Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RD2:B5:B6
Extra
PDB:
ATOM 1 O3' U A 4 27.157 32.959 28.581 1.00 57.59 O
ATOM 2 P A A 5 25.759 32.710 29.345 1.00 60.79 P
ATOM 3 OP1 A A 5 24.707 32.683 28.299 1.00 56.92 O
ATOM 4 OP2 A A 5 25.669 33.694 30.453 1.00 55.73 O
ATOM 5 O5' A A 5 25.919 31.260 29.994 1.00 61.54 O
ATOM 6 C5' A A 5 24.999 30.765 30.971 1.00 59.04 C
ATOM 7 C4' A A 5 25.716 30.563 32.285 1.00 60.56 C
ATOM 8 O4' A A 5 26.379 31.802 32.596 1.00 58.76 O
ATOM 9 C3' A A 5 24.853 30.238 33.509 1.00 69.31 C
ATOM 10 O3' A A 5 24.895 28.843 33.874 1.00 70.06 O
ATOM 11 C2' A A 5 25.591 30.917 34.677 1.00 68.05 C
ATOM 12 O2' A A 5 26.327 30.006 35.467 1.00 85.48 O
ATOM 13 C1' A A 5 26.581 31.856 33.984 1.00 63.32 C
ATOM 14 N9 A A 5 26.646 33.246 34.431 1.00 55.43 N
ATOM 15 C8 A A 5 26.500 34.399 33.698 1.00 58.90 C
ATOM 16 N7 A A 5 26.718 35.492 34.387 1.00 61.37 N
ATOM 17 C5 A A 5 27.007 35.028 35.664 1.00 57.49 C
ATOM 18 C6 A A 5 27.350 35.688 36.858 1.00 60.62 C
ATOM 19 N6 A A 5 27.487 37.013 36.961 1.00 59.67 N
ATOM 20 N1 A A 5 27.562 34.928 37.956 1.00 65.86 N
ATOM 21 C2 A A 5 27.445 33.597 37.847 1.00 63.44 C
ATOM 22 N3 A A 5 27.145 32.863 36.781 1.00 58.39 N
ATOM 23 C4 A A 5 26.938 33.648 35.710 1.00 57.89 C
ATOM 24 P U A 6 24.382 27.687 32.871 1.00 56.70 P
ATOM 25 OP1 U A 6 24.601 26.392 33.580 1.00 47.10 O
ATOM 26 OP2 U A 6 25.000 27.899 31.537 1.00 52.73 O
ATOM 27 O5' U A 6 22.807 27.914 32.761 1.00 57.57 O
TER
ATOM 1 O3' A B 5 24.895 28.843 33.874 1.00 70.06 O
ATOM 2 P U B 6 24.382 27.687 32.871 1.00 56.70 P
ATOM 3 OP1 U B 6 24.601 26.392 33.580 1.00 47.10 O
ATOM 4 OP2 U B 6 25.000 27.899 31.537 1.00 52.73 O
ATOM 5 O5' U B 6 22.807 27.914 32.761 1.00 57.57 O
ATOM 6 C5' U B 6 21.987 27.876 33.925 1.00 57.83 C
ATOM 7 C4' U B 6 20.614 27.340 33.591 1.00 54.41 C
ATOM 8 O4' U B 6 20.039 28.146 32.523 1.00 48.92 O
ATOM 9 C3' U B 6 20.524 25.931 33.024 1.00 54.15 C
ATOM 10 O3' U B 6 20.597 24.918 34.023 1.00 62.97 O
ATOM 11 C2' U B 6 19.138 25.966 32.399 1.00 54.68 C
ATOM 12 O2' U B 6 18.127 25.933 33.386 1.00 56.79 O
ATOM 13 C1' U B 6 19.149 27.350 31.752 1.00 53.97 C
ATOM 14 N1 U B 6 19.645 27.303 30.371 1.00 56.75 N
ATOM 15 C2 U B 6 18.759 26.899 29.387 1.00 59.25 C
ATOM 16 O2 U B 6 17.600 26.605 29.623 1.00 64.26 O
ATOM 17 N3 U B 6 19.282 26.856 28.118 1.00 57.39 N
ATOM 18 C4 U B 6 20.572 27.172 27.742 1.00 54.40 C
ATOM 19 O4 U B 6 20.892 27.085 26.558 1.00 63.91 O
ATOM 20 C5 U B 6 21.426 27.587 28.816 1.00 54.77 C
ATOM 21 C6 U B 6 20.946 27.638 30.062 1.00 60.27 C
