Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J1U:B6:B7
Extra
PDB:
ATOM 1 O3' G A 5 -4.560 31.984 83.819 1.00 50.11 O
ATOM 2 P G A 6 -5.326 32.916 84.926 1.00 50.40 P
ATOM 3 OP1 G A 6 -5.690 32.000 86.037 1.00 50.04 O
ATOM 4 OP2 G A 6 -6.368 33.720 84.294 1.00 48.94 O
ATOM 5 O5' G A 6 -4.196 33.929 85.450 1.00 49.75 O
ATOM 6 C5' G A 6 -2.942 33.460 86.026 1.00 35.02 C
ATOM 7 C4' G A 6 -2.118 34.670 86.462 1.00 37.88 C
ATOM 8 O4' G A 6 -1.804 35.514 85.331 1.00 35.97 O
ATOM 9 C3' G A 6 -2.903 35.498 87.470 1.00 39.47 C
ATOM 10 O3' G A 6 -1.964 35.914 88.498 1.00 40.21 O
ATOM 11 C2' G A 6 -3.330 36.759 86.704 1.00 36.28 C
ATOM 12 O2' G A 6 -3.414 37.920 87.510 1.00 36.42 O
ATOM 13 C1' G A 6 -2.278 36.845 85.567 1.00 37.73 C
ATOM 14 N9 G A 6 -2.864 37.372 84.342 1.00 33.89 N
ATOM 15 C8 G A 6 -3.803 36.762 83.562 1.00 35.59 C
ATOM 16 N7 G A 6 -4.226 37.526 82.580 1.00 41.15 N
ATOM 17 C5 G A 6 -3.518 38.711 82.721 1.00 31.18 C
ATOM 18 C6 G A 6 -3.595 39.940 81.985 1.00 37.07 C
ATOM 19 O6 G A 6 -4.307 40.204 81.001 1.00 36.80 O
ATOM 20 N1 G A 6 -2.713 40.909 82.513 1.00 34.11 N
ATOM 21 C2 G A 6 -1.889 40.708 83.601 1.00 30.77 C
ATOM 22 N2 G A 6 -1.101 41.722 83.997 1.00 34.11 N
ATOM 23 N3 G A 6 -1.831 39.591 84.272 1.00 31.85 N
ATOM 24 C4 G A 6 -2.651 38.634 83.781 1.00 39.17 C
ATOM 25 P U A 7 -1.743 35.064 89.802 1.00 48.53 P
ATOM 26 OP1 U A 7 -0.777 35.747 90.616 1.00 49.34 O
ATOM 27 OP2 U A 7 -1.546 33.629 89.432 1.00 50.84 O
ATOM 28 O5' U A 7 -3.119 35.157 90.614 1.00 50.25 O
TER
ATOM 1 O3' G B 6 -1.964 35.914 88.498 1.00 40.21 O
ATOM 2 P U B 7 -1.743 35.064 89.802 1.00 48.53 P
ATOM 3 OP1 U B 7 -0.777 35.747 90.616 1.00 49.34 O
ATOM 4 OP2 U B 7 -1.546 33.629 89.432 1.00 50.84 O
ATOM 5 O5' U B 7 -3.119 35.157 90.614 1.00 50.25 O
ATOM 6 C5' U B 7 -3.708 36.419 90.952 1.00 41.33 C
ATOM 7 C4' U B 7 -4.589 36.288 92.150 1.00 39.26 C
ATOM 8 O4' U B 7 -5.789 35.548 91.859 1.00 39.96 O
ATOM 9 C3' U B 7 -3.994 35.591 93.361 1.00 34.32 C
ATOM 10 O3' U B 7 -3.308 36.602 94.093 1.00 44.54 O
ATOM 11 C2' U B 7 -5.248 35.181 94.117 1.00 36.25 C
ATOM 12 O2' U B 7 -5.819 36.384 94.583 1.00 41.52 O
ATOM 13 C1' U B 7 -6.137 34.721 92.959 1.00 44.38 C
ATOM 14 N1 U B 7 -5.985 33.310 92.541 1.00 41.73 N
ATOM 15 C2 U B 7 -6.705 32.389 93.222 1.00 37.83 C
ATOM 16 O2 U B 7 -7.502 32.686 94.116 1.00 43.26 O
ATOM 17 N3 U B 7 -6.527 31.096 92.814 1.00 39.21 N
ATOM 18 C4 U B 7 -5.731 30.635 91.787 1.00 48.92 C
ATOM 19 O4 U B 7 -5.686 29.422 91.570 1.00 47.33 O
ATOM 20 C5 U B 7 -5.016 31.648 91.086 1.00 40.94 C
ATOM 21 C6 U B 7 -5.156 32.935 91.487 1.00 47.62 C
