,-5.866)
N9: (70.510,46.982,-7.225)
O5': (69.736,51.894,-6.707)
O3': (69.717,49.780,-10.688)
OP1: (65.635,35.589,0.376)
OP2: (64.715,37.892,1.048)
C3': (68.715,38.537,-2.206)
C1': (67.527,40.268,-3.317)
C5': (66.629,37.020,-2.185)
O4': (66.765,39.082,-3.452)
C8: (66.001,40.791,-1.336)
O2': (69.762,39.760,-4.061)
C6: (65.840,44.308,-1.168)
C5: (66.006,42.918,-1.359)
C4: (66.828,42.524,-2.401)
P: (65.139,36.940,-0.008)
C4': (67.535,37.948,-2.975)
C2': (68.951,39.872,-2.909)
C2: (67.237,44.611,-2.983)
N1: (66.478,45.143,-2.019)
N3: (67.480,43.328,-3.259)
N6: (65.098,44.837,-0.195)
N7: (65.487,41.811,-0.694)
N9: (66.820,41.151,-2.386)
O5': (66.211,37.642,-0.960)
O3': (69.851,37.661,-2.280)
OP2: (64.715,37.892,1.048)
C3': (68.715,38.537,-2.206)
C1': (67.527,40.268,-3.317)
C5': (66.629,37.020,-2.185)
O4': (66.765,39.082,-3.452)
C8: (66.001,40.791,-1.336)
O2': (69.762,39.760,-4.061)
C6: (65.840,44.308,-1.168)
C5: (66.006,42.918,-1.359)
C4: (66.828,42.524,-2.401)
P: (65.139,36.940,-0.008)
C4': (67.535,37.948,-2.975)
C2': (68.951,39.872,-2.909)
C2: (67.237,44.611,-2.983)
N1: (66.478,45.143,-2.019)
N3: (67.480,43.328,-3.259)
N6: (65.098,44.837,-0.195)
N7: (65.487,41.811,-0.694)
N9: (66.820,41.151,-2.386)
O5': (66.211,37.642,-0.960)
O3': (69.851,37.661,-2.280)
Image (generated by PyMOL):