ATOM 22 P C B 7 21.448 23.581 33.732 1.00 74.71 P
ATOM 23 OP1 C B 7 22.596 23.535 34.680 1.00 68.10 O
ATOM 24 OP2 C B 7 21.708 23.551 32.265 1.00 64.28 O
ATOM 25 O5' C B 7 20.460 22.380 34.095 1.00 82.35 O
TER
ATOM 2 P A A 5 25.759 32.710 29.345 1.00 60.79 P
ATOM 3 OP1 A A 5 24.707 32.683 28.299 1.00 56.92 O
ATOM 4 OP2 A A 5 25.669 33.694 30.453 1.00 55.73 O
ATOM 5 O5' A A 5 25.919 31.260 29.994 1.00 61.54 O
ATOM 6 C5' A A 5 24.999 30.765 30.971 1.00 59.04 C
ATOM 7 C4' A A 5 25.716 30.563 32.285 1.00 60.56 C
ATOM 8 O4' A A 5 26.379 31.802 32.596 1.00 58.76 O
ATOM 9 C3' A A 5 24.853 30.238 33.509 1.00 69.31 C
ATOM 10 O3' A A 5 24.895 28.843 33.874 1.00 70.06 O
ATOM 11 C2' A A 5 25.591 30.917 34.677 1.00 68.05 C
ATOM 12 O2' A A 5 26.327 30.006 35.467 1.00 85.48 O
ATOM 13 C1' A A 5 26.581 31.856 33.984 1.00 63.32 C
ATOM 14 N9 A A 5 26.646 33.246 34.431 1.00 55.43 N
ATOM 15 C8 A A 5 26.500 34.399 33.698 1.00 58.90 C
ATOM 16 N7 A A 5 26.718 35.492 34.387 1.00 61.37 N
ATOM 17 C5 A A 5 27.007 35.028 35.664 1.00 57.49 C
ATOM 18 C6 A A 5 27.350 35.688 36.858 1.00 60.62 C
ATOM 19 N6 A A 5 27.487 37.013 36.961 1.00 59.67 N
ATOM 20 N1 A A 5 27.562 34.928 37.956 1.00 65.86 N
ATOM 21 C2 A A 5 27.445 33.597 37.847 1.00 63.44 C
ATOM 22 N3 A A 5 27.145 32.863 36.781 1.00 58.39 N
ATOM 23 C4 A A 5 26.938 33.648 35.710 1.00 57.89 C
ATOM 24 P U A 6 24.382 27.687 32.871 1.00 56.70 P
ATOM 25 OP1 U A 6 24.601 26.392 33.580 1.00 47.10 O
ATOM 26 OP2 U A 6 25.000 27.899 31.537 1.00 52.73 O
ATOM 27 O5' U A 6 22.807 27.914 32.761 1.00 57.57 O
TER
ATOM 1 O3' A B 5 24.895 28.843 33.874 1.00 70.06 O
ATOM 2 P U B 6 24.382 27.687 32.871 1.00 56.70 P
ATOM 3 OP1 U B 6 24.601 26.392 33.580 1.00 47.10 O
ATOM 4 OP2 U B 6 25.000 27.899 31.537 1.00 52.73 O
ATOM 5 O5' U B 6 22.807 27.914 32.761 1.00 57.57 O
ATOM 6 C5' U B 6 21.987 27.876 33.925 1.00 57.83 C
ATOM 7 C4' U B 6 20.614 27.340 33.591 1.00 54.41 C
ATOM 8 O4' U B 6 20.039 28.146 32.523 1.00 48.92 O
ATOM 9 C3' U B 6 20.524 25.931 33.024 1.00 54.15 C
ATOM 10 O3' U B 6 20.597 24.918 34.023 1.00 62.97 O
ATOM 11 C2' U B 6 19.138 25.966 32.399 1.00 54.68 C
ATOM 12 O2' U B 6 18.127 25.933 33.386 1.00 56.79 O
ATOM 13 C1' U B 6 19.149 27.350 31.752 1.00 53.97 C
ATOM 14 N1 U B 6 19.645 27.303 30.371 1.00 56.75 N
ATOM 15 C2 U B 6 18.759 26.899 29.387 1.00 59.25 C
ATOM 16 O2 U B 6 17.600 26.605 29.623 1.00 64.26 O
ATOM 17 N3 U B 6 19.282 26.856 28.118 1.00 57.39 N
ATOM 18 C4 U B 6 20.572 27.172 27.742 1.00 54.40 C
ATOM 19 O4 U B 6 20.892 27.085 26.558 1.00 63.91 O
ATOM 20 C5 U B 6 21.426 27.587 28.816 1.00 54.77 C