ATOM 22 P A B 8 -1.820 36.302 94.665 1.00 45.46 P
ATOM 23 OP1 A B 8 -1.312 37.538 95.254 1.00 45.06 O
ATOM 24 OP2 A B 8 -1.067 35.612 93.599 1.00 46.92 O
ATOM 25 O5' A B 8 -2.036 35.315 95.886 1.00 42.45 O
TER
ATOM 2 P G A 6 -5.326 32.916 84.926 1.00 50.40 P
ATOM 3 OP1 G A 6 -5.690 32.000 86.037 1.00 50.04 O
ATOM 4 OP2 G A 6 -6.368 33.720 84.294 1.00 48.94 O
ATOM 5 O5' G A 6 -4.196 33.929 85.450 1.00 49.75 O
ATOM 6 C5' G A 6 -2.942 33.460 86.026 1.00 35.02 C
ATOM 7 C4' G A 6 -2.118 34.670 86.462 1.00 37.88 C
ATOM 8 O4' G A 6 -1.804 35.514 85.331 1.00 35.97 O
ATOM 9 C3' G A 6 -2.903 35.498 87.470 1.00 39.47 C
ATOM 10 O3' G A 6 -1.964 35.914 88.498 1.00 40.21 O
ATOM 11 C2' G A 6 -3.330 36.759 86.704 1.00 36.28 C
ATOM 12 O2' G A 6 -3.414 37.920 87.510 1.00 36.42 O
ATOM 13 C1' G A 6 -2.278 36.845 85.567 1.00 37.73 C
ATOM 14 N9 G A 6 -2.864 37.372 84.342 1.00 33.89 N
ATOM 15 C8 G A 6 -3.803 36.762 83.562 1.00 35.59 C
ATOM 16 N7 G A 6 -4.226 37.526 82.580 1.00 41.15 N
ATOM 17 C5 G A 6 -3.518 38.711 82.721 1.00 31.18 C
ATOM 18 C6 G A 6 -3.595 39.940 81.985 1.00 37.07 C
ATOM 19 O6 G A 6 -4.307 40.204 81.001 1.00 36.80 O
ATOM 20 N1 G A 6 -2.713 40.909 82.513 1.00 34.11 N
ATOM 21 C2 G A 6 -1.889 40.708 83.601 1.00 30.77 C
ATOM 22 N2 G A 6 -1.101 41.722 83.997 1.00 34.11 N
ATOM 23 N3 G A 6 -1.831 39.591 84.272 1.00 31.85 N
ATOM 24 C4 G A 6 -2.651 38.634 83.781 1.00 39.17 C
ATOM 25 P U A 7 -1.743 35.064 89.802 1.00 48.53 P
ATOM 26 OP1 U A 7 -0.777 35.747 90.616 1.00 49.34 O
ATOM 27 OP2 U A 7 -1.546 33.629 89.432 1.00 50.84 O
ATOM 28 O5' U A 7 -3.119 35.157 90.614 1.00 50.25 O
TER
ATOM 1 O3' G B 6 -1.964 35.914 88.498 1.00 40.21 O
ATOM 2 P U B 7 -1.743 35.064 89.802 1.00 48.53 P
ATOM 3 OP1 U B 7 -0.777 35.747 90.616 1.00 49.34 O
ATOM 4 OP2 U B 7 -1.546 33.629 89.432 1.00 50.84 O
ATOM 5 O5' U B 7 -3.119 35.157 90.614 1.00 50.25 O
ATOM 6 C5' U B 7 -3.708 36.419 90.952 1.00 41.33 C
ATOM 7 C4' U B 7 -4.589 36.288 92.150 1.00 39.26 C
ATOM 8 O4' U B 7 -5.789 35.548 91.859 1.00 39.96 O
ATOM 9 C3' U B 7 -3.994 35.591 93.361 1.00 34.32 C
ATOM 10 O3' U B 7 -3.308 36.602 94.093 1.00 44.54 O
ATOM 11 C2' U B 7 -5.248 35.181 94.117 1.00 36.25 C
ATOM 12 O2' U B 7 -5.819 36.384 94.583 1.00 41.52 O
ATOM 13 C1' U B 7 -6.137 34.721 92.959 1.00 44.38 C
ATOM 14 N1 U B 7 -5.985 33.310 92.541 1.00 41.73 N
ATOM 15 C2 U B 7 -6.705 32.389 93.222 1.00 37.83 C
ATOM 16 O2 U B 7 -7.502 32.686 94.116 1.00 43.26 O
ATOM 17 N3 U B 7 -6.527 31.096 92.814 1.00 39.21 N
ATOM 18 C4 U B 7 -5.731 30.635 91.787 1.00 48.92 C
ATOM 19 O4 U B 7 -5.686 29.422 91.570 1.00 47.33 O
ATOM 20 C5 U B 7 -5.016 31.648 91.086 1.00 40.94 C
