ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1IL2:C6:C7

Extra

PDB:
ATOM 1 O3' G A 5 14.262 35.202 -2.142 1.00 66.02 O
ATOM 2 P A A 6 15.543 36.093 -1.747 1.00 63.50 P
ATOM 3 OP1 A A 6 15.069 37.397 -1.219 1.00 66.68 O
ATOM 4 OP2 A A 6 16.490 36.053 -2.892 1.00 58.91 O
ATOM 5 O5' A A 6 16.228 35.300 -0.549 1.00 62.79 O
ATOM 6 C5' A A 6 15.468 34.900 0.607 1.00 56.02 C
ATOM 7 C4' A A 6 16.348 34.122 1.545 1.00 51.63 C
ATOM 8 O4' A A 6 16.885 32.989 0.813 1.00 50.96 O
ATOM 9 C3' A A 6 17.544 34.896 2.092 1.00 50.22 C
ATOM 10 O3' A A 6 17.862 34.415 3.393 1.00 50.09 O
ATOM 11 C2' A A 6 18.681 34.468 1.173 1.00 54.18 C
ATOM 12 O2' A A 6 19.928 34.503 1.841 1.00 59.01 O
ATOM 13 C1' A A 6 18.295 33.025 0.866 1.00 53.70 C
ATOM 14 N9 A A 6 18.829 32.489 -0.390 1.00 54.37 N
ATOM 15 C8 A A 6 18.568 32.856 -1.692 1.00 53.25 C
ATOM 16 N7 A A 6 19.237 32.155 -2.585 1.00 50.32 N
ATOM 17 C5 A A 6 19.988 31.270 -1.813 1.00 49.23 C
ATOM 18 C6 A A 6 20.915 30.262 -2.156 1.00 42.89 C
ATOM 19 N6 A A 6 21.265 29.971 -3.405 1.00 44.30 N
ATOM 20 N1 A A 6 21.474 29.555 -1.147 1.00 38.51 N
ATOM 21 C2 A A 6 21.138 29.856 0.114 1.00 42.79 C
ATOM 22 N3 A A 6 20.290 30.786 0.563 1.00 46.17 N
ATOM 23 C4 A A 6 19.746 31.465 -0.464 1.00 52.49 C
ATOM 24 P U A 7 17.167 35.066 4.681 1.00 45.30 P
ATOM 25 OP1 U A 7 17.764 34.473 5.909 1.00 46.20 O
ATOM 26 OP2 U A 7 15.696 34.987 4.467 1.00 43.11 O
ATOM 27 O5' U A 7 17.631 36.585 4.608 1.00 53.95 O
TER

ATOM 1 O3' A B 6 17.862 34.415 3.393 1.00 50.09 O
ATOM 2 P U B 7 17.167 35.066 4.681 1.00 45.30 P
ATOM 3 OP1 U B 7 17.764 34.473 5.909 1.00 46.20 O
ATOM 4 OP2 U B 7 15.696 34.987 4.467 1.00 43.11 O
ATOM 5 O5' U B 7 17.631 36.585 4.608 1.00 53.95 O
ATOM 6 C5' U B 7 18.979 36.960 4.941 1.00 50.08 C
ATOM 7 C4' U B 7 18.988 38.353 5.499 1.00 48.71 C
ATOM 8 O4' U B 7 18.617 39.287 4.452 1.00 48.39 O
ATOM 9 C3' U B 7 17.968 38.572 6.604 1.00 48.51 C
ATOM 10 O3' U B 7 18.521 38.231 7.868 1.00 50.33 O
ATOM 11 C2' U B 7 17.692 40.063 6.497 1.00 48.30 C
ATOM 12 O2' U B 7 18.720 40.789 7.133 1.00 48.87 O
ATOM 13 C1' U B 7 17.780 40.291 4.986 1.00 46.31 C
ATOM 14 N1 U B 7 16.481 40.182 4.312 1.00 47.99 N
ATOM 15 C2 U B 7 15.548 41.171 4.538 1.00 49.95 C
ATOM 16 O2 U B 7 15.762 42.122 5.263 1.00 58.62 O
ATOM 17 N3 U B 7 14.353 41.005 3.880 1.00 51.49 N
ATOM 18 C4 U B 7 14.010 39.968 3.031 1.00 53.65 C
ATOM 19 O4 U B 7 12.875 39.927 2.539 1.00 49.23 O
ATOM 20 C5 U B 7 15.038 38.991 2.847 1.00 51.66 C
ATOM 21 C6 U B 7 16.206 39.127 3.481 1.00 47.43 C
ATOM 22 P A B 8 17.645 37.406 8.939 1.00 47.23 P
ATOM 23 OP1 A B 8 18.611 36.548 9.675 1.00 45.63 O
ATOM 24 OP2 A B 8 16.476 36.793 8.253 1.00 47.23 O
ATOM 25 O5' A B 8 17.086 38.511 9.937 1.00 48.95 O
TER

Atoms:
OP1: (15.069,37.397,-1.219)
OP2: (16.490,36.053,-2.892)
C3': (17.544,34.896,2.092)
C1': (18.295,33.025,0.866)
C5': (15.468,34.900,0.607)
O4': (16.885,32.989,0.813)
C8: (18.568,32.856,-1.692)
O2': (19.928,34.503,1.841)
C6: (20.915,30.262,-2.156)
C5: (19.988,31.270,-1.813)
C4: (19.746,31.465,-0.464)
P: (15.543,36.093,-1.747)
C4': (16.348,34.122,1.545)
C2': (18.681,34.468,1.173)
C2: (21.138,29.856,0.114)
N1: (21.474,29.555,-1.147)
N3: (20.290,30.786,0.563)
N6: (21.265,29.971,-3.405)
N7: (19.237,32.155,-2.585)
N9: (18.829,32.489,-0.390)
O5': (16.228,35.300,-0.549)
O3': (17.862,34.415,3.393)
C4: (14.010,39.968,3.031)
N3: (14.353,41.005,3.880)
OP1: (17.764,34.473,5.909)
OP2: (15.696,34.987,4.467)
C2: (15.548,41.171,4.538)
C1': (17.780,40.291,4.986)
C3': (17.968,38.572,6.604)
O5': (17.631,36.585,4.608)
O4': (18.617,39.287,4.452)
C5': (18.979,36.960,4.941)
P: (17.167,35.066,4.681)
C4': (18.988,38.353,5.499)
C2': (17.692,40.063,6.497)
O2': (18.720,40.789,7.133)
N1: (16.481,40.182,4.312)
O4: (12.875,39.927,2.539)
O2: (15.762,42.122,5.263)
C6: (16.206,39.127,3.481)
C5: (15.038,38.991,2.847)
O3': (18.521,38.231,7.868)
Image (generated by PyMOL):
PyMOL image
show in jmol