ATOM 21 C6 U B 6 20.946 27.638 30.062 1.00 60.27 C
ATOM 22 P C B 7 21.448 23.581 33.732 1.00 74.71 P
ATOM 23 OP1 C B 7 22.596 23.535 34.680 1.00 68.10 O
ATOM 24 OP2 C B 7 21.708 23.551 32.265 1.00 64.28 O
ATOM 25 O5' C B 7 20.460 22.380 34.095 1.00 82.35 O
TER
Atoms:
OP1: (24.707,32.683,28.299)
OP2: (25.669,33.694,30.453)
C3': (24.853,30.238,33.509)
C1': (26.581,31.856,33.984)
C5': (24.999,30.765,30.971)
O4': (26.379,31.802,32.596)
C8: (26.500,34.399,33.698)
O2': (26.327,30.006,35.467)
C6: (27.350,35.688,36.858)
C5: (27.007,35.028,35.664)
C4: (26.938,33.648,35.710)
P: (25.759,32.710,29.345)
C4': (25.716,30.563,32.285)
C2': (25.591,30.917,34.677)
C2: (27.445,33.597,37.847)
N1: (27.562,34.928,37.956)
N3: (27.145,32.863,36.781)
N6: (27.487,37.013,36.961)
N7: (26.718,35.492,34.387)
N9: (26.646,33.246,34.431)
O5': (25.919,31.260,29.994)
O3': (24.895,28.843,33.874)
OP2: (25.669,33.694,30.453)
C3': (24.853,30.238,33.509)
C1': (26.581,31.856,33.984)
C5': (24.999,30.765,30.971)
O4': (26.379,31.802,32.596)
C8: (26.500,34.399,33.698)
O2': (26.327,30.006,35.467)
C6: (27.350,35.688,36.858)
C5: (27.007,35.028,35.664)
C4: (26.938,33.648,35.710)
P: (25.759,32.710,29.345)
C4': (25.716,30.563,32.285)
C2': (25.591,30.917,34.677)
C2: (27.445,33.597,37.847)
N1: (27.562,34.928,37.956)
N3: (27.145,32.863,36.781)
N6: (27.487,37.013,36.961)
N7: (26.718,35.492,34.387)
N9: (26.646,33.246,34.431)
O5': (25.919,31.260,29.994)
O3': (24.895,28.843,33.874)
C4: (20.572,27.172,27.742)
N3: (19.282,26.856,28.118)
OP1: (24.601,26.392,33.580)
OP2: (25.000,27.899,31.537)
C2: (18.759,26.899,29.387)
C1': (19.149,27.350,31.752)
C3': (20.524,25.931,33.024)
O5': (22.807,27.914,32.761)
O4': (20.039,28.146,32.523)
C5': (21.987,27.876,33.925)
P: (24.382,27.687,32.871)
C4': (20.614,27.340,33.591)
C2': (19.138,25.966,32.399)
O2': (18.127,25.933,33.386)
N1: (19.645,27.303,30.371)
O4: (20.892,27.085,26.558)
O2: (17.600,26.605,29.623)
C6: (20.946,27.638,30.062)
C5: (21.426,27.587,28.816)
O3': (20.597,24.918,34.023)
N3: (19.282,26.856,28.118)
OP1: (24.601,26.392,33.580)
OP2: (25.000,27.899,31.537)
C2: (18.759,26.899,29.387)
C1': (19.149,27.350,31.752)
C3': (20.524,25.931,33.024)
O5': (22.807,27.914,32.761)
O4': (20.039,28.146,32.523)
C5': (21.987,27.876,33.925)
P: (24.382,27.687,32.871)
C4': (20.614,27.340,33.591)
C2': (19.138,25.966,32.399)
O2': (18.127,25.933,33.386)
N1: (19.645,27.303,30.371)
O4: (20.892,27.085,26.558)
O2: (17.600,26.605,29.623)
C6: (20.946,27.638,30.062)
C5: (21.426,27.587,28.816)
O3': (20.597,24.918,34.023)
Image (generated by PyMOL):