ATOM 21 C6 U B 7 -5.156 32.935 91.487 1.00 47.62 C
ATOM 22 P A B 8 -1.820 36.302 94.665 1.00 45.46 P
ATOM 23 OP1 A B 8 -1.312 37.538 95.254 1.00 45.06 O
ATOM 24 OP2 A B 8 -1.067 35.612 93.599 1.00 46.92 O
ATOM 25 O5' A B 8 -2.036 35.315 95.886 1.00 42.45 O
TER
Atoms:
OP1: (-5.690,32.000,86.037)
OP2: (-6.368,33.720,84.294)
C3': (-2.903,35.498,87.470)
C1': (-2.278,36.845,85.567)
C5': (-2.942,33.460,86.026)
O6: (-4.307,40.204,81.001)
O4': (-1.804,35.514,85.331)
C8: (-3.803,36.762,83.562)
C2: (-1.889,40.708,83.601)
C6: (-3.595,39.940,81.985)
C5: (-3.518,38.711,82.721)
C4: (-2.651,38.634,83.781)
P: (-5.326,32.916,84.926)
C4': (-2.118,34.670,86.462)
C2': (-3.330,36.759,86.704)
O2': (-3.414,37.920,87.510)
N1: (-2.713,40.909,82.513)
N2: (-1.101,41.722,83.997)
N3: (-1.831,39.591,84.272)
N7: (-4.226,37.526,82.580)
N9: (-2.864,37.372,84.342)
O5': (-4.196,33.929,85.450)
O3': (-1.964,35.914,88.498)
OP2: (-6.368,33.720,84.294)
C3': (-2.903,35.498,87.470)
C1': (-2.278,36.845,85.567)
C5': (-2.942,33.460,86.026)
O6: (-4.307,40.204,81.001)
O4': (-1.804,35.514,85.331)
C8: (-3.803,36.762,83.562)
C2: (-1.889,40.708,83.601)
C6: (-3.595,39.940,81.985)
C5: (-3.518,38.711,82.721)
C4: (-2.651,38.634,83.781)
P: (-5.326,32.916,84.926)
C4': (-2.118,34.670,86.462)
C2': (-3.330,36.759,86.704)
O2': (-3.414,37.920,87.510)
N1: (-2.713,40.909,82.513)
N2: (-1.101,41.722,83.997)
N3: (-1.831,39.591,84.272)
N7: (-4.226,37.526,82.580)
N9: (-2.864,37.372,84.342)
O5': (-4.196,33.929,85.450)
O3': (-1.964,35.914,88.498)
C4: (-5.731,30.635,91.787)
N3: (-6.527,31.096,92.814)
OP1: (-0.777,35.747,90.616)
OP2: (-1.546,33.629,89.432)
C2: (-6.705,32.389,93.222)
C1': (-6.137,34.721,92.959)
C3': (-3.994,35.591,93.361)
O5': (-3.119,35.157,90.614)
O4': (-5.789,35.548,91.859)
C5': (-3.708,36.419,90.952)
P: (-1.743,35.064,89.802)
C4': (-4.589,36.288,92.150)
C2': (-5.248,35.181,94.117)
O2': (-5.819,36.384,94.583)
N1: (-5.985,33.310,92.541)
O4: (-5.686,29.422,91.570)
O2: (-7.502,32.686,94.116)
C6: (-5.156,32.935,91.487)
C5: (-5.016,31.648,91.086)
O3': (-3.308,36.602,94.093)
N3: (-6.527,31.096,92.814)
OP1: (-0.777,35.747,90.616)
OP2: (-1.546,33.629,89.432)
C2: (-6.705,32.389,93.222)
C1': (-6.137,34.721,92.959)
C3': (-3.994,35.591,93.361)
O5': (-3.119,35.157,90.614)
O4': (-5.789,35.548,91.859)
C5': (-3.708,36.419,90.952)
P: (-1.743,35.064,89.802)
C4': (-4.589,36.288,92.150)
C2': (-5.248,35.181,94.117)
O2': (-5.819,36.384,94.583)
N1: (-5.985,33.310,92.541)
O4: (-5.686,29.422,91.570)
O2: (-7.502,32.686,94.116)
C6: (-5.156,32.935,91.487)
C5: (-5.016,31.648,91.086)
O3': (-3.308,36.602,94.093)
Image (generated by PyMOL):